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USGS Coastal and Marine Geology Program

Field Activity Details for field activity 13DCM01

Other ID: none

Status: Completed

Organization(s): USGS, St. Petersburg Coastal and Marine Science Center

Funding Program(s):

Principal Investigator(s): Christina Kellogg

Affiliate Investigator(s):

Information Specialist(s): Christina Kellogg

Data Type(s): Environmental Data: CTD, Imagery: Photo, Imagery: Video, Sampling: Biology, Sampling: Geology

Scientific Purpose/Goals: To collect biological samples of deep sea corals, benthic sediments, and recover settling plates from previously deployed benthic landers.

Vehicle(s):

Start Port/Location: Charleston, SC

End Port/Location: Norfolk, VA

Start Date: 2013-04-29

End Date: 2013-05-20

Equipment Used: Remotely Operated Vehicle (ROV) Jason, Digital Video, Digital Camera, Camera, Digital, Hand Held, Box Corer, Conductivity, Temperature and Depth (CTD) Logger/Probe

Information to be Derived: Deep sea microbial community diversity

Summary of Activity and Data Gathered:

Staff: Christina Kellogg

Affiliate Staff:

Notes: Additional Equipment Used: Laptop

Location:

Mid-atlantic canyons

Boundaries
North: 39.96028858 South: 31.7305471 West: -74.1345 East: -68.07984233

Platform(s):

Publications

CSA Ocean Sciences Inc., Ross S., Brooke S., Baird E., Coykendall E., Davies A., Demopoulos A., France S., Kellogg C., Mather R., Mienis F., Morrison C., Prouty N., Roark B., Robertson C., 2017, Exploration and Research of Mid-Atlantic Deepwater Hard Bottom Habitats and Shipwrecks with Emphasis on Canyons and Coral Communities: Atlantic Deepwater Canyons Study: , OCS Study BOEM 2017-060. U.S. Dept. of the Interior, Bureau of Ocean Energy Management, Atlantic OCS Region , Sterling, VA, 1000 p. https://espis.boem.gov/final%20reports/5655.pdf.

Goldsmith, D.B., Kellogg, C.A., Morrison, C.L., Gray, M.A., Stone, R.P., Waller, R.G., Brooke, S.D., Ross, S.W., 2018, Comparison of microbiomes of cold-water corals Primnoa pacifica and Primnoa resedaeformis, with possible link between microbiome composition and host genotype: Scientific Reports, Sci Rep, v. 8 no. 1, 12383 p., doi: 10.1038/s41598-018-30901-z.

Kellogg, C., Pratte, Z., 2021, Unexpected diversity of Endozoicomonas in deep-sea corals: Marine Ecology Progress Series, Mar. Ecol. Prog. Ser., v. 673, pp. 1–15, doi: 10.3354/meps13844.

Kellogg, C.A., 2019, Microbiomes of stony and soft deep-sea corals share rare core bacteria: Microbiome, Microbiome, v. 7 no. 1, 90 p., doi: 10.1186/s40168-019-0697-3.

Kellogg, C.A., and Lawler, S.N., 2022, Cold-water coral microbiomes (Anthothela spp.) from Baltimore and Norfolk Canyons: raw and processed data (ver. 2.0, April 2022): U.S. Geological Survey data release, https://doi.org/10.5066/F7CZ356K.

Kellogg, C.A., Goldsmith, D.B., 2018, Cold-water coral microbiomes (Primnoa spp.) from Gulf of Alaska, Baltimore Canyon, and Norfolk Canyon: Raw data: U.S. Geological Survey data release, https://doi.org/10.5066/F7P55KMJ.

Kellogg, C.A., Lawler, S.N., 2015, Cold-water coral microbiomes (Anthothela spp.) from Baltimore and Norfolk Canyons: raw and processed data: U.S. Geological Survey data release, https://doi.org/10.5066/F7CZ356K.

Kellogg, C.A., Voelschow, J.J., 2021, Cold-water coral microbiomes (Acanthogorgia spp., Desmophyllum dianthus, and Lophelia pertusa) from the Gulf of Mexico and Atlantic Ocean off the southeast coast of the United States-raw data: U.S. Geological Survey data release, https://doi.org/10.5066/P9Z1HPKR.

Lawler, S.N., Kellogg, C.A., France, S.C., Clostio, R.W., Brooke, S.D., Ross, S.W., 2016, Coral-associated bacterial diversity is conserved across two deep-sea Anthothela species: Frontiers in Microbiology, v. 7, doi: 10.3389/fmicb.2016.00458.

Portals/Viewers

Data Acquired

Survey EquipmentSurvey InfoData Type(s)Data Collected
Remotely Operated Vehicle (ROV) Jason --- Surveys (biological)
Photo
Video
Biology
Geology
Single Beam
Ground Truthing
Species ID
Digital Video --- Video
Digital Camera --- Photo
Video
Camera, Digital, Hand Held --- Photo
Box Corer --- Biology
Geology
raw_data.zip (Zip file containing raw sequencing data, MIMARKS-compliant sampling and laboratory process metadata)
processed_data.zip (Zip file containing processed data files (QIIME), MIMARKS-compliant sampling and laboratory process metadata)
Conductivity, Temperature and Depth (CTD) Logger/Probe --- CTD

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