Other ID: none
Status: Completed
Organization(s): USGS, St. Petersburg Coastal and Marine Science Center
Funding Program(s):
Principal Investigator(s): Christina Kellogg
Affiliate Investigator(s):
Information Specialist(s): Christina Kellogg
Data Type(s): Biological Field Study: Experiments (biological), Biological Field Study: Surveys (biological), Sampling: Biology
Scientific Purpose/Goals: To characterize the microbial community associated with the deep-sea coral Lophelia pertusa
Vehicle(s):
Start Port/Location: Key West, FL
End Port/Location: Pensacola, FL
Start Date: 2009-08-18
End Date: 2009-09-12
Equipment Used: Kellogg Sampler
Information to be Derived: Bacterial-community species composition and presence of specific functional genes
Summary of Activity and Data Gathered: Two colonies of the deep-sea coral Lophelia pertusa were sampled from the Ewing wreck and two colonies from the Gulf Penn wreck. Coral tissue was preserved in RNAlater(r) for microbial DNA extraction in St. Petersburg.
Staff: Christina Kellogg
Affiliate Staff:
Notes: Shop Time: Kellogg used the shop to construct two milkcrate-based samplers (4 days, utilized saw, drill, hand tools). Dave Wegner drilled and shaped the container caps (~1 hour).
Location:
Gulf of Mexico
Boundaries | |||
---|---|---|---|
North: 32.66815435 | South: 23.225394 | West: -99.447 | East: -78.97827983 |
Platform(s):
ROV Jason | Ronald H. Brown |
Kellogg, C.A., Goldsmith, D.B., 2018, Cold-water coral metagenomes (Lophelia pertusa) from the Gulf of Mexico and Atlantic Oceanâraw data: U.S. Geological Survey data release, https://doi.org/10.5066/P9AA0H3B.
Survey Equipment | Survey Info | Data Type(s) | Data Collected |
---|---|---|---|
Kellogg Sampler | --- | Experiments (biological) Surveys (biological) Biology | Lophelia_metagenomes_raw_data_1.zip (Zip file containing raw data for CK1-CK6, and MIMS sampling metadata) Lophelia_raw_data.zip (Zip file containing raw data (.fna, .qual, .sff) and MIMARKS metadata. ) Lophelia_metagenomes_raw_data_2.zip (Zip file containing raw data for CK7-CK12, PhiX control, and MIMS sampling metadata.) |