Video transects of the sea floor collected by the U.S. Geological Survey on Stellwagen Bank during three surveys aboard the R/V Auk, September 2020 to August 2021

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Metadata:

Identification_Information:
Citation:
Citation_Information:
Originator: Page C. Valentine
Publication_Date: 20230321
Title:
Video transects of the sea floor collected by the U.S. Geological Survey on Stellwagen Bank during three surveys aboard the R/V Auk, September 2020 to August 2021
Edition: 1.0
Geospatial_Data_Presentation_Form: vector digital dataset (polyline)
Series_Information:
Series_Name: data release
Issue_Identification: DOI:10.5066/P9G7QARQ
Publication_Information:
Publication_Place: Woods Hole Coastal and Marine Science Center, Woods Hole, MA
Publisher:
U.S. Geological Survey, Coastal and Marine Hazards and Resources Program
Online_Linkage: https://doi.org/10.5066/P9G7QARQ
Online_Linkage: https://sciencebase.gov/catalog/item/633c9861d34e900e86cf1ab4
Larger_Work_Citation:
Citation_Information:
Originator: Page C. Valentine
Originator: VeeAnn A. Cross
Publication_Date: 2023
Title:
Sea-floor Sediment Samples, Seabed and Sample Imagery, and CTD Instrument Data Collected on Stellwagen Bank from September 2020 to August 2021
Edition: 1.0
Series_Information:
Series_Name: data release
Issue_Identification: DOI:10.5066/P9G7QARQ
Publication_Information:
Publication_Place: Reston, VA
Publisher: U.S. Geological Survey
Other_Citation_Details:
Suggested citation: Valentine, P.C., and Cross, V.A., 2023, Sea-floor sediment samples, seabed and sample imagery, and CTD instrument data collected on Stellwagen Bank from September 2020 to August 2021: U.S. Geological Survey data release, https://doi.org/10.5066/P9G7QARQ .
Online_Linkage: https://doi.org/10.5066/P9G7QARQ
Online_Linkage: https://sciencebase.gov/catalog/item/633c8e2dd34e900e86cf1a93
Description:
Abstract:
These data are a part of the effort to map geologic substrates of the Stellwagen Bank National Marine Sanctuary region off Boston, Massachusetts. The overall goal is to develop high-resolution (1:25,000) interpretive maps, based on multibeam sonar data and seabed sampling, showing surficial geology and seabed sediment dynamics. The work was conducted in collaboration with the Stellwagen Bank National Marine Sanctuary, and the data collected will aid research on the ecology of fish and invertebrate species that inhabit the region. The Sanctuary's research vessel, R/V Auk, visited a total of 169 locations on Stellwagen Bank during three separate surveys from September 2020 to August 2021. During these surveys a customized Van Veen grab sampler (SEABOSS) equipped with a video camera and a CTD was deployed in drift mode to collect sediment for grain-size analysis, video imagery of the seabed, and measurements of water column properties including temperature, salinity, density, and fluorescence.
Purpose:
These video tracklines indicate where imagery data of the sea floor were collected. This information will be used in making a seabed geologic map.
Supplemental_Information:
Additional information regarding the field activities associated with these data can be obtained from the following locations https://cmgds.marine.usgs.gov/fan_info.php?fan=2020-012-FA, https://cmgds.marine.usgs.gov/fan_info.php?fan=2021-016-FA, and https://cmgds.marine.usgs.gov/fan_info.php?fan=2021-017-FA .
Time_Period_of_Content:
Time_Period_Information:
Range_of_Dates/Times:
Beginning_Date: 20200924
Ending_Date: 20210804
Currentness_Reference:
Ground condition of when data were collected. These data were collected during three separate surveys, with the following ranges of dates for each survey: field activity 2020-012-FA: 20200924 to 20200925; field activity 2021-016-FA: 20210721 to 20210723; and field activity 2021-017-FA: 20210802 to 20210804.
Status:
Progress: complete
Maintenance_and_Update_Frequency: None planned
Spatial_Domain:
Bounding_Coordinates:
West_Bounding_Coordinate: -70.56283
East_Bounding_Coordinate: -70.11801
North_Bounding_Coordinate: 42.44029
South_Bounding_Coordinate: 42.09603
Keywords:
Theme:
Theme_Keyword_Thesaurus: None
Theme_Keyword: U.S. Geological Survey
Theme_Keyword: USGS
Theme_Keyword: Coastal and Marine Hazards and Resources Program
Theme_Keyword: CMHRP
Theme_Keyword: Woods Hole Coastal and Marine Science Center
Theme_Keyword: WHCMSC
Theme_Keyword: National Oceanic and Atmospheric Administration
Theme_Keyword: NOAA
Theme_Keyword: SEABed Observation and Sampling System
Theme_Keyword: SEABOSS
Theme_Keyword: stations
Theme_Keyword: navigation
Theme_Keyword: video
Theme_Keyword: trackline
Theme_Keyword: polyline shapefile
Theme:
Theme_Keyword_Thesaurus: ISO 19115 Topic Category
Theme_Keyword: oceans
Theme_Keyword: location
Theme:
Theme_Keyword_Thesaurus: USGS Thesaurus
Theme_Keyword: videos
Theme_Keyword: navigational data
Theme_Keyword: marine geology
Theme_Keyword: videography
Theme:
Theme_Keyword_Thesaurus: Marine Realms Information Bank (MRIB) keywords
Theme_Keyword: video observation
Theme:
Theme_Keyword_Thesaurus: USGS Metadata Identifier
Theme_Keyword: USGS:633c9861d34e900e86cf1ab4
Place:
Place_Keyword_Thesaurus: None
Place_Keyword: North America
Place_Keyword: United States
Place_Keyword: Massachusetts
Place_Keyword: Atlantic Ocean
Place_Keyword: Stellwagen Bank
Place_Keyword: Stellwagen Bank National Marine Sanctuary
Place_Keyword: SBNMS
Place_Keyword: Massachusetts Bay
Access_Constraints: None.
Use_Constraints: None.
Point_of_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey
Contact_Person: Page C. Valentine
Contact_Position: Research Geologist
Contact_Address:
Address_Type: mailing and physical address
Address: 384 Woods Hole Rd.
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Country: USA
Contact_Voice_Telephone: (508) 548-8700 x2239
Contact_Facsimile_Telephone: (508) 457-2310
Contact_Electronic_Mail_Address: whsc_data_contact@usgs.gov
Contact_Instructions:
The contact email address is a generic address in the event the person is no longer with the USGS.
Browse_Graphic:
Browse_Graphic_File_Name: Browse_Graphic_File_Description: Browse graphic showing the video drift lines.
Browse_Graphic_File_Type: JPEG
Cross_Reference:
Citation_Information:
Originator: D.S. Blackwood
Originator: K.F. Parolski
Publication_Date: 2001
Title: Seabed observation and sampling system
Series_Information:
Series_Name: Sea Technology
Issue_Identification: v. 42, no. 2, p. 39-43
Cross_Reference:
Citation_Information:
Originator: P. Valentine
Originator: D. Blackwood
Originator: K. Parolski
Publication_Date: 2000
Title: Seabed observation and sampling system
Series_Information:
Series_Name: U.S. Geological Survey Fact Sheet
Issue_Identification: FS-142-00
Publication_Information:
Publication_Place: Reston, VA
Publisher: U.S. Geological Survey
Online_Linkage: https://doi.org/10.3133/fs14200
Online_Linkage: https://pubs.usgs.gov/fs/fs142-00/
Cross_Reference:
Citation_Information:
Originator: P.C. Valentine
Originator: V.A. Cross
Publication_Date: 2019
Title:
Location and analyses of sediment samples collected on Stellwagen Bank off Boston, Massachusetts from November 5, 2013 to April 30, 2019 on U.S. Geological Survey field activities
Series_Information:
Series_Name: data release
Issue_Identification: DOI:10.5066/P9FWFLPD
Publication_Information:
Publication_Place: Reston, VA
Publisher: U.S. Geological Survey
Other_Citation_Details:
This publication includes the grain-size analyses of the sediment samples collected on 20 other field activities.
Online_Linkage: https://doi.org/10.5066/P9FWFLPD
Online_Linkage:
Data_Quality_Information:
Logical_Consistency_Report:
Each record within the shapefile has the same information and was derived in the same manner.
The end of the video transect sometimes coincides with the sample acquisition, but not always.
All the field activities took place on the Stellwagen Bank National Marine Sanctuary's research vessel, R/V Auk. Although these data represent three separate field activities, the set-up and acquisition on all the cruises is consistent with the exception of the navigation - which was sometimes acquired at 2-second intervals and sometimes at 5-second intervals. A video transect represents where the SEABOSS drifted and collected video of the seabed, not where the entire video was recorded at a station, which also includes the launch of the SEABOSS and descent through the water column.
Completeness_Report:
This represents the video trackline information for every video drift line obtained during the three field activities. of the 169 stations occupied by the SEABOSS during the three surveys, video imagery was collected at 168 sites. There is no video for station 4973 (survey 2021-012-FA).
Positional_Accuracy:
Horizontal_Positional_Accuracy:
Horizontal_Positional_Accuracy_Report:
The location information for the video transects was acquired from a satellite navigation receiver (Furuno Satellite Compass SC-30, GPS receiver) in geographic coordinates (World Geodetic System of 1984 [WGS 84]) with a horizontal accuracy of 10 m. Field activity 2020-012-FA acquired navigation at two-second intervals on September 24 and five-second intervals on September 25. Field activity 2021-016-FA acquired navigation at a two-second interval. Field activity 2021-017-FA acquired navigation at a two-second interval. The navigation antenna was located 5.3 m forward of the SEABed Observation and Sampling System (SEABOSS) deployment location. This offset was not accounted for in the navigation acquisition, so navigation fixes represent antenna location. The SEABOSS may also drift away from the survey vessel when deployed to the sea floor.
Lineage:
Process_Step:
Process_Description:
Seabed video imagery was collected using two battery-operated, high-definition (1920 x 1080 pixels) GoPro digital video cameras and a SeaViewer high-definition (1920 x 720 pixels) video camera mounted on the SEABOSS. See the cross-references for a description of the SEABOSS (Blackwood and Parolski, 2001; Valentine and others, 2000). The SeaViewer camera had a live feed to the surface. It was mounted a little higher on the frame than the GoPros and was used to observe obstacles, like gill nets and lobster gear, in order to avoid entanglement. One of the GoPro cameras was selected as the primary source of video. In case of camera failure, the additional GoPro and SeaViewer cameras provided backup video.
As the SEABOSS drifted over the seabed, the cameras imaged the seabed at a rate of 60 frames per second from an altitude of ~1 meter. Lighting was provided by two battery-operated Keldan LED dive lights. Each light provided a light flux of up to 9000 lumens at a correlated color temperature of 5000 kelvins. Two parallel red lasers mounted 20 centimeters apart provided a scale in the video images.
GoPro video imagery includes the launch of the SEABOSS, transit through the water column, and the drift over the seabed. The duration of 168 individual video files ranges 2 to 13.5 minutes. Video files are archived in .MP4 format and range in size from 0.2 to 3.0 gigabytes.
These video files are not available as part of this data release. Video files are archived at the USGS Woods Hole Coastal and Marine Science Center, 384 Woods Hole Road, Woods Hole, MA 02543.
The position (latitude and longitude) and time of the start of the video drift was recorded from the navigation receiver by hand in the cruise log book (see the dataset cruise_logs_2020-2021 from the larger work citation of this data release). In some cases the time of the deployment of the SEABOSS is recorded, but in all cases, the time when the system reached the seabed, and when it left the seabed are recorded - which corresponds to the video drift transects. A video transect represents where the SEABOSS drifted and collected video of the seabed, not where the entire video was recorded at a station, which also includes the launch of the SEABOSS and descent through the water column. Latitude and longitude positions recorded by hand in the log book were later adjusted to match the data recorded in the GPS navigation file based on time.
Data were collected from 2020 to 2021 with the process date representing the most recent acquisition year.
Process_Date: 2021
Process_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey
Contact_Person: Page C. Valentine
Contact_Position: Research Geologist
Contact_Address:
Address_Type: mailing and physical address
Address: 384 Woods Hole Rd.
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Country: USA
Contact_Voice_Telephone: (508) 548-8700 x2239
Contact_Facsimile_Telephone: (508) 457-2310
Contact_Electronic_Mail_Address: pvalentine@usgs.gov
Process_Step:
Process_Description:
The original raw GGA navigation was run through an AWK script (awkauk_rndissue, on a machine running Cygwin - www.cygwin.com) to reformat the latitudes and longitudes into decimal degrees and output the data into a comma-delimited text file with the following columns of information: latitude (decimal degrees out to five decimal places), longitude (decimal degrees out to five decimal places), hour, minute, second, Julian day, year. The Julian day was determined by the original date in the filename of the navigation file as the GGA string does not contain any date information. The script made sure to round the latitude and longitude values to five decimal places in the same way that Excel would round the values. The AWK script also made sure that there were no duplicate records in terms of time, such as two navigation points recorded at 16:38:23. Depending on the boat drift rate, navigation fixes carried out to only five decimal places could have duplicate fixes. The individual navigation files were concatenated into a single file for each field activity in order of acquisition. This process was repeated for all three field activities. This process step and the remaining process steps were performed by the same person - VeeAnn A. Cross.
Process_Date: 2022
Process_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey
Contact_Person: VeeAnn A. Cross
Contact_Position: Marine Geologist
Contact_Address:
Address_Type: Mailing and Physical
Address: 384 Woods Hole Road
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Contact_Voice_Telephone: 508-548-8700 x2251
Contact_Facsimile_Telephone: 508-457-2310
Contact_Electronic_Mail_Address: vatnipp@usgs.gov
Process_Step:
Process_Description:
Another AWK script (awkdrift_pullstartend) was run on the station summary CSV file to extract the following columns of information: station, Julian day of video start, UTC time of video start, Julian day of video end, UTC time of video end, and year. This same process was repeated for all three field activities.
Process_Date: 2022
Process_Step:
Process_Description:
A Python script (driftlog_gui_v6.py) run from Python IDLE version 2.7.18 on Windows 10 was used to extract all the navigation points from the navigation file based on the start and end time of the video drift and combine these into polylines. Ideally, there is a match of the same time (with a corresponding navigation fix) in the GPS file to the start and end video times recorded in the log book. However, if this situation does not exist, then the closest (in time) navigation record to the start and end time of the video transect is used, along with all the navigation points in between those two times. Since location in the log book were updated based on the navigation files, these values should match. These extracted points were then combined into a polyline shapefile. The resulting shapefile has a polyline for every video drift on a single cruise. Based on the navigation system, the coordinate system of the dataset was set to geographic coordinates, WGS 84.
Process_Date: 2022
Process_Step:
Process_Description:
The three individual polyline shapefiles were then combined in QGIS 3.16.7 using the Merge Vector Layers tool. The output dataset was set to a shapefile. Two fields created by QGIS as a result of the merge (layer and path) were removed as unnecessary information.
Process_Date: 2022
Spatial_Data_Organization_Information:
Direct_Spatial_Reference_Method: Vector
Point_and_Vector_Object_Information:
SDTS_Terms_Description:
SDTS_Point_and_Vector_Object_Type: String
Point_and_Vector_Object_Count: 168
Spatial_Reference_Information:
Horizontal_Coordinate_System_Definition:
Geographic:
Latitude_Resolution: 0.00001
Longitude_Resolution: 0.00001
Geographic_Coordinate_Units: Decimal degrees
Geodetic_Model:
Horizontal_Datum_Name: D_WGS_1984
Ellipsoid_Name: WGS_1984
Semi-major_Axis: 6378137.000000
Denominator_of_Flattening_Ratio: 298.257224
Entity_and_Attribute_Information:
Detailed_Description:
Entity_Type:
Entity_Type_Label: video_driftlines_2020-2021.shp
Entity_Type_Definition:
polyline shapefile of video drift transects for three field activities
Entity_Type_Definition_Source: U.S. Geological Survey
Attribute:
Attribute_Label: FID
Attribute_Definition: Internal feature number.
Attribute_Definition_Source: Esri
Attribute_Domain_Values:
Unrepresentable_Domain:
Sequential unique whole numbers that are automatically generated.
Attribute:
Attribute_Label: Shape
Attribute_Definition: Feature geometry.
Attribute_Definition_Source: Esri
Attribute_Domain_Values:
Unrepresentable_Domain: Coordinates defining the features.
Attribute:
Attribute_Label: ID
Attribute_Definition:
Unique identifier for each record per field activity. This identifier was assigned during the initial polyline creation from the Python script. Since the file combines more than one field activity, values can be duplicated.
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0
Range_Domain_Maximum: 92
Attribute:
Attribute_Label: Survey
Attribute_Definition:
Name or number of cruise on which sample collected. The cruise identifier is in the format YYYY-XXX-FA where YYYY is the survey year, XXX is the survey number of that year, and FA is Field Activity.
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Unrepresentable_Domain: Character string.
Attribute:
Attribute_Label: Station
Attribute_Definition:
Sample or station name or number as assigned in the field by the Chief Scientist.
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Unrepresentable_Domain:
Character set. Although numeric, stations could have a decimal number indicating a reoccupation of a station.
Attribute:
Attribute_Label: Year
Attribute_Definition: Year the station was occupied.
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 2020
Range_Domain_Maximum: 2021
Attribute:
Attribute_Label: JD
Attribute_Definition:
Julian day of the video drift based on the date in UTC time at the deployment of the SEABOSS. Julian day is the integer number representing the interval of time in days since January 1 of the year of collection.
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 202
Range_Domain_Maximum: 269
Attribute:
Attribute_Label: LineStart
Attribute_Definition:
Start time of the video drift when the SEABOSS reached the seabed as recorded in the log book, in UTC time in HH:MM:SS.
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Unrepresentable_Domain: Number represented as a text field.
Attribute:
Attribute_Label: LineEnd
Attribute_Definition:
End time of the video drift when the SEABOSS left the seabed as recorded in the log book, in UTC time in HH:MM:SS.
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Unrepresentable_Domain: Number represented as a text field.
Attribute:
Attribute_Label: GPSStart
Attribute_Definition:
Time in the GPS navigation file that is closest to the start time of the video drift as recorded in the log book. UTC time in HH:MM:SS.
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Unrepresentable_Domain: Number represented as a text field.
Attribute:
Attribute_Label: GPSEnd
Attribute_Definition:
Time in the GPS navigation file that is closest to the end time of the video drift as recorded in the log book. UTC time in HH:MM:SS.
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Unrepresentable_Domain: Number represented as a text field.
Distribution_Information:
Distributor:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey - ScienceBase
Contact_Address:
Address_Type: mailing and physical address
Address: Denver Federal Center, Building 810, Mail Stop 302
City: Denver
State_or_Province: CO
Postal_Code: 80225
Country: USA
Contact_Voice_Telephone: 1-888-275-8747
Contact_Electronic_Mail_Address: sciencebase@usgs.gov
Resource_Description:
This dataset contains the video drift lines shapefile (video_driftlines_2020-2021.shp and other files associated with a shapefile). The dataset also includes the browse graphic (video_driftlines_2020-2021_browse.jpg) and the FGDC CSDGM metadata in XML format.
Distribution_Liability:
Unless otherwise stated, all data, metadata and related materials are considered to satisfy the quality standards relative to the purpose for which the data were collected. Although these data and associated metadata have been reviewed for accuracy and completeness and approved for release by the U.S. Geological Survey (USGS), no warranty expressed or implied is made regarding the display or utility of the data for other purposes, nor on all computer systems, nor shall the act of distribution constitute any such warranty.
Standard_Order_Process:
Digital_Form:
Digital_Transfer_Information:
Format_Name: Shapefile
Format_Version_Number: QGIS 3.16.7
Format_Information_Content:
The dataset contains the video drift transects polyline shapefile, browse graphic, and FGDC CSDGM metadata.
Transfer_Size: 1
Digital_Transfer_Option:
Online_Option:
Computer_Contact_Information: Access_Instructions:
The first link is to download all the data in a ZIP file. The second link is to the landing page of the data where individual files can be downloaded. The third link is to the main landing page of the publication.
Digital_Form:
Digital_Transfer_Information:
Format_Name: WMS
Format_Version_Number: 1.3
Format_Information_Content:
Web mapping services of the station summary data - video_driftlines_2020-2021.
Digital_Transfer_Option:
Online_Option:
Computer_Contact_Information: Access_Instructions: Link to the web mapping services on ScienceBase.
Digital_Form:
Digital_Transfer_Information:
Format_Name: WFS
Format_Version_Number: 1.0
Format_Information_Content:
Web feature services of the station summary data - video_driftlines_2020-2021.
Digital_Transfer_Option:
Online_Option:
Computer_Contact_Information: Access_Instructions: Link to the web feature services on ScienceBase.
Fees: none
Technical_Prerequisites:
The ZIP file contains data in Esri shapefile format. The user must software capable of uncompressing the ZIP file and reading the data format.
Metadata_Reference_Information:
Metadata_Date: 20230321
Metadata_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey
Contact_Person: VeeAnn A. Cross
Contact_Position: Marine Geologist
Contact_Address:
Address_Type: mailing and physical address
Address: 384 Woods Hole Rd.
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Contact_Voice_Telephone: 508-548-8700 x2251
Contact_Facsimile_Telephone: 508-457-2310
Contact_Electronic_Mail_Address: whsc_data_contact@usgs.gov
Contact_Instructions:
The metadata contact email address is a generic address in the event the person is no longer with the USGS.
Metadata_Standard_Name: Content Standard for Digital Geospatial Metadata
Metadata_Standard_Version: FGDC-STD-001-1998

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