{
    "tag": 7720,
    "title": "Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data",
    "pubdate": "20170321",
    "sername": null,
    "series_name": null,
    "issue": null,
    "publish": null,
    "publisher_name": null,
    "onlink": "https:\/\/cmgds.marine.usgs.gov\/catalog\/spcmsc\/Cold_water_coral_microbiomes_Lophelia_pertusa_from_Gulf_of_Mexico_and_Atlantic_Ocean_raw_data.faq.html",
    "format": null,
    "email": null,
    "descript": "The files in this data release are the raw deoxyribonucleic acid (DNA) sequence files referenced in the submitted journal article by Christina A. Kellogg, Dawn B. Goldsmith and Michael A. Gray entitled \"Biogeographic comparison of\u00a0Lophelia-associated bacterial communities in the western Atlantic reveals conserved core microbiome\".  They represent a 16S ribosomal ribonucleic acid (rRNA) gene amplicon survey of the coral\u2019s microbiomes completed using Roche 454 pyrosequencing with Titanium series reagents.  Samples from the Gulf of Mexico were collected in 2009 and 2010.  Samples from the Atlantic Ocean were collected in 2009.  The raw data files associated with this study have also been submitted to the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under Bioproject number PRJNA305617.  Minimum information about a marker gene (MIMARKS) compliant metadata is provided in \"Lophelia metadata\", which is included in the data download file. For more information, please contact Christina Kellogg at the U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center, 600 4th Street South, St. Petersburg, Florida, USA, 33701; Telephone: (727) 502-8128; email: ckellogg@usgs.gov.",
    "lang": null,
    "journal": null,
    "pwid": null,
    "originator": [
        {
            "name": "Kellogg, Christina A.",
            "role": "Author"
        },
        {
            "name": "Goldsmith, Dawn B.",
            "role": "Author"
        }
    ],
    "index_term": [
        {
            "thcode": 2,
            "code": "89",
            "name": "biochemistry",
            "scope": "Study of chemical processes that occur within or are mediated by living organisms."
        },
        {
            "thcode": 2,
            "code": "177",
            "name": "coelenterates",
            "scope": "Freshwater and marine invertebrates, such as corals, jellyfish, and sea anemones, belonging to the phylum Coelenterata and living as sedentary polyps or free swimming medusae."
        },
        {
            "thcode": 2,
            "code": "276",
            "name": "DNA sequencing",
            "scope": "Biochemical procedure to determine the order of nucleotides in genes."
        },
        {
            "thcode": 2,
            "code": "702",
            "name": "marine biology",
            "scope": "Branch of biology concerned with the organisms and habitats of the seas and oceans."
        },
        {
            "thcode": 2,
            "code": "706",
            "name": "marine geology",
            "scope": "Branch of geology concerned with the composition, geologic history, and earth processes of the ocean floor and the continental margin."
        },
        {
            "thcode": 15,
            "code": "002",
            "name": "biota",
            "scope": "Flora or fauna in natural environment, for example wildlife, vegetation, biological sciences, ecology, wilderness, sea life, wetlands, habitat, biological resources"
        },
        {
            "thcode": 15,
            "code": "007",
            "name": "environment",
            "scope": "Environmental resources, protection and conservation, for example environmental pollution, waste storage and treatment, environmental impact assessment, monitoring environmental risk, nature reserves, landscape, water quality, air quality, environmental modeling"
        },
        {
            "thcode": 15,
            "code": "014",
            "name": "oceans",
            "scope": "Features and characteristics of salt water bodies (excluding inland waters), for example tides, tidal waves, coastal information, reefs, maritime, outer continental shelf submerged lands, shoreline"
        }
    ],
    "place_term": [],
    "image": [],
    "fan": [
        "09DCM01",
        "09DCM02",
        "09DCM03",
        "10DCM01"
    ]
}