Surface sediment grain size distributions derived from automated image processing of in situ seafloor images from the lower Columbia River, Washington and Oregon, 2021

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Frequently anticipated questions:


What does this data set describe?

Title:
Surface sediment grain size distributions derived from automated image processing of in situ seafloor images from the lower Columbia River, Washington and Oregon, 2021
Abstract:
This dataset contains surface sediment grain size distributions derived from automated image processing of in situ seafloor images obtained with an underwater camera system at four sites (SKM, SLG, LDB, WLW) in the lower Columbia River, Washington and Oregon, in 2021. The surface sediment grain size distribution data are provided in comma-separated text (.csv) format for each site and for data used in calibration and validation of the automated image processing technique.
Supplemental_Information:
Additional information about the field activity or activities from which these data were derived is available online at: https://cmgds.marine.usgs.gov/fan_info.php?fan=2021-621-FA Any use of trade, product, or firm names is for descriptive purposes only and does not imply endorsement by the U.S. Government.
  1. How might this data set be cited?
    Stevens, Andrew W., Warrick, Jonathan A., Hatcher, Gerald A., Ferro, Peter Dal, Dartnell, Peter, Cohn, Nicholas, and Moritz, Hans R., 20230808, Surface sediment grain size distributions derived from automated image processing of in situ seafloor images from the lower Columbia River, Washington and Oregon, 2021: data release DOI:10.5066/10.5066/P92U1KPY, U.S. Geological Survey, Pacific Coastal and Marine Science Center, Santa Cruz, California.

    Online Links:

    This is part of the following larger work.

    Stevens, Andrew W., Hatcher, Gerald A., Ferro, Peter Dal, Dartnell, Peter, Warrick, Jonathan A., Cohn, Nicholas, and Moritz, Hans R., 2023, Digital seafloor images, sediment grain size, bathymetry, and water velocity data from the lower Columbia River, Washington and Oregon, 2021: data release DOI:10.5066/P92U1KPY, U.S. Geological Survey, Pacific Coastal and Marine Science Center, Santa Cruz, CA.

    Online Links:

    Other_Citation_Details:
    Suggested Citation: Suggested Citation: Stevens, A.W., Hatcher, G.A., Dal Ferro, P., Warrick, J.A., Cohn, N., and Moritz, H.R., 2023, Digital seafloor images, sediment grain size, bathymetry, and water velocity data from the lower Columbia River, Washington and Oregon, 2021: U.S. Geological Survey data release, https://doi.org/10.5066/P92U1KPY.
  2. What geographic area does the data set cover?
    West_Bounding_Coordinate: -123.442574
    East_Bounding_Coordinate: -122.762951
    North_Bounding_Coordinate: 46.250242
    South_Bounding_Coordinate: 45.712673
  3. What does it look like?
    dgs_data_overview.png (PNG)
    Maps showing locations of seafloor images colored by median sediment diameter (d50)
  4. Does the data set describe conditions during a particular time period?
    Beginning_Date: 05-Jun-2021
    Ending_Date: 08-Jun-2021
    Currentness_Reference:
    ground condition at time data were collected
  5. What is the general form of this data set?
    Geospatial_Data_Presentation_Form: comma-delimited text
  6. How does the data set represent geographic features?
    1. How are geographic features stored in the data set?
      This is a Point data set. It contains the following vector data types (SDTS terminology):
      • Point (1402)
    2. What coordinate system is used to represent geographic features?
      Horizontal positions are specified in geographic coordinates, that is, latitude and longitude. Latitudes are given to the nearest 0.000001. Longitudes are given to the nearest 0.000001. Latitude and longitude values are specified in Decimal degrees. The horizontal datum used is WGS_1984.
      The ellipsoid used is WGS_1984.
      The semi-major axis of the ellipsoid used is 6378137.0.
      The flattening of the ellipsoid used is 1/298.257223563.
  7. How does the data set describe geographic features?
    Attribute Table
    Table containing attribute information associated with the dataset (Source: Producer defined)
    image_group
    Classification of group of images (Source: Producer defined)
    ValueDefinition
    CalibrationImages used for image processing technique calibration
    ValidationImage used for image processing technique validation
    ldbImage collected from Lower Dobelbower (ldb) site
    skmImage collected from Skamokawa(skm) site
    slgImage collected from Slaughters Bar (slg) site
    wlwImage collected from Willow Bar (wlw) site
    image_filename
    Filename of image collected (Source: Producer defined) Unique identifier for the image assigned in the field.
    analysis_flag
    Flag to indicate if image was analyzed to estimate grain size distribution or was too coarse or too fine for analysis (Source: Producer defined)
    ValueDefinition
    dgsImage was analyzed to estimate grain size distribution
    coarseGrains in image are too coarse for analysis of grain size distribution
    fineGrains in image are too fine for analysis of grain size distribution
    datetime_utc
    Date and time of image collection in yyyy-mm-dd HH:MM:SS.FFF format (Source: producer defined)
    Range of values
    Minimum:2021-06-05 16:31:45.780
    Maximum:2021-06-08 19:12:46.990
    Units:Dates in yyyy-mm-dd HH:MM:SS.FFF format
    longitude
    Longitude of image in decimal degrees, east. NaN=not a number, because no location of the sample is available. (Source: producer defined)
    Range of values
    Minimum:-123.442574
    Maximum:-122.762951
    Units:decimal degrees
    latitude
    Latitude of image in decimal degrees, north. NaN=not a number, because no location of the sample is available. (Source: producer defined)
    Range of values
    Minimum:45.712673
    Maximum:46.250242
    Units:decimal degrees
    pixel_size_mm
    Size of pixels in image in millimeters (Source: producer defined)
    Range of values
    Minimum:0.00657
    Maximum:0.00657
    Units:millimeters
    max_scale
    Maximum scale input value used in wavelet analysis (Buscombe, 2013) of grain size distribution. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:2.957
    Maximum:20.902
    Units:unitless
    x_fac
    Area-by-number to volume-by-number conversion used in wavelet analysis (Buscombe, 2013) of grain size distribution. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:1.5
    Maximum:1.5
    Units:unitless
    0.0078_mm
    Fraction of sample with grain diameter in 0.0078 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0093_mm
    Fraction of sample with grain diameter in 0.0093 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0111_mm
    Fraction of sample with grain diameter in 0.0111 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0131_mm
    Fraction of sample with grain diameter in 0.0131 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0156_mm
    Fraction of sample with grain diameter in 0.0156 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0186_mm
    Fraction of sample with grain diameter in 0.0186 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0221_mm
    Fraction of sample with grain diameter in 0.0221 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0263_mm
    Fraction of sample with grain diameter in 0.0263 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0312_mm
    Fraction of sample with grain diameter in 0.0312 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0372_mm
    Fraction of sample with grain diameter in 0.0372 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0442_mm
    Fraction of sample with grain diameter in 0.0442 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0526_mm
    Fraction of sample with grain diameter in 0.0526 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0625_mm
    Fraction of sample with grain diameter in 0.0625 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0743_mm
    Fraction of sample with grain diameter in 0.0743 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.0884_mm
    Fraction of sample with grain diameter in 0.0884 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.1051_mm
    Fraction of sample with grain diameter in 0.1051 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.1250_mm
    Fraction of sample with grain diameter in 0.1250 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.1487_mm
    Fraction of sample with grain diameter in 0.1487 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.1768_mm
    Fraction of sample with grain diameter in 0.1768 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.2102_mm
    Fraction of sample with grain diameter in 0.2102 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.2500_mm
    Fraction of sample with grain diameter in 0.2500 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.2973_mm
    Fraction of sample with grain diameter in 0.2973 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.3536_mm
    Fraction of sample with grain diameter in 0.3536 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.4204_mm
    Fraction of sample with grain diameter in 0.4204 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.5000_mm
    Fraction of sample with grain diameter in 0.5000 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.5946_mm
    Fraction of sample with grain diameter in 0.5946 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.7071_mm
    Fraction of sample with grain diameter in 0.7071 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    0.8409_mm
    Fraction of sample with grain diameter in 0.8409 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    1.0000_mm
    Fraction of sample with grain diameter in 1.0000 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    1.1890_mm
    Fraction of sample with grain diameter in 1.1890 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    1.4140_mm
    Fraction of sample with grain diameter in 1.4140 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    1.6820_mm
    Fraction of sample with grain diameter in 1.6820 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    2.0000_mm
    Fraction of sample with grain diameter in 2.0000 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    2.3780_mm
    Fraction of sample with grain diameter in 2.3780 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    2.8280_mm
    Fraction of sample with grain diameter in 2.8280 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    3.3640_mm
    Fraction of sample with grain diameter in 3.3640 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    4.0000_mm
    Fraction of sample with grain diameter in 4.0000 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    4.7570_mm
    Fraction of sample with grain diameter in 4.7570 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    5.6570_mm
    fraction of sample with grain diameter in 5.6570 mm bin. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.00
    Maximum:1.00
    Units:fraction
    gs_mean
    Arithmetic measure of mean grain size. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.211
    Maximum:1.663
    Units:millimeters
    gs_sorting
    Arithmetic measure of grain size sorting. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.092
    Maximum:0.732
    Units:millimeters
    gs_skewness
    Arithmetic measure of grain size skewness. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:-0.145
    Maximum:0.537
    Units:millimeters
    gs_kurtosis
    Arithmetic measure of grain size kurtosis. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:1.721
    Maximum:2.362
    Units:millimeters
    d5_mm
    Grain diameter whereby 5 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.068
    Maximum:0.501
    Units:millimeters
    d10_mm
    Grain diameter whereby 10 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.091
    Maximum:0.675
    Units:millimeters
    d16_mm
    Grain diameter whereby 16 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.111
    Maximum:0.842
    Units:millimeters
    d25_mm
    Grain diameter whereby 25 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.136
    Maximum:1.046
    Units:millimeters
    d30_mm
    Grain diameter whereby 30 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.149
    Maximum:1.156
    Units:millimeters
    d50_mm
    Grain diameter whereby 50 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.197
    Maximum:1.669
    Units:millimeters
    d75_mm
    Grain diameter whereby 75 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.281
    Maximum:2.328
    Units:millimeters
    d84_mm
    Grain diameter whereby 84 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.320
    Maximum:2.513
    Units:millimeters
    d90_mm
    Grain diameter whereby 90 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.347
    Maximum:2.631
    Units:millimeters
    d95_mm
    Grain diameter whereby 95 percent of the cumulative percent of grains are finer than. NaN=not a number, because image was not analyzed for grain size distribution. (Source: producer defined)
    Range of values
    Minimum:0.382
    Maximum:2.730
    Units:millimeters
    Entity_and_Attribute_Overview: The first line of the csv file is a header line.
    Entity_and_Attribute_Detail_Citation: U.S. Geological Survey

Who produced the data set?

  1. Who are the originators of the data set? (may include formal authors, digital compilers, and editors)
    • Andrew W. Stevens
    • Jonathan A. Warrick
    • Gerald A. Hatcher
    • Peter Dal Ferro
    • Peter Dartnell
    • Nicholas Cohn
    • Hans R. Moritz
  2. Who also contributed to the data set?
  3. To whom should users address questions about the data?
    U.S. Geological Survey, Pacific Coastal and Marine Science Center
    Attn: PCMSC Science Data Coordinator
    2885 Mission Street
    Santa Cruz, CA

    831-427-4747 (voice)
    pcmsc_data@usgs.gov

Why was the data set created?

Growth of subaqueous sand dunes commonly causes shoaling in engineered river channels that necessitates costly dredging to maintain adequate depths for navigation. The factors that result in sand wave growth are theoretically understood from laboratory experiments, but the capacity to predict sand wave geometries in field settings is limited due to temporal and spatial variability in hydrodynamics and sediment grain size. Detailed measurements of sand wave geometries, hydrodynamics, and grain size are therefore needed to test and improve numerical models and inform efficient management strategies in navigation channels. This data release presents surface sediment grain size distributions, bathymetry and seafloor acoustic backscatter, and water velocity data acquired at four sites with subaqueous sand dunes in the lower Columbia River, Washington and Oregon, between June 4 and June 9, 2021. The four sites were located between 65 km and 127 km upstream from the ocean inlet along a gradient of relative tidal and fluvial influence. The survey was performed during peak annual river discharge when sediment transport processes were likely active. High resolution digital images were collected at each site with an underwater camera system that was repeatedly lowered to the seabed along a series of 1 km-long transects oriented along the main navigation channel and spaced about 60 m apart. The grain size distributions of the seabed images were estimated using an automated image processing technique and tested with observed grain size distributions derived from manual measurements on a subset of 16 images. Swath bathymetry and seafloor acoustic backscatter data were collected repeatedly at each site using a 234.5 kHz phase-differencing sidescan sonar to characterize sand wave geometry and bathymetric change resulting from sand wave migration. Current velocity data were collected from an underway survey vessel equipped with a downward looking 600 kHz ADCP along transects oriented both along- and across the main navigation channel. Combined, these data provide a comprehensive characterization of mobile subaqueous sand dunes that can be used to improve predictions of dune growth in complicated field settings and inform efficient sediment management practices in the lower Columbia River.

How was the data set created?

  1. From what previous works were the data drawn?
  2. How were the data generated, processed, and modified?
    Date: 08-Jun-2021 (process 1 of 5)
    High resolution spatial surveys were performed between June 5 and 8, 2021 to quantify surface sediment grain size distributions of mobile subaqueous dunes at four sites in the lower Columbia River, Washington and Oregon. At each site, digital images of the sediment surface were collected with an underwater camera system that was repeatedly lowered to the seabed along a series of 1 km-long transects oriented along the main navigation channel and spaced about 60 m apart. The camera consisted of a FLIR Blackfly BFS-PGE-50S5 camera and 50 mm lens in a waterproof housing that resulted in a field of view of approximately 17 mm and a resolution of 0.00657 mm per pixel when the housing window was flush with the sediment surface. An ethernet cable between the survey vessel and camera provided power to the camera and allowed for real-time viewing of the seafloor imagery on a computer during acquisition. The locations of each seafloor image collected were determined using an Applanix POSMV Wavemaster global navigation satellite system receiver operating in DGNSS mode.
    Date: 13-Dec-2022 (process 2 of 5)
    Imagery were inspected to remove images that were not suitable for analysis, including blurry images and replicate images. Clear images of the seabed were subjectively classified into three groups including those that were suitable for automated grain size analysis, those that were too coarse (too few grains in the image), and those that were too fine (individual grains not visible) for analysis. The images that were too coarse or too fine for detailed quantitative analysis were retained for the qualitative information contained.
    Date: 20-Apr-2023 (process 3 of 5)
    The sediment grain size distributions of each image that were classified as suitable for image analysis were estimated using a combination of established automated image processing techniques (Buscombe, 2013, Rubin, 2004). Initial tests of the wavelet-based technique described in Buscombe (2013) suggested that the user-specified maximum scale, or maximum grain size that is considered in the analysis, was dependent on the size of grains in the images. An automated technique to specify an appropriate maximum scale for input in the wavelet analysis was established in the following manner. First, the grain size distributions of 15 calibration images were established by manually measuring the long and short axis of 100 grains in the images following methods described in Warrick and others (2009). Second, the wavelet analysis was applied using a range of maximum scale values for each calibration image and the optimal maximum scales were defined based on the RMS error between the measured and estimated quantiles describing the grain size distributions. Third, the autocorrelation coefficients of each image were computed according to Rubin (2004). The optimal maximum scale established for each calibration image was related to the lag distance corresponding to an autocorrelation coefficient of 0.65 using an exponential fit. Finally, the maximum scales of objective images were specified for the wavelet analysis based on the exponential curve.
    Date: 22-Apr-2023 (process 4 of 5)
    The grain size distributions estimated from automated image processing techniques (Buscombe, 2013, Rubin, 2004) were tested for a set of 16 validation images (separate from the calibration images used to establish the autocorrelation-maximum scale relationship) with observed grain size distributions. The observed grain size distribution data was generated for each image by manually measuring the long and short axis of 100 grains in the images following methods described in Warrick and others (2009). Grain size statistics were calculated based on the average distribution of long and short axis grain size measurements. Root-mean-square error between estimated and measured quantiles of the cumulative size distributions (using a percent finer convention; d16, d25, d50, d75, d84, and d90) varied between 5 and 12 mm or between 6 and 23 percent when normalized by the mean measured quantile. Agreement between estimated and measured cumulative size distribution was poorest for the smallest size fractions, with estimated quantiles biased too low. Good agreement was achieved for the median estimated grain size (d50), with a total root-mean-square error of 0.04 mm (6 percent) for images with median measured diameters between 0.29 and 1.07 mm.
    Date: 03-May-2023 (process 5 of 5)
    The grain size distributions of all suitable images collected in the lower Columbia River were computed using automated image processing techniques (Buscombe, 2013, Rubin, 2004). The results of the image analysis for the calibration and validation images and each site sampled were compiled into a comma-separated text files for distribution.
  3. What similar or related data should the user be aware of?
    Buscombe, Daniel, 2013, Transferable wavelet method for grain-size distribution from images of sediment surfaces and thin sections, and other natural granular patterns.

    Online Links:

    Other_Citation_Details:
    Buscombe, D., 2013, Transferable wavelet method for grain-size distribution from images of sediment surfaces and thin sections, and other natural granular patterns, Sedimentology, v. 160, pp. 1709-1732.
    Rubin, David M., 2004, A simple autocorrelation algorithm for determining grain size from digital images of sediment.

    Online Links:

    Other_Citation_Details:
    Rubin, D.M., 2004, A simple autocorrelation algorithm for determining grain size from digital images of sediment, Journal of Sedimentary Research, v. 74, pp. 160-165.
    Warrick, Jonathan A., Rubin, David M., Ruggiero, Peter, Harney, Jodi N., Draut, Amy E., and Buscombe, Daniel, 2009, Cobble cam: grain-size measurements of sand to boulder from digital photographs and autocorrelation analyses.

    Online Links:

    Other_Citation_Details:
    Warrick, J.A., Rubin, D.M., Ruggier, P., Harney, J.N., Draut, A.E., and Buscombe, D., 2009, Cobble cam: grain-size measurements of sand to boulder from digital photographs and autocorrelation analyses, Earth Surface Processes and Landforms, v. 34, pp. 1811-1821.

How reliable are the data; what problems remain in the data set?

  1. How well have the observations been checked?
    The grain size distributions estimated from automated image processing techniques (Buscombe, 2013, Rubin, 2004) were tested for a set of 16 images with observed grain size distributions. The observed grain size distribution data was generated for each image by manually measuring the long and short axis of 100 grains in the images following methods described in Warrick and others (2009). Grain size statistics were calculated based on the average distribution of long and short axis grain size measurements. Root-mean-square error between estimated and measured quantiles of the cumulative size distributions (using a percent finer convention; d16, d25, d50, d75, d84, and d90) varied between 5 and 12 mm or between 6 and 23 percent when normalized by the mean measured quantile. Agreement between estimated and measured cumulative size distribution was poorest for the smallest size fractions, with estimated quantiles biased too low. Good agreement was achieved for the median estimated grain size (d50), with a total root-mean-square error of 0.04 mm (6 percent) for images with median measured diameters between 0.29 and 1.07 mm.
  2. How accurate are the geographic locations?
    The locations of each seafloor image collected were determined using an Applanix POSMV Wavemaster operating in DGNSS mode. Manufacturer reported accuracy of the horizontal positions while operating in DGNSS mode is between 0.5 and 2 m depending on the quality of the DGNSS corrections received (https://www.applanix.com/downloads/products/specs/posmv/POS-MV-WaveMaster-II.pdf). Additional uncertainty in the horizontal positions of the images due to instrument layback, or non-vertical wire angle between surface vessel and camera at the seafloor, is unknown but assumed to be minimal because of the weight of the camera and slow speed of the vessel relative to the ambient currents during image acquisition.
  3. How accurate are the heights or depths?
  4. Where are the gaps in the data? What is missing?
    Dataset is considered complete for the information presented, as described in the abstract. Users are advised to read the rest of the metadata record carefully for additional details.
  5. How consistent are the relationships among the observations, including topology?
    No formal logical accuracy tests were conducted.

How can someone get a copy of the data set?

Are there legal restrictions on access or use of the data?
Access_Constraints None
Use_Constraints USGS-authored or produced data and information are in the public domain from the U.S. Government and are freely redistributable with proper metadata and source attribution. Please recognize and acknowledge the U.S. Geological Survey as the originator(s) of the dataset and in products derived from these data.
  1. Who distributes the data set? (Distributor 1 of 1)
    U.S. Geological Survey - CMGDS
    2885 Mission Street
    Santa Cruz, CA

    1-831-427-4747 (voice)
    pcmsc_data@usgs.gov
  2. What's the catalog number I need to order this data set? These data are available in csv format accompanied by CSDGM FGDC-compliant metadata.
  3. What legal disclaimers am I supposed to read?
    Unless otherwise stated, all data, metadata and related materials are considered to satisfy the quality standards relative to the purpose for which the data were collected. Although these data and associated metadata have been reviewed for accuracy and completeness and approved for release by the U.S. Geological Survey (USGS), no warranty expressed or implied is made regarding the display or utility of the data on any other system or for general or scientific purposes, nor shall the act of distribution constitute any such warranty.
  4. How can I download or order the data?
    • Availability in digital form:
      Data format: csv table containing grain size distributions of images collected for calibration and validation of the image processing technique. in format comma-delimited text (version MATLAB Version: 9.13.0.2080170 (R2022b)) Size: 0.013
      Network links: https://doi.org/10.5066/P92U1KPY
      Data format: csv table containing grain size distributions of images collected from the Lower Dobelbower (ldb) site. in format comma-delimited text (version MATLAB Version: 9.13.0.2080170 (R2022b)) Size: 0.126
      Network links: https://doi.org/10.5066/P92U1KPY
      Data format: csv table containing grain size distributions of images collected from the Skamokawa (skm) site. in format comma-delimited text (version MATLAB Version: 9.13.0.2080170 (R2022b)) Size: 0.131
      Network links: https://doi.org/10.5066/P92U1KPY
      Data format: csv table containing grain size distributions of images collected from the Slaughters Bar (slg) site. in format comma-delimited text (version MATLAB Version: 9.13.0.2080170 (R2022b)) Size: 0.093
      Network links: https://doi.org/10.5066/P92U1KPY
      Data format: csv table containing grain size distributions of images collected from the Willow Bar (wlw) site. in format comma-delimited text (version MATLAB Version: 9.13.0.2080170 (R2022b)) Size: 0.157
      Network links: https://doi.org/10.5066/P92U1KPY
    • Cost to order the data: None.


Who wrote the metadata?

Dates:
Last modified: 08-Aug-2023
Metadata author:
U.S. Geological Survey, Pacific Coastal and Marine Science Center
Attn: PCMSC Science Data Coordinator
2885 Mission Street
Santa Cruz, CA

831-427-4747 (voice)
pcmsc_data@usgs.gov
Metadata standard:
Content Standard for Digital Geospatial Metadata (FGDC-STD-001-1998)

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