Suspended sediment concentrations from water samples collected from the shallows and a tidal creek of Northern San Francisco Bay, California, 2022-2023

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Metadata:

Identification_Information:
Citation:
Citation_Information:
Originator: Samantha C. McGill
Originator: Angela C. Tan
Publication_Date: 20240806
Title:
Suspended sediment concentrations from water samples collected from the shallows and a tidal creek of Northern San Francisco Bay, California, 2022-2023
Geospatial_Data_Presentation_Form: Comma-separated values
Series_Information:
Series_Name: data release
Issue_Identification: DOI:10.5066/P1XZFGCX
Publication_Information:
Publication_Place:
Pacific Coastal and Marine Science Center, Santa Cruz, California
Publisher: U.S. Geological Survey
Online_Linkage: https://doi.org/10.5066/P1XZFGCX
Larger_Work_Citation:
Citation_Information:
Originator: Samantha C. McGill
Originator: Jessica R. Lacy
Originator: Joanne C.T. Ferreira
Originator: Daniel J. Nowacki
Originator: Andrew W. Stevens
Originator: Angela C. Tan
Publication_Date: 2024
Title:
Hydrodynamic and sediment transport data from two marshes and adjacent shallows in Northern San Francisco Bay, California 2022-2023
Series_Information:
Series_Name: data release
Issue_Identification: DOI:10.5066/P1XZFGCX
Publication_Information:
Publication_Place:
Pacific Coastal and Marine Science Center, Santa Cruz, California
Publisher: U.S. Geological Survey
Other_Citation_Details:
Suggested Citation: McGill, S.C., Lacy, J.R., Ferreira, J.C.T., Nowacki, D.J., Stevens, A.W., and Tan, A.C., 2024, Hydrodynamic and sediment transport data from two marshes and adjacent shallows in Northern San Francisco Bay, California 2022-2023: U.S. Geological Survey data release, https://doi.org/10.5066/P1XZFGCX.
Online_Linkage: https://doi.org/10.5066/P1XZFGCX
Description:
Abstract:
Water samples were collected in San Pablo Bay, Corte Madera Bay, and a tidal creek in Corte Madera Marsh between April 2022 and June 2023 to measure suspended-sediment concentrations and percent carbon of suspended sediment. The water samples were collected near the USGS instrument platforms (see time-series data page) with a peristaltic pump, via a Niskin sampler, or directly with a sample bottle.
Purpose:
These data were collected to calibrate turbidity data from optical backscatter sensors to suspended-sediment concentration and to quantify the carbon content suspended sediment in Corte Madera Marsh tidal creek. These data were collected as part of a study with the goal to produce information useful for prioritizing marsh restoration sites, assessing restoration actions, and understanding mechanisms of sediment delivery to marshes. These data are intended for researchers, students, policy makers, and the general public.
Supplemental_Information:
Information about the data collection field activities can be found at: https://cmgds.marine.usgs.gov/fan_info.php?fan=2022-619-FA https://cmgds.marine.usgs.gov/fan_info.php?fan=2023-603-FA Any use of trade, product, or firm names is for descriptive purposes only and does not imply endorsement by the U.S. Government.
Time_Period_of_Content:
Time_Period_Information:
Range_of_Dates/Times:
Beginning_Date: 20220412
Ending_Date: 20230602
Currentness_Reference: ground condition
Status:
Progress: Complete
Maintenance_and_Update_Frequency: None planned
Spatial_Domain:
Bounding_Coordinates:
West_Bounding_Coordinate: -122.50600
East_Bounding_Coordinate: -122.44405
North_Bounding_Coordinate: 38.11239
South_Bounding_Coordinate: 37.92245
Keywords:
Theme:
Theme_Keyword_Thesaurus: USGS Metadata Identifier
Theme_Keyword: USGS:99838cb5-0512-4173-9365-d898991d79bf
Theme:
Theme_Keyword_Thesaurus: ISO 19115 Topic Category
Theme_Keyword: oceans
Theme:
Theme_Keyword_Thesaurus: Data Categories for Marine Planning
Theme_Keyword: Water-Quality Parameters
Theme:
Theme_Keyword_Thesaurus: USGS Thesaurus
Theme_Keyword: suspended material (water)
Theme_Keyword: field sampling
Theme_Keyword: water sampling
Theme_Keyword: marine water quality
Theme_Keyword: suspended material (water)
Theme:
Theme_Keyword_Thesaurus: Marine Realms Information Bank (MRIB) keywords
Theme_Keyword: water sampling
Theme:
Theme_Keyword_Thesaurus: None
Theme_Keyword: USGS
Theme_Keyword: U.S. Geological Survey
Theme_Keyword: PCMSC
Theme_Keyword: Pacific Coastal and Marine Science Center
Theme_Keyword: CMHRP
Theme_Keyword: Coastal and Marine Hazards and Resources Program
Place:
Place_Keyword_Thesaurus: Geographic Names Information System
Place_Keyword: San Francisco Bay
Place_Keyword: Sonoma County
Place_Keyword: Marin County
Place_Keyword: State of California
Place_Keyword: San Pablo Bay
Place:
Place_Keyword_Thesaurus: none
Place_Keyword: San Pablo Bay National Wildlife Refuge
Place_Keyword: Corte Madera Bay
Place_Keyword: Corte Madera Marsh
Access_Constraints: No access constraints
Use_Constraints:
USGS-authored or produced data and information are in the public domain from the U.S. Government and are freely redistributable with proper metadata and source attribution. Please recognize and acknowledge the U.S. Geological Survey (USGS) as the originator of the dataset and in products derived from these data.
Point_of_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization:
U.S. Geological Survey, Pacific Coastal and Marine Science Center
Contact_Person: PCMSC Science Data Coordinator
Contact_Address:
Address_Type: mailing and physical
Address: 2885 Mission Street
City: Santa Cruz
State_or_Province: CA
Postal_Code: 95060
Contact_Voice_Telephone: 831-460-4747
Contact_Electronic_Mail_Address: pcmsc_data@usgs.gov
Cross_Reference:
Citation_Information:
Originator: Edythe E. Engleman
Originator: Larry L. Jackson
Originator: Daniel R. Norton
Publication_Date: 1985
Title:
Determination of carbonate carbon in geological materials by coulometric titration
Other_Citation_Details:
Engleman, E.E., Jackson, L.L., and Norton, D.R., 1985, Determination of carbonate carbon in geological materials by coulometric titration: Chemical Geology, v. 53, p. 125-128.
Online_Linkage: https://doi.org/10.1016/0009-2541(85)90025-7
Data_Quality_Information:
Attribute_Accuracy:
Attribute_Accuracy_Report:
Data values are within the expected value range and have been used to calibrate coincident turbidity measurements in the file: NBM_Turbidity_to_SSC_calibration_constants.csv. This file can be found in the support files for the time series data section of this data release.
Logical_Consistency_Report:
Data values are within the expected values for suspended sediment in bay and tidal creek environments.
Completeness_Report:
Dataset is considered complete for the information presented, as described in the abstract. Users are advised to read the rest of the metadata record carefully for additional details. Specific field notes were retained in the file to support further use of the data.
Positional_Accuracy:
Horizontal_Positional_Accuracy:
Horizontal_Positional_Accuracy_Report:
Horizontal accuracy derived from GPS instrumentation is better than 5 meters (m).
Vertical_Positional_Accuracy:
Vertical_Positional_Accuracy_Report:
No formal positional accuracy tests were conducted. Pumped samples were collected with the intake valve at a fixed height on the sampling frame either resting on the seabed or suspended from the vessel. Samples collected via Niskin and/or grab methods have poorer positional accuracy as the Niskin sampler and bottles used for the grab method have larger diameters, ranging from 10.2 centimeters (cm) to 5.2 cm for the Niskin sampler and grab bottles, respectively.
Lineage:
Process_Step:
Process_Description:
Water samples were collected periodically between April 2022 and June 2023 using a peristaltic pump, Niskin bottle, or sample bottle. Sampling positions were recorded using a hand-held global navigation satellite system (GNSS) receiver. Samples were placed in cold storage until processed.
Process_Date: 20230602
Process_Step:
Process_Description:
The suspended sediment concentrations of the samples were determined in the USGS Pacific Coastal and Marine Science Center sediment lab. Suspended sediment concentrations were determined by a filtering a known, subsampled volume of sample through a pre-weighed filter, which is then dried and reweighed to determine the mass of suspended sediment on the filter. Suspended sediment concentrations were calculated by subtracting the weight of the filter from the weight of the reweight (post filtering) filter. The resulting weight (in milligrams) is divided by the volume of sample filtered (in liters) to get the concentration of suspended sediments.
Process_Date: 20230615
Process_Step:
Process_Description:
The suspended sediment carbon analysis was performed by the PCMSC sediment and carbon labs employing a coulometric titration technique described in Engleman and others (1985) and UIC operating manuals for the UIC CM5200 autosampler furnace, the UIC CM5230 acidification module, and the UIC CM5017 coulometer. Total carbon (TC), total inorganic carbon (TIC), total organic carbon (TOC) and percent calcium carbonate (CaCO3) are reported as percent dry weight. Approximately 1 liter of the water-sediment samples were centrifuged to remove the water and concentrate the sediment. The sediment was dried and pulverized and ready to be processed for percent carbon analysis. For TC analysis, the dried samples were weighed and wrapped in an aluminum capsule then combusted at 950 degrees Celsius in an UIC CM5200 autosampler furnace attached to an UIC CM5017 coulometer. The carbon dioxide (CO2) produced by combusting the sample was then converted to TC by the UIC CM5017 coulometer. For TIC, the dried samples were weighed and loaded into an UIC CM5230 acidification module attached to an UIC CM5017 coulometer. The samples were then digested in a perchloric acid solution, and the CO2 generated was measured and converted to TIC. Two analyses per sample were run and the results were averaged. TOC was calculated by subtracting TIC from TC. The TIC value was then multiplied by 8.333 (the molar stochiometric ratio of CaCO3 to C) to convert TIC to percent CaCO3.
Process_Date: 20230126
Spatial_Data_Organization_Information:
Indirect_Spatial_Reference: Data were collected in San Francisco Bay, California
Direct_Spatial_Reference_Method: Point
Point_and_Vector_Object_Information:
SDTS_Terms_Description:
SDTS_Point_and_Vector_Object_Type: Point
Point_and_Vector_Object_Count: 304
Spatial_Reference_Information:
Horizontal_Coordinate_System_Definition:
Geographic:
Latitude_Resolution: 1.0E-5
Longitude_Resolution: 1.0E-5
Geographic_Coordinate_Units: Decimal degrees
Geodetic_Model:
Horizontal_Datum_Name: World Geodetic System 1984 (WGS84)
Ellipsoid_Name: WGS84
Semi-major_Axis: 6378137.0
Denominator_of_Flattening_Ratio: 298.257223563
Entity_and_Attribute_Information:
Detailed_Description:
Entity_Type:
Entity_Type_Label: NBM22_SSC_percentcarbon_water_sample_data.csv
Entity_Type_Definition:
Table containing attribute information associated with the dataset
Entity_Type_Definition_Source: Producer defined
Attribute:
Attribute_Label: FAN ID
Attribute_Definition: U.S. Geological Survey field activity number (FAN).
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: 2022-619-FA
Enumerated_Domain_Value_Definition:
Samples collected during USGS field activity 2022-619-FA. Additional information about this field activity can be found at https://cmgds.marine.usgs.gov/fan_info.php?fan=2022-619-FA.
Enumerated_Domain_Value_Definition_Source: Producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: 2023-603-FA
Enumerated_Domain_Value_Definition:
Samples collected during USGS field activity 2023-603-FA. Additional information about this field activity can be found at https://cmgds.marine.usgs.gov/fan_info.php?fan=2023-603-FA.
Enumerated_Domain_Value_Definition_Source: Producer defined
Attribute:
Attribute_Label: Sample ID
Attribute_Definition:
Sample identifier in XYY format where X identifies the data series and YY indicates the number in the series. Identical Lab IDs indicates duplicate samples processed by the sediment lab. A forward slash symbol between two sample IDs indicates samples were combined for processing.
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Unrepresentable_Domain: Unique identifier for samples; assigned in the sediment lab.
Attribute:
Attribute_Label: Date Collected
Attribute_Definition: Date in month/day/year format of sample collection.
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 04/12/2022
Range_Domain_Maximum: 06/02/2023
Attribute_Units_of_Measure: Date in month/day/year format
Attribute:
Attribute_Label: Time (UTC)
Attribute_Definition:
Time of sample collection, in hours:minutes:seconds format, Coordinated Universal Time (UTC)
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 00:00:00
Range_Domain_Maximum: 23:59:59
Attribute_Units_of_Measure: hours:minutes:seconds format, Coordinated Universal Time (UTC)
Attribute:
Attribute_Label: Water column location
Attribute_Definition:
The depth relative to the air-water interface or elevation above the bed from which the sample was collected.
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Unrepresentable_Domain:
Values indicating sampling locations within the water column. Values followed by "mbs" were collected in meters below the surface of the water. Values followed by “mab” were collected in meters above the bed. “Surface” indicates a position in the water column close to the air-water interface where specific depth was not recorded.
Attribute:
Attribute_Label: Latitude
Attribute_Definition: Latitude of sample location in decimal degrees, north.
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 37.92245
Range_Domain_Maximum: 38.11239
Attribute_Units_of_Measure: Decimal degrees
Attribute:
Attribute_Label: Longitude
Attribute_Definition: Longitude of sample location in decimal degrees, east.
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: -122.50600
Range_Domain_Maximum: -122.44405
Attribute_Units_of_Measure: Decimal degrees
Attribute:
Attribute_Label: Method
Attribute_Definition: Method of sample collection
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: pumped
Enumerated_Domain_Value_Definition: Samples were collected using a peristaltic pump
Enumerated_Domain_Value_Definition_Source: Producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Niskin
Enumerated_Domain_Value_Definition: Samples were collected using a Niskin sampler
Enumerated_Domain_Value_Definition_Source: Producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: grab
Enumerated_Domain_Value_Definition: Samples were collected using a sample bottle
Enumerated_Domain_Value_Definition_Source: Producer defined
Attribute:
Attribute_Label: Total Depth (m)
Attribute_Definition:
Water depth at time of sampling. "-999" indicates depth was not recorded.
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.80
Range_Domain_Maximum: 3.20
Attribute_Units_of_Measure: meters
Attribute:
Attribute_Label: Sample Notes
Attribute_Definition:
Relevant information regarding the sample during its collection or processing. "NA" indicates no sample notes were taken.
Attribute_Definition_Source: Producer defined
Attribute_Domain_Values:
Unrepresentable_Domain: Unique note of relevant information regarding sample
Attribute:
Attribute_Label: Aliquot Volume mL
Attribute_Definition:
The volume of sample used for the analysis. “-999” indicates that no value was measured.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 35.0
Range_Domain_Maximum: 244.0
Attribute_Units_of_Measure: milliliters
Attribute:
Attribute_Label: Wt. Sediment mg
Attribute_Definition:
The weight of the sediment. “-999” indicates that no value was measured.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 1.62
Range_Domain_Maximum: 57.30
Attribute_Units_of_Measure: milligrams
Attribute:
Attribute_Label: Suspended Sediment Concentration mg/L
Attribute_Definition:
The suspended sediment concentration from the sample. “-999” indicates that no value was calculated.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 8.55
Range_Domain_Maximum: 778.84
Attribute_Units_of_Measure: milligram per liter
Attribute:
Attribute_Label: Percent_Total_Carbon
Attribute_Definition:
Total weight percentage of total carbon for sample. “-999” indicates that no value was measured.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 1.882
Range_Domain_Maximum: 2.602
Attribute_Units_of_Measure: percentage
Attribute:
Attribute_Label: Percent_Total_Organic_Carbon
Attribute_Definition:
Total weight percentage of organic carbon for sample. “-999” indicates that no value was measured.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 1.848
Range_Domain_Maximum: 2.425
Attribute_Units_of_Measure: percentage
Attribute:
Attribute_Label: Percent_Total_Inorganic_Carbon
Attribute_Definition:
Total weight percentage of inorganic carbon for sample. “-999” indicates that no value was measured.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.011
Range_Domain_Maximum: 0.177
Attribute_Units_of_Measure: percentage
Attribute:
Attribute_Label: Percent_Calcium_Carbonate
Attribute_Definition:
Total weight percentage of calcium carbonate (CaCO3) for sample. “-999” indicates that no value was measured.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.089
Range_Domain_Maximum: 1.477
Attribute_Units_of_Measure: percentage
Distribution_Information:
Distributor:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey - CMGDS
Contact_Address:
Address_Type: mailing and physical
Address: 2885 Mission Street
City: Santa Cruz
State_or_Province: CA
Postal_Code: 95060
Contact_Voice_Telephone: 831-427-4747
Contact_Electronic_Mail_Address: pcmsc_data@usgs.gov
Resource_Description:
These data are available in csv format (NBM22_SSC_percentcarbon_water_sample_data.csv) accompanied by CSDGM FGDC-compliant metadata.
Distribution_Liability:
Unless otherwise stated, all data, metadata and related materials are considered to satisfy the quality standards relative to the purpose for which the data were collected. Although these data and associated metadata have been reviewed for accuracy and completeness and approved for release by the U.S. Geological Survey (USGS), no warranty expressed or implied is made regarding the display or utility of the data on any other system or for general or scientific purposes, nor shall the act of distribution constitute any such warranty.
Standard_Order_Process:
Digital_Form:
Digital_Transfer_Information:
Format_Name: comma-delimited text
Format_Version_Number: Microsoft Excel 2002 (12527.20988) 64-bit
Format_Information_Content: file contains the csv table
File_Decompression_Technique: No compression applied
Transfer_Size: 0.0335
Digital_Transfer_Option:
Online_Option:
Computer_Contact_Information:
Network_Address:
Network_Resource_Name: https://doi.org/10.5066/P1XZFGCX
Access_Instructions:
Data can be downloaded using the Network_Resource_Name link and scrolling down to the Environmental Data section.
Fees: None.
Technical_Prerequisites:
The data are available in comma-separated values (CSV) spreadsheet format. Text editing software can be used to open the file, as well as spreadsheet programs, such as Microsoft Excel.
Metadata_Reference_Information:
Metadata_Date: 20240806
Metadata_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person: PCMSC Science Data Coordinator
Contact_Organization:
U.S. Geological Survey, Pacific Coastal and Marine Science Center
Contact_Address:
Address_Type: mailing and physical
Address: 2885 Mission Street
City: Santa Cruz
State_or_Province: CA
Postal_Code: 95060
Country: United States
Contact_Voice_Telephone: 831-427-4747
Contact_Electronic_Mail_Address: pcmsc_data@usgs.gov
Metadata_Standard_Name: Content Standard for Digital Geospatial Metadata
Metadata_Standard_Version: FGDC-STD-001-1998

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