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USGS Coastal and Marine Hazards and Resources Program

Field Activity Details for field activity 2021-313-FA

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Other ID: none

Status: Completed

Organization(s): USGS, Pacific Coastal and Marine Science Center, National Oceanic and Atmospheric Administration

Funding Program(s):

Principal Investigator(s): Kimberly Yates, David Zawada

Affiliate Investigator(s): Jon Warrick (PCMSC) Gerry Hatcher (PCMSC) Megan Fraser (NOAA) Lisa Symons (NOAA) Andrew Bruckner (NOAA)

Information Specialist(s): Christine Kranenburg

Data Type(s): Imagery: Photo

Scientific Purpose/Goals: Collect SQUID-5 imagery for structure-from-motion processing as part of collaboration with NOAA's Mission: Iconic Reefs project

Vehicle(s):

Start Port/Location: St. Petersburg, FL

End Port/Location: St. Petersburg, FL

Start Date: 2021-05-04

End Date: 2021-05-20

Equipment Used: SQUID-5, Other

Information to be Derived: Digital images, point clouds, DEMs

Summary of Activity and Data Gathered: This field work was led by Jon Warrick (PCMSC). See data release https://cmgds.marine.usgs.gov/data-releases/datarelease/10.5066-P93RIIG9/

Staff: Christine Kranenburg, Hunter Wilcox

Affiliate Staff:

Notes:

Location:

Eastern Dry Rocks reef off the coast of Key West, FL

Boundaries
North: 24.64701716 South: 24.35710549 West: -82.01840786 East: -81.80420747

Platform(s):

Publications

Hatcher, G.A., Kranenbug, C.J., Warrick, J.A., Bosse, S.T., Zawada, D.G., Yates, K.K., and Johnson, S.A., 2022, Overlapping seabed images and location data acquired using the SQUID-5 system at Eastern Dry Rocks coral reef, Florida, in May 2021, with derived point cloud, digital elevation model and orthomosaic of submerged topography: U.S. Geological Survey data release, https://doi.org/10.5066/P93RIIG9.

Portals/Viewers

Data Acquired

Survey EquipmentSurvey InfoData Type(s)Data Collected
SQUID-5 --- Photo
Bathymetric digital elevation model (DEM) of Eastern Dry Rocks coral reef, Florida, 2021 (A digital elevation model (DEM) was created from underwater images collected at Eastern Dry Rocks coral reef near Key West, Florida, in May 2021 using the SQUID-5 camera system. The underwater images were processed using Structure-from-Motion (SfM) photogrammetry techniques into a classified two-class ('unclassified' and 'low noise') 3D point cloud. The DEM was derived in Metashape (ver. 1.6.5) from the point cloud, but it excludes the 'low noise' class. The DEM covers a rectangular area of seafloor approximately 800x160 meters (0.12 square kilometers) in size and was saved as a tiled GeoTIFF raster at 1-cm resolution.)
GNSS locations of seabed images collected at Eastern Dry Rocks coral reef, Florida, 2021 (This text file (SQUID5_EDR_2021_Image_Locations.txt) provides the GNSS antenna location for underwater images collected at Eastern Dry Rocks coral reef, near Key West, Florida, in May 2021, using the SQUID5 Structure-from-Motion (SfM) system, a towed-surface vehicle with five downward-looking underwater cameras developed by the U.S. Geological Survey. The GNSS antenna location for the time of each image capture is presented with greater precision than is stored in the individual image's EXIF header due to decimal place limitations of the EXIF format.)
Point cloud data of Eastern Dry Rocks coral reef, Florida, 2021 (A three-dimensional point cloud (LAZ format) was developed from underwater images collected at Eastern Dry Rocks coral reef near Key West, Florida, in May 2021 using the SQUID-5 camera system and processed using Structure-from-Motion (SfM) photogrammetry techniques. Point cloud data include x,y,z positions, RGB colors, Metashape-computed confidence values, and a two-class classification ('unclassified' and 'low noise') derived from the confidence values. LAS (and its compressed form, LAZ) is an open format developed for the efficient use of point cloud lidar data. A description of the LAZ format and links to software tools for using LAZ files are provided at the USGS website: https://www.usgs.gov/news/3d-elevation-program-distributing-lidar-data-laz-format)
Overlapping seabed images collected at Eastern Dry Rocks coral reef, Florida, 2021 (Underwater images totaling 138,733 in number were collected at Eastern Dry Rocks coral reef, near Key West, Florida, in May 2021, using the SQUID5 Structure-from-Motion (SfM) system, a towed-surface vehicle with five downward-looking underwater cameras developed by the U.S. Geological Survey. The images are organized in zipped files grouped by survey line. The SQUID-5 records images as TIFF (.tif) format to maintain the highest resolution and bit depth. Each image includes EXIF metadata, containing GNSS date, time, latitude, longitude, and altitude of the GNSS antenna mounted on the towed surface vehicle, copyright, keywords, and other fields.)
Orthoimagery of Eastern Dry Rocks coral reef, Florida, 2021 (A seabed orthoimage was developed from underwater images collected at Eastern Dry Rocks coral reef near Key West, Florida, in May 2021 using the SQUID-5 camera system. The underwater images were processed using Structure-from-Motion (SfM) photogrammetry techniques. The orthoimage covers a rectangular area of seafloor approximately 800x160 meters (0.12 square kilometers) in size, and it was created using image-mosaicking methods and saved as a tiled, 5-mm resolution raster.)
Other --- --- ---

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