Gulf of America non-spinose planktic foraminifera culture study from 2020-2022: foraminifera measurements

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Metadata:

Identification_Information:
Citation:
Citation_Information:
Originator: Caitlin E. Reynolds
Publication_Date: 20250423
Title:
Gulf of America non-spinose planktic foraminifera culture study from 2020-2022: foraminifera measurements
Geospatial_Data_Presentation_Form: tabular digital data
Larger_Work_Citation:
Citation_Information:
Originator: Caitlin E. Reynolds
Originator: Jennifer S. Fehrenbacher
Originator: Kaustubh Thirumalai
Originator: Eric J. Tappa
Originator: Julie N. Richey
Publication_Date: 20250423
Title:
Gulf of America Non-Spinose Planktic Foraminifera Culture Study From 2020-2022
Geospatial_Data_Presentation_Form: tabular digital data
Series_Information:
Series_Name: U.S. Geological Survey data release
Issue_Identification: doi:10.5066/P147MDIE
Publication_Information:
Publication_Place: St. Petersburg, Florida
Publisher:
U.S. Geological Survey – St. Petersburg Coastal and Marine Science Center
Online_Linkage: https://doi.org/10.5066/P147MDIE
Description:
Abstract:
The methodologies and resources which were used to cultivate Globorotalia truncatulinoides and other non-spinose planktic foraminiferal species, such as Globorotalia menardii, are described in this release and in more detail in Reynolds and others (2025). Several specimens (n=69) were collected via plankton tows from the upper 200 meters (m) of the water column from the northern Gulf of America in February 2020, December 2021, and November 2022. Size measurements and growth, notes and observations, and laser ablation inductively coupled plasma mass spectrometry (LA-ICPMS) data were recorded on a few selected foraminifera individuals. The foraminifera specimen survived between 8 and 76 days in a laboratory study (initially cut short by the abrupt closure of laboratory facilities due to the spread of the Coronavirus in 2019 (COVID-19 pandemic).
Purpose:
The growth and observation of foraminifera in laboratory culture has been an incredibly valuable tool in studying the biomineralization and partitioning of chemical constituents during foraminiferal calcification. These studies allow for the isolation of physical and chemical conditions that control the elemental and stable isotopic composition of foraminifera and are crucial to calibration and interpretation of paleoenvironmental proxies in foraminifera. Relatively few laboratory culture studies have been carried out in non-spinose species of planktic foraminifera.
This study was intended to be a pilot study to test whether G. truncatulinoides specimens could be successfully harvested from plankton tow samples and kept alive in a laboratory at the U.S Geological Survey St. Petersburg Coastal and Marine Science Center (USGS SPCMSC). In addition to keeping the specimen alive in a lab, further testing included attempting to induce encrustation or gametogenesis under laboratory conditions.
Supplemental_Information:
Following SPCMSC data management protocols, the field collection activities were assigned USGS field activity numbers (FANs), 2020-302-FA, 2021-334-FA, and 2022-335-FA. Additional field and data details are available for each activity by replacing the FAN (example: 2020-302-FA) in the following url: https://cmgds.marine.usgs.gov/services/activity.php?fan=2020-302-FA.
Time_Period_of_Content:
Time_Period_Information:
Range_of_Dates/Times:
Beginning_Date: 20200208
Ending_Date: 20221216
Currentness_Reference: ground condition
Status:
Progress: Complete
Maintenance_and_Update_Frequency: None planned
Spatial_Domain:
Description_of_Geographic_Extent: Gulf of America
Bounding_Coordinates:
West_Bounding_Coordinate: -90.340433
East_Bounding_Coordinate: -89.099333
North_Bounding_Coordinate: 28.231933
South_Bounding_Coordinate: 27.533833
Keywords:
Theme:
Theme_Keyword_Thesaurus: USGS Metadata Identifier
Theme_Keyword: USGS:53f6d9d9-e8ef-4750-a71e-6d03ab0f1f7c
Theme:
Theme_Keyword_Thesaurus: ISO 19115 Topic Category
Theme_Keyword: biota
Theme:
Theme_Keyword_Thesaurus: USGS Thesaurus
Theme_Keyword: protists
Theme_Keyword: laboratory methods
Theme_Keyword: organism growth and development
Place:
Place_Keyword_Thesaurus: Common geographic areas
Place_Keyword: Gulf of America
Place_Keyword: Louisiana
Access_Constraints:
No access constraints. Please see 'Distribution Information' for details.
Use_Constraints:
These data are marked with a Creative Common CC0 1.0 Universal License. These data are in the public domain and do not have any use constraints. Users are advised to read the dataset's metadata thoroughly to understand appropriate use and data limitations.
Point_of_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person: Caitlin E. Reynolds
Contact_Organization: US Geological Survey
Contact_Position: Geologist
Contact_Address:
Address_Type: mailing and physical
Address: 600 4th Street South
City: Saint Petersburg
State_or_Province: Florida
Postal_Code: 33701
Country: USA
Contact_Voice_Telephone: 727-502-8046
Contact_Electronic_Mail_Address: creynolds@usgs.gov
Native_Data_Set_Environment:
Environment as of Metadata Creation: MacBook Pro Ventura 13.6.4; Discovery.V12 microscope-mounted camera (ZEN 2 Core v.2.4 software); Microsoft Excel for Mac Version 16.82.
Cross_Reference:
Citation_Information:
Originator: Caitlin E. Reynolds
Originator: Jennifer S. Fehrenbacher
Originator: Kaustubh Thirumalai
Originator: Eric J. Tappa
Originator: Julie N. Richey
Publication_Date: 20250422
Title:
Insights from growing Globorotalia truncatulinoides and Globorotalia menardii in the laboratory
Geospatial_Data_Presentation_Form: publication
Series_Information:
Series_Name: Journal of Foraminiferal Research
Issue_Identification: Volume 55, Issue 2
Publication_Information:
Publication_Place: McLean, VA
Publisher: GeoScienceWorld
Other_Citation_Details: Pages 131-143
Online_Linkage: https://doi.org/10.61551/gsjfr.55.2.131
Cross_Reference:
Citation_Information:
Originator: Jennifer S. Fehrenbacher
Originator: Ann D. Russell
Originator: Catherine V. Davis
Originator: Howard J. Spero
Originator: Edward Chu
Originator: Bärbel Hönisch
Publication_Date: 20180901
Title:
Ba/Ca ratios in the non-spinose planktic foraminifer Neogloboquadrina dutertrei: Evidence for an organic aggregate microhabitat
Geospatial_Data_Presentation_Form: publication
Series_Information:
Series_Name: Geochimica et Cosmochimica Acta
Issue_Identification: Volume 236
Publication_Information:
Publication_Place: Online
Publisher: Elsevier BV
Other_Citation_Details: Pages 361-372
Online_Linkage: https://doi.org/10.1016/j.gca.2018.03.008
Cross_Reference:
Citation_Information:
Originator: Alcide d'Orbigny
Publication_Date: 1839
Title: Foraminifères des îles Canaries
Geospatial_Data_Presentation_Form: publication
Series_Information:
Series_Name: Histoire naturelle des Iles Canaries
Issue_Identification: Volume 2(2)
Other_Citation_Details: Pages 120-146
Online_Linkage: https://archive.org/stream/HistoirenaturelIIWebb#page/n375/
Cross_Reference:
Citation_Information:
Originator: W.K. Parker
Originator: T.R. Jones
Originator: H.B. Brady
Publication_Date: 1865
Title:
On the nomenclature of the Foraminifera, Part XII. The species enumerated by d’Orbigny in the “Annales des Sciences Naturelles”
Geospatial_Data_Presentation_Form: publication
Series_Information:
Series_Name: Ann. Mag. Nat. Hist.
Issue_Identification: Volume 7
Publication_Information:
Publication_Place: London, England
Publisher: Taylor and Francis, Ltd
Other_Citation_Details: Pages 15-41
Data_Quality_Information:
Attribute_Accuracy:
Attribute_Accuracy_Report:
Measurements of the foraminifera specimen were calibrated with a 100 micron slide on Zeiss SteREO Discovery.V12 microscope-mounted camera with ZEN 2 Core v.2.4 software and used to ensure quality and accuracy of the data.
Logical_Consistency_Report:
All values fall within expected ranges for each species based on QA/QC. The foraminifera measurements were calibrated before being taken.
Completeness_Report:
Dataset is considered complete for the information presented, as described in the abstract. Users are advised to read the rest of the metadata record carefully for additional details.
Lineage:
Process_Step:
Process_Description:
Thirty-nine live individuals of Globorotalia truncatulinoides specimens were collected from a vertical plankton tow in the surface mixed layer (0–80 meters) of the northern Gulf of America on February 8, 2020. The plankton tow was taken at the site of our long-term sediment trap time series (27.533833 degrees North [°N], 90.340433 degrees West [°W]) during peak annual flux of G. truncatulinoides. The upper 80 m of the water column were fully mixed with an average temperature of 21.1 degrees Celsius (ºC) and salinity of 36.3. The G. truncatulinoides specimens were immediately collected and identified under a dissecting microscope, picked out using small brushes, and rinsed with filtered seawater (0.45-micrometer [µm] nitrocellulose membrane filters). The foraminifera were individually added to 70 milliliter (ml) polystyrene Falcon® culture flasks containing ambient filtered seawater. The flasks were stored in the dark at ambient temperature (20 ºC). Upon returning to the laboratory at the USGS SPCMSC in St. Petersburg, Florida, the samples were stored in a VWR International Incubator (Model 1575R) set to 20ºC.
Process_Date: 20200208
Process_Step:
Process_Description:
Seventeen Globorotalia menardii, one Neogloboquadrina dutertrei, one Globorotalia crassaformis, and one Pulleniatina obliquiloculata live specimens were collected December 6, 2021, from a vertical plankton tow in the upper 200 m of the water column at 28.231933°N, 89.099333°W. Averages for temperature and salinity throughout the tow collection were 22.5°C and 36.5 respectively. Ten additional G. menardii live specimen were collected the following year on November 30, 2022 (28.213617°N, 89.131600°W) in the same manner. The upper 200 m had an average temperature of 20.4°C and salinity of 36.4. Species were selected based on their availability in the tow material. Individual foraminifera from both collections were identified under a dissecting microscope (d'Orbigny, 1839; Parker and others, 1865) rinsed with filtered seawater (0.45-µm nitrocellulose membrane filters), and stored in Strontium-87 (87Sr)-labeled seawater (strontium carbonate [SrCO3], Series LH, Batch 136990, 91.26%) inside 70 ml polystyrene Falcon® culture flasks. The 87Sr label has an 87Sr/88Sr ratio four times greater than the natural isotopic abundance ratios and was chosen to geochemically observe growth in culture (Fehrenbacher and others, 2018). The flasks were stored in the dark at ambient temperature (20 ºC). Once back in the laboratory, the samples were stored in a VWR International Incubator (Model 1575R) set to 20 ºC.
Process_Date: 20211206
Process_Step:
Process_Description:
Whole shell length measurements of the longest axis of the individual specimens were recorded to monitor growth and/or chamber addition. For thirteen G. truncatulinoides specimens, individual chamber lengths were also measured within each whole shell measurement. Final measurements of length were made post-mortem for all species. A Zeiss SteREO Discovery.V12 microscope-mounted camera with ZEN 2 Core v.2.4 software was utilized for length measurements and photography (images available upon request).
Process_Date: 2022
Process_Step:
Process_Description:
Measurements taken in the lab for the G. menardii (whole shell; 2021 and 2022) and G. truncatulinoides (whole shell and chamber; 2020) studies were digitally compiled into Microsoft Excel (.xlsx) and comma-separated values (.csv) files and are included in this release (Foraminifera_Measurements.zip).
Process_Date: 2024
Source_Produced_Citation_Abbreviation: G. menardii_2021_whole_shell_measurements
Source_Produced_Citation_Abbreviation: G. menardii_2022_whole_shell_measurements
Source_Produced_Citation_Abbreviation: G. truncatulinoides_2020_chamber_measurements
Source_Produced_Citation_Abbreviation: G. truncatulinoides_2020_whole_shell_measurements
Entity_and_Attribute_Information:
Overview_Description:
Entity_and_Attribute_Overview:
This metadata has an associated data dictionary (Data_Dictionary_foraminifera_measurements.docx), which describes the attributes (data columns) for all foraminifera measurement (G. menardii 2021 and 2022 and G. truncatulinoides 2020 chamber and whole shell) files. The metadata for the foraminifera data are not complete if they are not distributed with this document.
Entity_and_Attribute_Detail_Citation:
The entity and attribute information were generated by the individual and/or agency identified as the originator of the dataset. Please review the rest of the metadata record for additional details and information.
Distribution_Information:
Distributor:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization:
U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center
Contact_Person: USGS SPCMSC Data Management
Contact_Address:
Address_Type: mailing and physical
Address: 600 4th Street South
City: Saint Petersburg
State_or_Province: FL
Postal_Code: 33701
Country: United States
Contact_Voice_Telephone: 727-502-8000
Contact_Electronic_Mail_Address: gs-g-spcmsc_data_inquiries@usgs.gov
Resource_Description:
G. menardii_2021_whole_shell_measurements.csv, G. menardii_2021_whole_shell_measurements.xlsx, G. menardii_2022_whole_shell_measurements.csv, G. menardii_2022_whole_shell_measurements.xlsx, G. truncatulinoides_2020_chamber_measurements.csv, G. truncatulinoides_2020_chamber_measurements.xlsx, G. truncatulinoides_2020_whole_shell_measurements.csv, G. truncatulinoides_2020_whole_shell_measurements.xlsx
Distribution_Liability:
Unless otherwise stated, all data, metadata and related materials are considered to satisfy the quality standards relative to the purpose for which the data were collected. Although these data and associated metadata have been reviewed for accuracy and completeness and approved for release by the U.S. Geological Survey (USGS), no warranty expressed or implied is made regarding the display or utility of the data for other purposes, nor on all computer systems, nor shall the act of distribution constitute any such warranty. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government.
Standard_Order_Process:
Digital_Form:
Digital_Transfer_Information:
Format_Name:
Microsoft Excel format, comma-delimited text, Microsoft Word format
Digital_Transfer_Option:
Online_Option:
Computer_Contact_Information:
Fees: None
Metadata_Reference_Information:
Metadata_Date: 20250422
Metadata_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization:
U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center
Contact_Person: USGS SPCMSC Data Management
Contact_Address:
Address_Type: mailing and physical
Address: 600 4th Street South
City: Saint Petersburg
State_or_Province: FL
Postal_Code: 33701
Country: United States
Contact_Voice_Telephone: 727-502-8000
Contact_Electronic_Mail_Address: gs-g-spcmsc_data_inquiries@usgs.gov
Metadata_Standard_Name:
FGDC Biological Data Profile of the Content Standard for Digital Geospatial Metadata
Metadata_Standard_Version: FGDC-STD-001.1-1999

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