Arnell S. Forde
Shawn V. Dadisman
James G. Flocks
Ryan Fosness
Chris Welcker
Kyle W. Kelso
2014
Archive of Digital Chirp Subbottom Profile Data Collected During USGS Cruise 13GFP01, Brownlee Dam and Hells Canyon Reservoir, Idaho and Oregon, 2013
Tabular, vector, and raster digital data
U.S. Geological Survey Data Series
829
St. Petersburg, FL
U.S. Geological Survey
http://pubs.usgs.gov/ds/0829/software/arc/arc.zip
http://pubs.usgs.gov/ds/0829/
From March 16 - 31, 2013, the U.S. Geological Survey conducted a geophysical survey to investigate sediment deposits and long-term sediment transport within the Snake River from Brownlee Dam to Hells Canyon Reservoir, Idaho; this effort will help the USGS to better understand geologic processes. This report serves as an archive of unprocessed digital chirp subbottom data, trackline maps, navigation files, GIS information, and formal FGDC metadata. Gained digital images of the seismic profiles are also provided. The archived trace data are in standard Society of Exploration Geophysicists (SEG) SEG Y revision 0 format (Barry and others, 1975) and may be downloaded and processed with commercial or public domain software such as Seismic Unix (SU). Example SU processing scripts and USGS software for viewing the SEG Y files (Zihlman, 1992) are also provided.
These data are also available for viewing using GeoMapApp (<http://www.geomapapp.org/>) and Virtual Ocean (<http://www.virtualocean.org/>) multi-platform open source software. In addition, the SEG Y files can also be downloaded from the USGS Coastal and Marine Geoscience Data System (<http://cmgds.marine.usgs.gov>)
To archive all digital chirp subbottom profile data and associated files collected during cruise 13GFP01.
The USGS Saint Petersburg Coastal and Marine Science Center (SPCMSC) - St. Petersburg, FL, assigns a unique identifier to each cruise or field activity. For example, 13GFP01 tells us the data were collected in 2013 during the first field activity for that project in that calendar year. Refer to <http://walrus.wr.usgs.gov/infobank/programs/html/definition/activity.html> for a detailed description of the method used to assign the cruise ID. The naming convention used for each subbottom line is as follows: yyGFP01_##a, where 'yy' are the last two digits of the year in which the data were collected, 'GFP01' represents the Geological Framework Processes project and activity number for which the data were collected, '##' is a 2-digit number representing a sprecific track, and 'a' is a letter representing the section of a line if recording was prematurely terminated or rerun for quality or acquisition problems.
All Chirp systems use a signal of continuously varying frequency; the system used during this survey produces high-resolution, shallow-penetration (typically less than 50-ms) profile images of sub-suface stratrigraphy. The towfish contains a transducer that transmits and receives acoustic energy and is typically towed 1 - 2 m below the water surface. As transmitted acoustic energy intersects density boundaries, such as the river bottom or sub-surface sediment layers, some energy is reflected back toward the transducer, received, and recorded by a PC-based seismic acquisition system. This process is repeated at regular time intervals (for example, 0.125 s) and returned energy is recorded for a specific duration (for example, 50 ms). In this way, a two-dimensional (2-D) vertical image of the shallow geologic structure beneath the towfish is produced.
The seismic source utilized during 13GFP01 consisted of an EdgeTech SB-424 towfish running Discover v. 3.51 acquisition software and towed approximately 2 - 5 m behind the GPS antenna. The data were acquired using a frequency sweep that varied between 4 - 24 kHz, a 43 kHz sample frequency, and approximately 130 ms record length. Based on survey speeds of 3.5 knots, the shot spacing was about 0.450 m.
The binary portion of the unprocessed seismic data are stored in SEG Y rev. 0 (Barry and others, 1975), IBM float format, which is a standard digital format that can be read and manipulated by most seismic processing software packages; the first 3,200 bytes of the file header are in ASCII format instead of EBCDIC format. The SEG Y formatted trace files have a .sgy extension. The SEG Y files may be downloaded and processed with commercial or public domain software such as Seismic Unix (SU) (Cohen and Stockwell, 2010). Also provided are example SU scripts that allow the user to strip off navigation fixes from the SEG Y headers, along with a fix for every 1,000 shots, and produce a printable, gained GIF image of each profile. The printable profiles provided here are GIF images that were gained using SU software. Refer to the Software page of this report for links to example SU processing scripts and USGS software for viewing the SEG Y files (Zihlman, 1992).
20130316
20130331
Data collection interval
None planned
-117.244106
-116.700558
45.242786
44.363828
USGS Metadata Identifier
USGS:2217922d-4b96-4c52-8016-b38562703090
ISO 19115 Topic Category
geoscientificinformation
oceans
None
Geology
River
Subbottom profile
Seismic reflection
Chirp
Society of Exploration Geophysicists
SEG Y
Geological Framework Processes
13GFP01
Data Categories for Marine Planning
distributions
substrate
Marine Realms Information Bank (MRIB) Keywords
seismic reflection
marine geophysics
USGS Thesaurus
seismic reflection methods
sub-bottom profiling
marine geophysics
Geographic Names Information System (GNIS) Content
United States of America
Idaho
Oregon
Snake River
Brownlee Dam
Hells Canyon Reservoir
None. These data are held in the public domain.
The U.S. Geological Survey requests to be acknowledged as originator of the data in future products or derivative research.
Arnell S. Forde
U.S. Geological Survey
Geologist
mailing and physical
600 4th Street South
Saint Petersburg
FL
33701
USA
(727) 803-8747 ext. 3111
aforde@usgs.gov
<http://pubs.usgs.gov/ds/0829/maps/13GFP01_location.jpg>
Figure 1. Location map of all digital chirp subbottom data collected during USGS Field Activity 13GFP01. This map was created at a scale of 1:604,660.
JPEG
<http://pubs.usgs.gov/ds/0829/maps/13GFP01_area1.jpg>
Figure 3. Area 1 detailed trackline map of digital chirp subbottom data collected during USGS Field Activity 13GFP01. This map was created at a scale of 1:177,130.
JPEG
<http://pubs.usgs.gov/ds/0829/maps/13GFP01_area1a.jpg>
Figure 4. Area 1a detailed trackline map of digital chirp subbottom data collected during USGS Field Activity 13GFP01. This map was created at a scale of 1:106,900.
JPEG
<http://pubs.usgs.gov/ds/0829/maps/13GFP01_area2.jpg>
Figure 5. Area 2 detailed trackline map of digital chirp subbottom data collected during USGS Field Activity 13GFP01. This map was created at a scale of 1:113,600.
JPEG
<http://pubs.usgs.gov/ds/0829/maps/13GFP01_area2a.jpg>
Figure 6. Area 2a detailed trackline map of digital chirp subbottom data collected during USGS Field Activity 13GFP01. This map was created at a scale of 1:5,850.
JPEG
<http://pubs.usgs.gov/ds/0829/maps/13GFP01_area3.jpg>
Figure 7. Area 3 detailed trackline map of digital chirp subbottom data collected during USGS Field Activity 13GFP01. This map was created at a scale of 1:20,830.
JPEG
<http://pubs.usgs.gov/ds/0829/profiles/printable/>
Directory containing printable images of all subbottom profiles.
GIF
Funding and (or) support for this study was provided by the USGS Coastal and Marine Geology Program and Idaho Water Science Center. This document was improved by the reviews of Lisa Robbins and Nancy DeWitt of the USGS - St. Petersburg, FL. Disc Image Credit: Allen, Jesse, NASA, 2002. Also available on-line at <http://eoimages.gsfc.nasa.gov/images/imagerecords/37000/37320/hellscanyon_l7_2002262_lrg.jpg>
Cohen, J.K., and Stockwell, J.W., Jr., CWP/SU
2010
Seismic Unix Release 41: A free package for seismic research and processing, Center for Wave Phenomena, Colorado School of Mines
<http://www.cwp.mines.edu/cwpcodes/index.html>
Zihlman, F.N., USGS
1992
DUMPSEGY V1.0: A program to examine the contents of SEG Y disk-image seismic data
U.S. Geological Survey Open-File Report
92-590
28 pages
<http://pubs.er.usgs.gov/usgspubs/ofr/ofr92590>
Barry, K.M., Cavers, D.A., and Kneale, C.W.
1975
Recommended standards for digital tape formats
Geophysics
v. 40, no. 2
pages 344-352
<http://www.seg.org/publications/tech-stand/>
The validity or accuracy of marine subbottom profiles is highly qualitative and depends on equipment and operating condition variables. Visual inspection of the images rendered from the data did not show any major anomalies.
This dataset is from one field activity with consistent instrument calibrations.
These data are collected along tracklines (2-D) and are therefore inherently incomplete. Geologic details between lines must be inferred. No data were collected for lines 13GFP01_10, 13GFP01_27, 13GFP01_30, 13GFP01_45, 13GFP01_50 and 13GFP01_70. Line 13GFP01_01 lost navigation data after shot 15837 and there is an unexplained jump in the DOY from 72 to 76 at shot 10494. No navigation fixes were recorded for line 13GFP01_31 doesn't have navgation data until shot 16277; Line 13GFP01_39 only has navigation until shot 5344 (please see the operation log for additional information).
As the subbottom data were acquired, the position of the vessel was continuously determined by a CodaOctopus F190 DGPS and subsequently sent to Hypack 2010 navigation software to ensure a consistent grid spacing during data collection. Positions were recorded and written to the trace headers in latitude and longitude coordinates about every 1 s using navigation from the CodaOctopus F190 receiver with OmniSTAR High Performance (HP) correction (accurate to within 20 cm). The approximately 2- to 5-m offset between the chirp shot and ship's GPS was not accounted for during acquisition nor have the ASCII navigation files and trackline maps been corrected to reflect the offset.
These data are not to be used for bathymetry. Two-way travel (TWT) times shown on the printable profile images are relative to the chirp towfish position, not to the sea surface.
Chirp processing: The acquisition system was set to only record up to 200 MB of data for each file. Any line exceeding this limitation was divided into two trace files or more (for example, 13GFP01_26 and 13GFP01_26a). The SEG Y data were processed with Seismic Unix to produce gained GIF images of the subbottom profiles included in this report. A representative chirp data processing sequence consisted of (1) stripping off navigation data for each shot and converting to SU format, (2) applying automatic gain control, (3) generating a PostScript image of the traces, and (4) converting the PostScript image to a GIF image. For additional SU processing and script details, please refer to <http://pubs.usgs.gov/ds/0829/software/su/readme.txt>.
SEG Y
2013
printable/SEG Y.gif
Arnell S. Forde
U.S. Geological Survey
Geologist
mailing and physical address
600 4th Street South
St. Petersburg
FL
33701
727-502-8000
aforde@usgs.gov
Navigation processing: Shotpoint navigation, start of line, and 1,000-shot-interval location files were extracted using Seismic Unix software and output as ASCII text files; they were then processed with PROJ.4.7.0 (<http://trac.osgeo.org/proj/>) to generate UTM coordinates (WGS84, Zone 11, meters) from latitude and longitude coordinates. Text files for each seismic line were concatenated into comma-delimited text files (for use with ESRI software); one containing unique shotpoint positions (13gfp01.txt), another containing the 1,000-shot-interval locations (s13gfp01.txt) and the last containing start of line locations (13gfp01_s), which can be viewed within the nav folder.
13GFP01_**.txt
2013
13gfp01.txt
s13gfp01.txt
13gfp01_s.txt
Arnell S. Forde
U.S. Geological Survey
Geologist
mailing and physical address
600 4th Street South
St. Petersburg
FL
33701
727-502-8000
aforde@usgs.gov
All concatenated, comma-delimited text files were imported into ArcGIS and saved as either a point or polyline file in the ESRI shapefile format. Trackline map creation: The trackline maps was created using ESRI ArcGIS 10.1 software. The processed navigation file, 13gfp01.txt, was imported into ArcMap 10 and processed using the Points to Lines ArcScript to create a line shapefile of the cruise tracklines (13gfp01_trkln). The 1,000-shot-interval file, s13gfp01.txt, and the start of line file, 13gfp01_s.txt, were imported into ArcMap as point shapefiles 13gfp01_shots and 13gfp01_sol. Please refer to the shapefile metadata included in the ArcGIS map document located under the Software section of this archive for additional details. All maps were exported to Adobe Illustrator v. 14 for further editing then later converted into JPEG format by Adobe Dreamweaver v. 10 Build 4117. The maps are unprojected (geographic coordinates, WGS84). The USGS is the originator of all layers used. Please see the ArcGIS readme file for detailed information about the GIS files used in this report.
13gfp01.txt
s13gfp01.txt
13gfp01_s.txt
2013
13gfp01_shots.shp
13gfp01_trkln.shp
13gfp01_sol.shp
Arnell S. Forde
U.S. Geological Survey
Geologist
mailing and physical address
600 4th Street South
St. Petersburg
FL
33701
727-502-8000
aforde@usgs.gov
Data Series preparation: In addition to the process steps described above, the following steps were taken to produce this Data Series report: the handwritten cruise logs were scanned and saved as a PDF file, digital logs were created by A. Forde using the cruise logs and personal accounts of the crew members and saved as PDF files, and an HTML-based format was used to present the various parts of this archive.
2013
Arnell S. Forde
U.S. Geological Survey
Geologist
mailing and physical address
600 4th Street South
St. Petersburg
FL
33701
727-502-8000
aforde@usgs.gov
Keywords section of metadata optimized for discovery in USGS Coastal and Marine Geology Data Catalog.
20170124
U.S. Geological Survey
Alan O. Allwardt
Contractor -- Information Specialist
mailing and physical address
2885 Mission Street
Santa Cruz
CA
95060
831-460-7551
831-427-4748
aallwardt@usgs.gov
Added keywords section with USGS persistent identifier as theme keyword.
20201013
U.S. Geological Survey
VeeAnn A. Cross
Marine Geologist
Mailing and Physical
384 Woods Hole Road
Woods Hole
MA
02543-1598
508-548-8700 x2251
508-457-2310
vatnipp@usgs.gov
Horizontal X and Y locations (latitude and longitude and Zone 11 UTM coordinates) for each shot are provided as ASCII text files, along with the date and time (UTC) the shot was recorded.
0.0197271584
0.0276569562
Decimal Degrees
D_WG_S84
WGS_1984
6378137.000000
298.25722210100002
13gfp01.txt, s13gfp01.txt, and 13gfp01_s.txt
Shotpoint navigation files
SEG Y headers (<http://www.seg.org/publications/tech-stand>).
FID*
Internal feature number.
ESRI
Sequential unique whole numbers that are automatically generated.
Shape*
Feature geometry.
ESRI
Coordinates defining the features.
UTMX
UTM-X coordinate (Zone 11)
Universal Transverse Mercator Geographic Coordinate System
495994
496507
meters
UTMY
UTM-Y coordinate (Zone 11)
Universal Transverse Mercator Geographic Coordinate System
4954322
4954709
meters
Line
Trackline number
U.S. Geological Survey
The naming convention used for each subbottom line is as follows: yyGFP01_##a, where 'yy' are the last two digits of the year in which the data were collected, 'GFP01' represents the Geological Framework Processes project and activity number for which the data were collected, '##' is a 2-digit number representing a sprecific track, and 'a' is a letter representing the section of a line if recording was prematurely terminated or rerun for quality or acquisition problems.
Shot
Shotpoint number
U.S. Geological Survey
1
11354
Lon
Longitude (decimal degrees)
World Geodetic System 1984 Geographic Coordinate System
-117.050725
-117.044122
decimal degrees
Lat
Latitude (decimal degrees)
World Geodetic System 1984 Geographic Coordinate System
44.742278
44.745758
decimal degrees
YEAR
Year
U.S. Geological Survey
2013
2013
DOY:HR:MIN:SEC
Day of year:hour:minute:second
U.S. Geological Survey
Day of year, hour, minute and second of data acquisition
Binary data file: Trace data are available as binary files in SEG Y format. These files have a .sgy extension and range in size from 8.8 to 922 MB. These data can be found by going to <http://cmgds.marine.usgs.gov>.
Graphic image file: Printable versions of the subbottom profiles are available as GIF images, links to these images can be found on the Profiles page of this report or by going to <http://pubs.usgs.gov/ds/0829/profiles/printable/>.
Navigation file: Navigation files are available as ASCII text files. Provided are raw (unprocessed) shotpoint navigation files (13gfp01_**.txt), processed shotpoint navigation (13gfp01.txt), processed 1,000-shot-interval location (s13gfp01.txt), and a start of line file (13gfp01_s.txt). Fields/Attributes [FID, Shape] marked above with an asterisk (*) were created by ESRI ArcGIS and are used exclusively by the shapefiles created from the three aforementioned .txt files; these fields are not included in the original navigation files. All remaining attributes listed above in the Entity_and_Attribute_Information: section that do not have an accompanying asterisk are found in 13gfp01.txt, s13gfp01.txt, and13gfp01_s.txt. Raw and processed navigation data files can be found by going to <http://pubs.usgs.gov/ds/0829/nav/>.
GIS file: The GIS project used to create the trackline maps is provided as a .zip file composed of ESRI map documents, shapefiles, and metadata.
Information is derived from SEG Y headers.
Arnell Forde
U.S. Geological Survey
Geologist
mailing and physical
600 4th Street South
St. Petersburg
FL
33701
USA
727-502-8000
aforde@usgs.gov
All of this report is available online. The SEG Y files are downloadable from the Coastal and Marine Geoscience Data System (<http://cmgds.marine.usgs.gov>).
U.S. Geological Survey Data Series 829
This DVD publication was prepared by an agency of the United States Government. Although these data have been processed successfully on a computer system at the U.S. Geological Survey, no warranty expressed or implied is made regarding the display or utility of the data on any other system, nor shall the act of distribution imply any such warranty. The U.S. Geological Survey shall not be held liable for improper or incorrect use of the data described and (or) contained herein. Reference herein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise does not constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency thereof.
SEG Y rev. 0
The SEG Y rev. 0 format (Barry and others, 1975) presented here consists of the following: a 3,600-byte reel identification header, with the first 3,200 bytes consisting of an ASCII header block followed by a 400-byte binary header block, both of which include information specific to line and reel number; a trace data block that follows the reel identification header, with the first 240 bytes of each trace block consisting of the binary trace identification header; and seismic data samples that follow the trace identification header.
None
2425
DVD
ISO 9660
Unix, Linux, DOS, Macintosh
map document, shapefile, metadata
The GIS project used to create the trackline maps is composed of map documents, shapefiles, and metadata. Map documents were created with ESRI ArcGIS 10.1 software. The shapefiles provided may also be viewed using other versions of ESRI desktop software including their free software or ArcGIS Explorer (<http://www.esri.com/software/arcgis/explorer/index.html>).
unzip
61
http://pubs.usgs.gov/ds/0829/software/arc/arc.zip
None, if obtained online; otherwise, prices vary.
Publications are available from USGS Information Services, Box 25286, Federal Center, Denver, CO 80225-0046 (telephone: 1-888-ASK-USGS, e-mail: infoservices@usgs.gov).
Use of SEG Y data requires specialized seismic processing software, such as public domain software Seismic Unix (<http://www.cwp.mines.edu/cwpcodes/index.html>).
20201013
Arnell Forde
U.S. Geological Survey
Geologist
mailing and physical
600 4th Street South
St. Petersburg
FL
33701
USA
727-502-8000
aforde@usgs.gov
Content Standard for Digital Geospatial Metadata
FGDC-STD-001-1998