Structure-from-Motion (SfM) surface models derived from seafloor video from the Channel Islands, California

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Metadata:

Identification_Information:
Citation:
Citation_Information:
Originator: Evan T. Dailey
Publication_Date: 2018
Title:
Structure-from-Motion (SfM) surface models derived from seafloor video from the Channel Islands, California
Geospatial_Data_Presentation_Form: TIFF
Series_Information:
Series_Name: data release
Issue_Identification: DOI:10.5066/P929SXZE
Publication_Information:
Publication_Place:
Pacific Coastal and Marine Science Center, Santa Cruz, California
Publisher: U.S. Geological Survey
Online_Linkage: https://doi.org/10.5066/P929SXZE
Online_Linkage:
Description:
Abstract:
Structure-from-Motion (SfM) surface models were created using seafloor video collected over a visible fault scarp in the Channel Islands, California, during a 2016 U.S. Geological Survey (USGS) field activity. Four SfM surface models were created, each with a different combination of locating, scaling, and optimizing methods. Video imagery was collected using the USGS Pacific Coastal and Marine Science Center's BOBSled, equipped with high-definition (720p) video cameras (video published in Coastal and Marine Geology Program video and photo portal, Golden and others, 2015). The sled was towed behind the R/V Shearwater and shipboard GPS locations were recorded every 1 second in the video's audio channel. The models were geolocated and scaled using either shipboard GPS or georeferencing the imagery to existing sonar bathymetry at a lower resolution (Cochrane and others, 2018). The models were optimized using either a fixed lens model or automatic calibration in the SfM software, and the files presented here are named to reflect their processing method: "AutoCal" refers to automatic calibration by the SfM software; "Cal" refers to image calibration using a fixed lens model; "Georef" refers to locations derived from georeferencing the video imagery to the existing sonar data; and "ShipGPS" refers to locations derived from the shipboard GPS embedded in the video. Each file was created using one of each of the calibration and location methods, indicated in the filename as "SfM_CalibrationMethod_LocationMethod_UTM10N."
Purpose:
These surface models were produced to assess the accuracy and precision of different Structure-from-Motion workflows.
Supplemental_Information:
Additional information about the field activity from which these data were derived is available online at: http://cmgds.marine.usgs.gov/fan_info.php?fan=2016-668-FA
Any use of trade, product, or firm names is for descriptive purposes only and does not imply endorsement by the U.S. Government.
Although this Federal Geographic Data Committee-compliant metadata file is intended to document the data set in nonproprietary form, as well as in Esri format, this metadata file may include some Esri-specific terminology.
Time_Period_of_Content:
Time_Period_Information:
Range_of_Dates/Times:
Beginning_Date: 20160925
Ending_Date: 20160929
Currentness_Reference: ground condition
Status:
Progress: Complete
Maintenance_and_Update_Frequency: None planned
Spatial_Domain:
Bounding_Coordinates:
West_Bounding_Coordinate: -120.275
East_Bounding_Coordinate: -120.27
North_Bounding_Coordinate: 34.011
South_Bounding_Coordinate: 34.009
Keywords:
Theme:
Theme_Keyword_Thesaurus: USGS Metadata Identifier
Theme_Keyword: USGS:5bae6310e4b08583a5d30f7c
Theme:
Theme_Keyword_Thesaurus: ISO 19115 Topic Category
Theme_Keyword: elevation
Theme_Keyword: oceans
Theme:
Theme_Keyword_Thesaurus: Data Categories for Marine Planning
Theme_Keyword: Bathymetry and Elevation
Theme:
Theme_Keyword_Thesaurus: USGS Thesaurus
Theme_Keyword: bathymetry
Theme_Keyword: bathymetry measurement
Theme_Keyword: sea-floor characteristics
Theme_Keyword: geospatial datasets
Theme_Keyword: marine geophysics
Theme_Keyword: remote sensing
Theme_Keyword: videography
Theme_Keyword: image mosaics
Theme:
Theme_Keyword_Thesaurus: Marine Realms Information Bank (MRIB) keywords
Theme_Keyword: seabed
Theme_Keyword: data processing
Theme:
Theme_Keyword_Thesaurus: None
Theme_Keyword: U.S. Geological Survey
Theme_Keyword: USGS
Theme_Keyword: Coastal and Marine Geology Program
Theme_Keyword: CMGP
Theme_Keyword: Pacific Coastal and Marine Science Center
Theme_Keyword: PCMSC
Place:
Place_Keyword_Thesaurus: Geographic Names Information System (GNIS)
Place_Keyword: Channel Islands National Park
Place_Keyword: Channel Islands
Place_Keyword: Pacific Ocean
Access_Constraints: None
Use_Constraints:
USGS-authored or produced data and information are in the public domain from the U.S. Government and are freely redistributable with proper metadata and source attribution. Please recognize and acknowledge the U.S. Geological Survey as the originator of the dataset and in products derived from these data. This information is not intended for navigation purposes.
Point_of_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization:
U.S. Geological Survey, Pacific Coastal and Marine Science Center
Contact_Person: PCMSC Science Data Coordinator
Contact_Address:
Address_Type: mailing and physical
Address: 2885 Mission Street
City: Santa Cruz
State_or_Province: CA
Postal_Code: 95060
Contact_Voice_Telephone: 831-460-4747
Contact_Electronic_Mail_Address: pcmsc_data@usgs.gov
Browse_Graphic:
Browse_Graphic_File_Name: Browse_Graphic_File_Description:
Image map of the SfM elevation model created using automatic calibration and shipboard GPS locations
Browse_Graphic_File_Type: PNG
Data_Set_Credit: Data collection was funded by U.S. Geological Survey
Native_Data_Set_Environment:
Microsoft Windows 7 Service Pack 1 with Esri ArcGIS version 10.5.0.6491
Cross_Reference:
Citation_Information:
Originator: Guy R. Cochrane
Originator: David P. Finlayson
Originator: Evan T. Dailey
Publication_Date: 2018
Title:
Bathymetry data collected in 2007 from the San Miguel Passage in the Channel Islands, California
Series_Information:
Series_Name: data release
Issue_Identification: DOI:10.5066/F78G8HVC
Publication_Information:
Publication_Place: Pacific Coastal and Marine Science Center, Santa Cruz, CA
Publisher: U.S. Geological Survey
Online_Linkage: https://doi.org/10.5066/F78G8HVC
Cross_Reference:
Citation_Information:
Originator: Nadine E. Golden
Originator: Seth D. Ackerman
Originator: Evan T. Dailey
Publication_Date: 2015
Title: Coastal and Marine Geology Program video and photograph portal
Series_Information:
Series_Name: data release
Issue_Identification: DOI:10.5066/F7JH3J7N
Publication_Information:
Publication_Place: Pacific Coastal and Marine Science Center, Santa Cruz, CA
Publisher: U.S. Geological Survey
Online_Linkage: https://doi.org/10.5066/F7JH3J7N
Data_Quality_Information:
Attribute_Accuracy:
Attribute_Accuracy_Report:
The horizontal and vertical accuracies of the surface models were compared against existing sonar data (Cochrane and others, 2018). The scale accuracy of the surface models was compared by measuring the camera sled's scale laser as it appeared in the original still frames and the still frames after being aligned and located in the SfM software.
Logical_Consistency_Report: All data fall within expected ranges.
Completeness_Report:
Dataset is considered complete for the information presented, as described in the abstract. Users are advised to read the rest of the metadata record carefully for additional details.
Positional_Accuracy:
Horizontal_Positional_Accuracy:
Horizontal_Positional_Accuracy_Report:
Assessing the true horizontal accuracy of the models is prone to uncertainty because they were compared against lower-resolution sonar data. The sonar data had a horizontal accuracy of no less than 2 m. The horizontal accuracy of the SfM models ranged from approximately 0 to 5 m as compared to the sonar data. Overall horizontal accuracy is assumed to be no less than 2 m and no greater than 10 m. The average horizontal scaling of all the models is estimated to be accurate to within 1.25 cm, and 0.15 on average in the model created using shipboard GPS and automatic calibration.
Vertical_Positional_Accuracy:
Vertical_Positional_Accuracy_Report:
Estimated to be 0.6 meters different than the sonar data, on average. The sonar data had a vertical accuracy estimated to be no less than 5 percent water depth. The average vertical scaling of all the models is estimated to be accurate to within 1.25 cm, and 0.15 on average in the model created using shipboard GPS and automatic calibration.
Lineage:
Process_Step:
Process_Description:
Data Collection: Video was collected during USGS field activity 2016-668-FA in the Channel Islands, CA. Video footage was collected using the USGS camera sled, which was equipped with two high resolution video cameras, one pointing downward (vertical) and the other pointing slightly forward (oblique) and was towed by the research vessel Shearwater. The camera sled was also equipped with paired lasers to provide scaling to features on the seafloor. Video was recorded in depths approximately 10 to 70 meters. Shipboard GPS locations were recorded every 1 second into one of the audio channels of the video using Red Hen Systems, LLC hardware.
Process_Date: 201801
Process_Step:
Process_Description:
Structure-from-Motion Processing: Still frames were extracted from the video at a constant rate of 1 frame every 2/3 second. For the shipboard GPS method 6 markers were selected throughout the video imagery. Those markers were assigned latitude and longitude values from the shipboard GPS according to the playback time of that video frame, and the markers were assigned the depth from the existing sonar that corresponded to that location. For the georeferencing method, features visible in the video imagery were georeferenced to that feature where it was visible in the sonar data (7 markers were assigned this way). A lens model was developed using the BOBSled cameras to record imagery of a calibration board in a salt-water tank. That imagery was used to create a model, and the SfM software's lens model was exported as the fixed lens model. Automatic calibration by the SfM software was also used. Four models were produced: calibrated using a fixed lens model with the shipboard GPS that was embedded in the audio ("SfM_Cal-ShipGPS_UTM10N.tif"), lens model auto-calibrated by the SfM software with ship GPS ("SfM_AutoCal-ShipGPS_UTM10N.tif"), calibrated using a fixed lens model with locations derived from georeferencing the video imagery to the existing sonar bathymetry ("SfM_Cal-Georef_UTM10N.tif"), and auto-calibrated with georeferenced locations ("SfM_AutoCal-Georef_UTM10N.tif"). SfM models were created using Agisoft PhotoScan version 1.3.5. Photos were aligned in PhotoScan, iteratively 'cleaned' to reduce error using the following steps in PhotosScan: all points with reconstruction uncertainty greater than 10 were deleted (iteratively - no more than 50 percent of the models points were deleted at a time); all points with projection accuracy greater than 3 were deleted; reprojection error was reduced to 0.3 by iteratively deleting no more than 10 percent of the models points; after each of the previous steps, cameras were optimized; a dense point cloud was created in PhotoScan; digital elevation model created from dense point cloud in PhotoScan; elevation model exported as TIF image.
Process_Date: 20180108
Process_Step:
Process_Description:
Edited metadata to add keywords section with USGS persistent identifier as theme keyword. No data were changed.
Process_Date: 20201019
Process_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey
Contact_Person: VeeAnn A. Cross
Contact_Position: Marine Geologist
Contact_Address:
Address_Type: Mailing and Physical
Address: 384 Woods Hole Road
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Contact_Voice_Telephone: 508-548-8700 x2251
Contact_Facsimile_Telephone: 508-457-2310
Contact_Electronic_Mail_Address: vatnipp@usgs.gov
Spatial_Data_Organization_Information:
Direct_Spatial_Reference_Method: Raster
Raster_Object_Information:
Raster_Object_Type: Grid Cell
Spatial_Reference_Information:
Horizontal_Coordinate_System_Definition:
Planar:
Grid_Coordinate_System:
Grid_Coordinate_System_Name: Universal Transverse Mercator
Universal_Transverse_Mercator:
UTM_Zone_Number: 10N
Transverse_Mercator:
Scale_Factor_at_Central_Meridian: 0.9996
Longitude_of_Central_Meridian: -123.0
Latitude_of_Projection_Origin: 0.0
False_Easting: 500000.0
False_Northing: 0.0
Planar_Coordinate_Information:
Planar_Coordinate_Encoding_Method: coordinate pair
Coordinate_Representation:
Abscissa_Resolution: 0.00422002
Ordinate_Resolution: 0.00422002
Planar_Distance_Units: METERS
Geodetic_Model:
Horizontal_Datum_Name: WGS_1984_UTM_Zone_10N
Ellipsoid_Name: WGS 84
Semi-major_Axis: 6378137.0
Denominator_of_Flattening_Ratio: 298.257223563
Vertical_Coordinate_System_Definition:
Altitude_System_Definition:
Altitude_Datum_Name: MLLW
Altitude_Resolution: 1.0E-4
Altitude_Distance_Units: Meters
Altitude_Encoding_Method:
Explicit elevation coordinate included with horizontal coordinates
Entity_and_Attribute_Information:
Detailed_Description:
Entity_Type:
Entity_Type_Label: Attribute table
Entity_Type_Definition:
Table containing attribute information associated with the dataset
Entity_Type_Definition_Source: U.S. Geological Survey
Attribute:
Attribute_Label: Value
Attribute_Definition: Depth relative to mean lower low water (MLLW) in meters
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: -28.6
Range_Domain_Maximum: -36.0457
Attribute_Units_of_Measure: Meters
Distribution_Information:
Distributor:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey - ScienceBase
Contact_Address:
Address_Type: Mailing and Physical
Address: Denver Federal Center, Building 810, Mail Stop 302
City: Denver
State_or_Province: CO
Postal_Code: 80225
Contact_Voice_Telephone: 1-888-275-8747
Contact_Electronic_Mail_Address: sciencebase@usgs.gov
Resource_Description:
These data are available in TIFF format (SfM_AutoCal-Georef_UTM10N.tif, SfM_Cal-Georef_UTM10N.tif, SfM_AutoCal-ShipGPS_UTM10N.tif, SfM_Cal-ShipGPS_UTM10N.tif) contained in a single zip file which also includes CSDGM FGDC-compliant metadata, and a browse image map of the data (.jpg). The TIFF data files are named with the following convention: SfM, calibration method, location method, and projected coordinate system.
Distribution_Liability:
Unless otherwise stated, all data, metadata and related materials are considered to satisfy the quality standards relative to the purpose for which the data were collected. Although these data and associated metadata have been reviewed for accuracy and completeness and approved for release by the U.S. Geological Survey (USGS), no warranty expressed or implied is made regarding the display or utility of the data on any other system or for general or scientific purposes, nor shall the act of distribution constitute any such warranty.
Standard_Order_Process:
Digital_Form:
Digital_Transfer_Information:
Format_Name: TIFF
Format_Version_Number:
Agisoft PhotoScan Professional Version 1.3.5 build 5649 (64 bit)
Format_Information_Content:
The .zip file contains four TIFF rasters (.tif), a browse image map, and the metadata.
File_Decompression_Technique: No compression applied.
Transfer_Size: 1264.68
Digital_Transfer_Option:
Online_Option:
Computer_Contact_Information: Access_Instructions:
Data can be downloaded using the Network_Resource_Name links. The first link is a direct link to download the zipped file of data and metadata. The second link points to a landing page with metadata and data
Fees: None.
Technical_Prerequisites: These data can be viewed with Esri ArcGIS software.
Metadata_Reference_Information:
Metadata_Date: 20201019
Metadata_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization:
U.S. Geological Survey, Pacific Coastal and Marine Science Center
Contact_Person: PCMSC Science Data Coordinator
Contact_Address:
Address_Type: mailing and physical
Address: 2885 Mission Street
City: Santa Cruz
State_or_Province: CA
Postal_Code: 95060
Contact_Voice_Telephone: 831-460-4747
Contact_Electronic_Mail_Address: pcmsc_data@usgs.gov
Metadata_Standard_Name: Content Standard for Digital Geospatial Metadata
Metadata_Standard_Version: FGDC-STD-001-1998

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