Publications

Coastal and Marine Geology Program publications, listed by year:
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For more publications, search the USGS Publications Warehouse for over 100,000 publications written by USGS scientists.

2006

Ackerman, S.D., Butman, B., Barnhardt, W.A., Danforth, W.W., Crocker, J.M., 2006, High-resolution geologic mapping of the inner continental shelf; Boston Harbor and approaches, Massachusetts: U.S. Geological Survey Open-File Report 2006-1008, DVD-ROM, doi: 10.3133/ofr20061008.

Ackerman, S.D., Butman, B., Denny, J.F., Danforth, W.W., Crocker, J.M., 2006, Using NOAA hydrographic data for high-resolution geologic mapping of the seafloor; Boston Harbor and approaches [abs.]: , Geographic Information Systems and Ocean Mapping in Support of Fisheries Research and Management Conference, Massachusetts Institute of Technology. Cambridge, Mass., 11 April 2006.

Andrews, B.D., 2006, Managing seafloor mapping data using the ArcMarine Data Model [abs.]: , Geographic Information Systems and Ocean Mapping in Support of Fisheries Research and Management Conference, Massachusetts Institute of Technology. Cambridge, Mass., 11 April 2006.

Anima, R.J., Chin, J.L., Conrad, J.E., and Golden, N.E., 2006, Benthic habitat and geologic mapping of the outer continental shelf of north-central California: U.S. Geological Survey Open-File Report 2006-1177, http://pubs.usgs.gov/of/2006/1177.

Asch, R.G., Collie, J.S., Valentine, P.C., 2006, Microhabitat associations between megabenthos and colonial epifauna on Georges Bank [abs.]: , Benthic Ecology Meeting. Quebec City, Canada, 8-12 March 2006.

Asch, R.G., Collie, Jeremy S., Valentine, Page C.,, 2006, How does mobile fishing gear affect epifauna? The role of the physical environment and life history characteristics in mediating responses to disturbance [abs.]: , American Fisheries Society. Narragansett, R.I., 1 January 2006.

Balaram, V., Mathur, R., Banakar, V.K., Hein, J.R., Rao, C.R.M., Rao, T.G., and Dasaram, B., 2006, Determination of the platinum-group elements (PGE) and gold (Au) in ferromanganese nodule reference samples by nickel sulfide fire-assay and Te-coprecipitation with ICP-MS: Indian Journal of Marine Sciences, v. 35, pp. 7–16.

Baldwin, W.E., Morton, R.A., Putney, T.R., Katuna, M.P., Harris, M.S., Gayes, P.T., Driscoll, N.W., Denny, J.F., Schwab, W.C., 2006, Migration of the Pee Dee River system inferred from ancestral paleochannels underlying the South Carolina Grand Strand and Long Bay inner shelf: Bulletin of the Geological Society of America, v. 118, pp. 533–549.

Baldwin, W.E., Morton, R.A., Putney, Thomas R., Katuna, M.P., Harris, M.S., Gayes, P.T., Driscoll, N.W., Denny, Jane F., Schwab, William C.,, 2006, Migration of the Pee Dee River system inferred from ancestral paleochannels underlying the South Carolina Grand Strand and Long Bay inner shelf: Geological Society of America Bulletin, v. 118 no. 5/6.

Barnard, P.L., Hanes, D.M., Lescinski, J., and Elias, E., 2006, Monitoring and modeling nearshore dredge disposal for indirect beach nourishment, Ocean Beach, San Francisco: 30th International Conference on Coastal Engineering, Conference Proceedings, San Diego, CA, 13 p.

Barnard, P.L., Hanes, D.M., Kvitek, R.G., and Iampietro, P.J., 2006, Sand waves at the mouth of San Francisco Bay, California: U.S. Geological Survey Scientific Investigations Map 2944, 5 p., https://pubs.usgs.gov/sim/2006/2944/.

Barnard, P.L., Hanes, D.M., Rubin, D.M., and Kvitek, R.G., 2006, Giant sand waves at the mouth of San Francisco Bay: EOS Transactions, v. 87 no. 29, pp. 285–289, URL: https://doi.org/10.1029/2006EO290003.

Barnard, P.L., 2006, Sand waves of the Golden Gate: 2006 Ecosystem Observations, Monterey Bay National Marine Sanctuary, 2 p.

Barnard, P.L., Owen, L.A. and Finkel, R.C., 2006, Quaternary fans and terraces in the Khumbu Himal south of Mount Everest; their characteristics, age and formation: Journal of the Geological Society, London, v. 163, pp. 383–399.

Barnard, P.L., Owen, L.A., Finkel, R.C. and Asahi, K., 2006, Landscape response to deglaciation in a high relief, monsoon-influenced alpine environment, Langtang Himal, Nepal: Quaternary Science Reviews, v. 25 no. 17-18, pp. 2162–2176.

Barnard, P.L., and Hanes, Daniel M., 2006, Coastal monitoring of the May 2005 dredge disposal offshore of Ocean Beach, San Francisco, Calif. U.S. Geological Survey Open-File Report 2006-1140, http://pubs.usgs.gov/of/2006/1140/.

Barnhardt, W.A., Andrews, B.D., Butman, B., 2006, High-resolution geologic mapping of the inner continental shelf; Nahant to Gloucester, Massachusetts, map sheets 1-5 [abs.]: , Geographic Information Systems and Ocean Mapping in Support of Fisheries Research and Management Conference, Massachusetts Institute of Technology. Cambridge, Mass., 11 April 2006.

Barnhardt, W.A., and Sherrod, B.L., 2006, Sedimentology, Evolution of a Holocene delta driven by episodic sediment delivery and coseismic deformation, Puget Sound, Washington, USA: Sedimentology, v. 53.

Barnhardt, W.A., Andrews, B.D.,, 2006, Mapping the seafloor geology offshore of Massachusetts: U.S. Geological Survey Fact Sheet 2006-3042, 4 p., doi: 10.3133/fs20063042.

Barnhardt, W.A., Andrews, B.D., Butman, B., 2006, High-resolution geologic mapping of the inner continental shelf; Nahant to Gloucester, Massachusetts: U.S. Geological Survey Open-File Report 2005-1293, DVD-ROM, doi: 10.3133/ofr20051293.

Barnhardt, W.A., Baldwin, Wayne D., Denny, Jane F., Schwab, William C., Gayes, P.T., Driscoll, N., Voulgaris, George,, 2006, Integrating high-resolution mapping of the seafloor with sediment-transport measurements to understand coastal erosion in northern South Carolina [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement. San Francisco, Calif., 11-15 December 2006.

Barth, G.A., Scholl, David W. and Childs Jonathan R., 2006, Possible Deep-Water Gas Hydrate Accumulations in the Bering Sea, in Fire in the Ice: DOE hydrate newsletter,, v. 6 no. 3, URL: http://www.netl.doe.gov/technologies/oil-gas/publications/Hydrates/Newsletter/HMNewsFall06.pdf#page=10.

Basu, S., Stuart, F.M., Klemm, V., Korschinek, G., Knie, K., and Hein, J.R., 2006, Helium isotopes in ferromanganese crusts from the central Pacific Ocean: Geochimica et Cosmochimica Acta, v. 70, pp. 3996–4006, doi: 10.1016/j.gca.2006.05.015.

Bernier, J.C., Morton, R.A., Barras, J.A., 2006, Constraining rates and trends of historical wetland loss, Mississippi River delta plain, south-central Louisiana: Coastal environment and water quality: Proceedings of the AIH 25th anniversary meeting and international conference "Challenges in coastal hydrology and water quality", Water Resources Publications, LLC, pp. 371–383, URL: http://coastal.er.usgs.gov/gc-subsidence/historical-wetland-loss.html.

Bothner, M.H., Reynolds, R.L., Casso, M.A., Storlazzi, C.D., and Field, M.E., 2006, Quantity, composition, and source of sediment collected in sediment traps along the fringing coral reef off Molokai, Hawaii: Marine Pollution Bulletin, v. 52 no. 9, pp. 1034–1047, doi: 10.1016/j.marpolbul.2006.01.008.

Bothner, M.H., Reynolds, Richard L., Casso, Michael A., Storlazzi, Curt D., and Field, Michael E., 2006, Quantity, composition, and source of sediment collected in sediment traps along the fringing coral reef off Molokai, Hawaii: Marine Pollution Bulletin, v. 52 no. 9, doi: 10.1016/j.marpolbul.2006.01.008.

Bratton, J.F., Colman, JA., Crusius, J., McCobb, TD., Massey, AJ., Koopmans, DJ., Masterson, JP., 2006, Evidence and implications of a fresh groundwater flow system beneath a shallow coastal estuary in New England [abs.]: , SWIM/SWICA Conference. Cagliari - Chia Laguna, Italy, 24-29 September 2006.

Brock, J., Yates, K., Halley, R., 2006, Integration of coral reef ecosystem process studies and remote sensing: In: Richardson, L.L., LeDrew, E. (Eds.). Remote sensing of aquatic coastal ecosystem processes: science and management applications; Remote sensing and digital image processing 9, Springer, Dordrecht, pp. 111–131, doi: 10.1007/1-4020-3968-9_5.

Brock, J., Zawada, D., 2006, Along-Track Reef Imaging System (ATRIS): U.S. Geological Survey Fact Sheet 2006-3051, 4 p., http://pubs.usgs.gov/fs/2006/3051/.

Brock, J.C., Kuffner, I.B., Wright, C.W., Dunsmore, L., Bonito, V.E., Hickey, T.D., Harris, M.S., 2006, NASA EAARL airborne lidar sensing of morphologic habitat complexity in the northern Florida reef tract [abstract]: Proceedings of the 10th International Coral Reef SymposiumInternational Society for Reef Studies, Okinawa, Japan, June 28-July 2, 2004, URL: http://www.reefbase.org/resource_center/publication/icrs.aspx.

Brock, J.C., Wright, C.W., Kuffner, I.B., Hernandez, R., Thompson, P., 2006, Airborne lidar sensing of massive stony coral colonies on patch reefs in the northern Florida reef tract: Remote Sensing of Environment, v. 104, pp. 31–42.

Brock, J.C., Wright, C.W., Patterson, M., Nayegandhi, A., Patterson, J., 2006, EAARL bare-earth topography - Fire Island National Seashore: U.S. Geological Survey Open-File Report 2006-1384, https://doi.org/10.3133/ofr20061384.

Brock, J.C., Wright, C.W., Patterson, M., Nayegandhi, A., Patterson, J., 2006, EAARL topography: Dry Tortugas National Park: U.S. Geological Survey Open-File Report 2006-1244, https://doi.org/10.3133/ofr20061244.

Brock, J.C., Wright, C.W., Patterson, M., Nayegandhi, A., Patterson, J., Harris, M.S., Mosher, L., 2006, USGS-NPS-NASA EAARL submarine topography, Biscayne National Park: U.S. Geological Survey Open-File Report 2006-1118, https://doi.org/10.3133/ofr20061118.

Brock, J.C., Yates, K.K., Halley, R.B., Kuffner, I.B., Wright, C.W., Hatcher, B.G., 2006, Northern Florida reef tract benthic metabolism scaled by remote sensing: Marine Ecology Progress Series, v. 312, pp. 123–139.

Bruns, T.R., Alpers, C.N., and Carlson, P., 2006, Distribution, thickness, and volume of fine-grained sediment from precipitation of metals from acid-mine waters in Keswick Reservoir, Shasta County, California: U.S. Geological Survey Open-File Report 2006-1377, https://pubs.usgs.gov/of/2006/1377/.

Buczkowski, B.J., Reid, J.A., Jenkins, C.J., Reid, J.M., Williams, S.J., Flocks, J.G., 2006, usSEABED: Gulf of Mexico and Caribbean (Puerto Rico and U.S. Virgin Islands) offshore surficial sediment data release: U.S. Geological Survey Data Series 146, https://doi.org/10.3133/ds146.

Buczkowski, B.J., Reid, J.A., Jenkins, C.J., Reid, J.M., Williams, S.J., Flocks, J.G., 2006, usSEABED; Gulf of Mexico and Caribbean (Puerto Rico and U.S. Virgin Islands) offshore surficial sediment data release: U.S. Geological Survey Data Series 146, version 1.0, doi: 10.3133/ds146.

Buczkowski, B.J., Reid, J.A., Jenkins, C.J., Reid, J.M., Williams, S.J., and Flocks, J.G., 2006, usSEABED: Gulf of Mexico and Caribbean (Puerto Rico and U.S. Virgin Islands) offshore surficial sediment data release: U.S. Geological Survey Data Series 146, 10 p., http://pubs.usgs.gov/ds/2006/146/.

Buster, N., Holmes, C., 2006, Magnesium content within the skeletal architecture of the coral Montastraea faveolata: locations of brucite precipitation and implications to fine-scale data fluctuations: Coral Reefs, v. 25, pp. 243–253.

Butman, B., Alexander, P.S., Scotti, A., Beardsley, R.C., and Anderson, S.P., 2006, Large internal waves in Massachusetts Bay transport sediments offshore: Continental Shelf Research, v. 26 no. 17-18, doi: 10.1016/j.csr.2006.07.022.

Butman, B., Alexander, P.S., Anderson, S.P., Lightsom, F.L., Scotti, A., Beardsley, R.C., 2006, The Massachusetts Bay internal wave experiment, August 1998: data report: U.S. Geological Survey Data Series 85, Version 2.0, DVD-ROM, doi: 10.3133/ds85.

Butman, B., Twichell, D.C., Rona, P.A., Tucholke, B.E., Middleton, T.J., Robb, J.M., 2006, Sea floor topography and backscatter intensity of the Hudson Canyon region offshore of New York and New Jersey: U.S. Geological Survey Open-File Report 2004-1441, Version 2.0, CD-ROM, doi: 10.3133/ofr20041441.

Butman, B., Twichell, David C., Rona, Peter A., Tucholke, Brian E., Middleton, Tammie J., Robb, James M.,, 2006, New maps of the Hudson Canyon and adjacent continental slope and rise [abs.]: , American Geophysical Union/Ocean Sciences Meeting. Honolulu, 20-24 February 2006.

Calderon, K., Dadisman, S.V., Flocks, J.G., Kulp, M.A., Miner, M.D., Wiese, D.S., Kindinger, J.L., Harrison, A.S., 2006, Archive of digital boomer and chirp seismic reflection data collected during USGS cruise 04SCC01, Terrebonne, Timbalier, and Barataria Bays and Lake Pelto, Louisiana, June and July 2004: U.S. Geological Survey Data Series 237, https://doi.org/10.3133/ds237.

Calderon, K., Dadisman, S.V., Kindinger, J.L., Flocks, J., 2006, LASED IMS: Louisiana sedimentary and environmental database internet map server: U.S. Geological Survey, St. Petersburg, FL.

Calderon, K., Dadisman, S.V., Kindinger, J.L., Flocks, J.G., Harris, M.S., Thompson, P.R., 2006, Archive of digital boomer seismic reflection data collected during USGS Cruise 97CCT01 offshore of central South Carolina, June 1997: U.S. Geological Survey Data Series 203, https://doi.org/10.3133/ds203.

Calderon, K., Dadisman, S.V., Kindinger, J.L., Flocks, J.G., Wiese, D.S., Harrison, A.S., 2006, Archive of digital boomer and chirp seismic reflection data collected during USGS cruise 03SCC03, Terrebonne Bay, Louisiana, September 2003: U.S. Geological Survey Data Series 238, https://doi.org/10.3133/ds238.

Calderon, K., Dadisman, S.V., Tihansky, A.B., Lewelling, B.R., Flocks, J.G., Wiese, D.S., Kindinger, J.L., Harrison, A.S., 2006, Archive of digital boomer seismic reflection data collected during USGS field activities 95LCA03 and 96LCA02 in the Peace River of west-central Florida, 1995 and 1996: U.S. Geological Survey Data Series 217, https://doi.org/10.3133/ds217.

Calderon, K., Dadisman, S.V., Yobbi, D.K., McBride, W.S., Flocks, J.G., Wiese, D.S., 2006, Archive of digital boomer seismic reflection data collected during USGS field activity 04SGI01 in the Withlacoochee River of west-central Florida, March 2004: U.S. Geological Survey Data Series 119, https://doi.org/10.3133/ds119.

Calvert, A.J., Ramachandran, K., Kao, H., and Fisher, Michael A., 2006, Local thickening of the Cascadia forearc crust and the origin of seismic reflectors in the uppermost mantle: Tectonophysics, v. 420, pp. 175–188.

Carman, M.R., and Valentine, P.C., 2006, Reducing the impact of the invasive Ascidian Didemnum sp. on the shellfish industry in New England [abs.]: , ICES Symposium on Fishing Technologies in the 21st Century. Boston, MA, October, 2006.

Carniel, S., Sclavo, M., Warner, J.C., 2006, Applying a coupled oceanic-wave-sediment transport model on coastal environments; a case study in the North Adriatic Sea [abs.]: , ECSA 41st International Conference, Measuring and Managing Changes in Estuaries and Lagoons. Venice, 15-20 October 2006.

Carr, R.S., Nipper, Marion, Field, Michael, and Biedenbach, James M., 2006, Coastal circulation and sediment dynamics in Hanalei Bay, Kaua'i, part III, studies of sediment toxicity: U.S. Geological Survey Open-File Report 2006-1147, http://pubs.usgs.gov/of/2006/1147/.

Cetin, K.O., Seed, R.B., Armen Der Kiureghian, M., Tokimatsu, K., Harder, L.F. Jr., Kayen, Robert E., Moss, R.E.S.Cetin, K.O., Seed, R.B., Armen Der Kiureghian, M., Tokimatsu, K., Harder, L.F. Jr., Kayen, Robert E., Moss, R.E.S., 2006, Closure to SPT-based probabilistic and deterministic assessment of seismic soil liquefaction potential: Journal of Geotechnical and Geoenvironmental Engineering, American Society of Civil Engineers, v. 132 no. 4, pp. 432–435.

Chand, S., Minshull, Timothy A., Priest, Jeffrey A., Best, Angus I., Clayton, Christopher R.I., Waite, William F.,, 2006, An effective medium inversion algorithm for gas hydrate quantification and its application to laboratory and borehole measurements of gas hydrate-bearing sediments: Geophysical Journal International, v. 166, doi: 10.1111/j.1365-246X.2006.03038.x.

Chezar, H., and Newman, I., 2006, Overview: DVD-video disc set of seafloor transects during USGS research cruises in the Pacific Ocean: U.S. Geological Survey Open-File Report 2004-1101, https://pubs.usgs.gov/of/2004/1101/.

Childs, J.R., and Stevenson, Andrew J., 2006, Swath bathymetric survey of Englebright Lake, Yuba-Nevada Counties, California: U.S. Geological Survey Open-File Report 2006-1346, http://pubs.usgs.gov/of/2006/1346/.

Cole, M.L., Kroeger, K.D., McClelland, J.W., Valiela, I., 2006, Effects of watershed land use on nitrogen concentrations and d15 nitrogen in groundwater: Biogeochemistry, v. 77, pp. 199–215, doi: 10.1007/s10533-005-1036-2.

Collie, J.S., Valentine, P.C., Anderson, J., Gordon, D., 2006, A small hotspot of benthic biodiversity on the northwest Atlantic continental shelf [abs.]: , ICES Annual Science Conference. Maastricht, Netherlands, 19-23 September, 2006.

Collins, B., Minasian, D., Reiss, T., and Gibbons, H., 2006, USGS Scientists Revisit New Orleans Levee Breaks to Collect High-Accuracy Survey Data: U. S. Geological Survey Sound Waves, May, 2006, https://soundwaves.usgs.gov/2006/05/.

Collins, B.D., and Kayen, Robert, 2006, Applicability of terrestrial LIDAR scanning for scientific studies in Grand Canyon National Park, Arizona: U.S. Geological Survey Open-File Report 2006-1198, http://pubs.usgs.gov/of/2006/1198/.

Collins, B.D., and Kayen, Robert, 2006, Land-based lidar mapping; a new surveying technique to shed light on rapid topographic change: U.S. Geological Survey Fact Sheet 2006-3111, http://pubs.usgs.gov/fs/2006/3111/.

Colman, S.M., Kaufman, D.S., Bright, J., Heil, C., King, J.W., Dean, W.E., Rosenbaum, J.G., Forester, R.M., Bischoff, J.L., Perkins, M., and McGeehin, J.P., 2006, Age model for a continuous, ca 250-ka Quaternary lacustrine record from Bear Lake, Utah-Idaho: Quaternary Science Reviews, v. 25 no. 17-18, doi: 10.1016/j.quascirev.2005.10.015.

Colman, S.M., 2006, Acoustic stratigraphy of Bear Lake, Utah-Idaho; late Quaternary sedimentation patterns in a simple half-graben: Sedimentary Geology, v. 185 no. 1-2, doi: 10.1016/j.sedgeo.2005.11.022.

Condie, S.A., and Sherwood, Christopher R., 2006, Sediment distribution and transport across the continental shelf and slope under idealized wind forcing: Progress in Oceanography, v. 70 no. 2-4, doi: 10.1016/j.pocean.2005.07.003.

Crane, M.P., Xian, G., 2006, Urban growth and seagrass distribution trends in Tampa Bay, Florida: U.S. Geological Survey Professional Paper 1726, pp. 185–188.

Cross, V.A., Bratton, J.F., Bergeron, E., Meunier, J.K., Crusius, J., Koopmans, D., 2006, Continuous resistivity profiling data from the Upper Neuse River Estuary, North Carolina, 2004-2005: U.S. Geological Survey Open-File Report 2005-1306, CD-ROM, doi: 10.3133/ofr20051306.

Cross, V.A., Twichell, D.C., Halley, R.B., Ciembronowicz, K.T., Jarrett, B.D., Hammar-Klose, E.S., Hine, A.C., Locker, S.D., Naar, D.F., 2006, GIS compilation of data collected from the Pulley Ridge deep coral reef region: U.S. Geological Survey Open-File Report 2005-1089, DVD-ROM, doi: 10.3133/ofr20051089.

Crusius, J., Trescott, A., Bratton, J., Koopmans, D.J., 2006, Strengths and limitations of groundwater discharge estimates based on radon and radium isotopes; An example from a small Massachusetts estuary [abs.]: , American Geophysical Union/Ocean Sciences Meeting. Honolulu, 20-24 February 2006.

Culter, J.K., Ritchie, K.B., Earle, S.A., Guggenheim, D.E., Halley, R.B., Ciembronowicz, K.T., Hine, A.C., Jarrett, B.D., Locker, S.D., Jaap, W.C., 2006, Pulley reef: A deep photosynthetic coral reef on the West Florida Shelf, USA: Coral Reefs, v. 25, 228 p.

Dadisman, S., Calderon, K., Wertz, R., Flocks, J., Subino, J., 2006, The geodatabase solution to data management: examples from LASED and XSTORMS [abstract]: In: Henkel, H.S. (Ed.). Proceedings of the first U.S. Geological Survey scientific information management workshop, March 21-23, 2006, U.S. Geological Survey Scientific Investigations Report 2007-5232, St. Petersburg, FL, pp. 68–69, URL: http://pubs.usgs.gov/sir/2007/5232/.

Dadisman, S., Calderon, K., Wertz, R., Flocks, J., Subino, J., 2006, The geodatabase solution to data management: examples from LASED and XSTORMS: 1 p.

Dartnell, P., Barnard, P., Chin, J.L., Hanes, D., Kvitek, R.G., Iampietro, P.J., and Gardner, J.V., 2006, Under the Golden Gate Bridge--Views of the Sea Floor Near the Entrance to San Francisco Bay, CA: U. S. Geological Survey Scientific Investigations Map 2917, http://pubs.usgs.gov/sim/2006/2917/.

Denny, J.F., Danforth, W.W., 2006, USGS, Woods Hole Science Center, sea floor mapping operations [abs.]: , Geographic Information Systems and Ocean Mapping in Support of Fisheries Research and Management Conference, Massachusetts Institute of Technology. Cambridge, Mass., 11 April 2006.

Denny, J.F., O'Brien, Thomas F., Bergeron, Emile, Twichell, David C., Worley, C.R., Danforth, William W., Andrews, B.A., Irwin, B.J.,, 2006, Advances in shallow-water, high-resolution sea-floor mapping; integrating and autonomous surface vessel (ASV) into nearshore geophysical studies [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement, Abstract NS31B-1574. San Francisco, Calif., 11-15 December 2006.

Dillon, W.P., 2006, Oceanic gas hydrate character, distribution, and potential for concentration: , Economic Geology of Natural Gas Hydrates. doi: 10.1007/1-4020-3972-7_4.

Draut, A.E., Clift, P.D., 2006, Sedimentary Processes in Modern and Ancient Oceanic Arc Settings: Evidence from the Jurassic Talkeetna Formation of Alaska and the Mariana and Tonga Arcs, Western Pacific: Journal of Sedimentary Research, v. 76 no. 3, pp. 493–514, doi: 10.2110/jsr.2006.044.

Draut, A.E., Field, M.E., Bothner, M.H., Logan, J.B., Casso, M.A., Baldwin, S.M., and Storlazzi, C.D., 2006, Coastal circulation and sediment dynamics in Hanalei Bay, Kaua'i, part II, tracking recent fluvial sedimentation; isotope stratigraphy obtained in summer 2005: U.S. Geological Survey Open-File Report 2006-1125, 52 p., http://pubs.usgs.gov/of/2006/1125/.

Draut, A., 2006, Studying the Elwha River, Washington, in Preparation for Dam Removal: U. S. Geological Survey Sound Waves, November/December 2006, http://soundwaves.usgs.gov/2006/11/fieldwork3.html.

Draut, A.E., Clift, Peter D., and Blodgett, Robert B., 2006, Field-trip guide to volcanic and volcaniclastic deposits of the Lower Jurassic Talkeetna Formation, Sheep Mountain, south-central Alaska: U.S. Geological Survey Open-File Report 2006-1124, http://pubs.usgs.gov/of/2006/1124/.

Draut, A.E., and Rubin, David M., 2006, Measurements of wind, aeolian sand transport, and precipitation in the Colorado River corridor, Grand Canyon, Arizona; January 2005 to January 2006: U.S. Geological Survey Open-File Report 2006-1188, http://pubs.usgs.gov/of/2006/1188/.

Elfrink, B., Hanes, D.M., Ruessink, B.G., 2006, Parameterization and simulation of near bed orbital velocities under irregular waves in shallow water: Coastal Engineering, v. 53 no. 11, pp. 915–927, doi: 10.1016/j.coastaleng.2006.06.002.

Ellis, S.L., Noji, T.T., Snow-Cotter, S.A., Todd, B.J., Valentine, P.C., Tyrrell, M.C., 2006, Gulf of Maine mapping initiative; a framework for regional fisheries research and management [abs.]: , Geographic Information Systems and Ocean Mapping in Support of Fisheries Research and Management Conference, Massachusetts Institute of Technology. Cambridge, Mass., 11 April 2006.

Embley, R.W., Chadwick, J., W.W., Baker, E.T., Butterfield, D.A., Resing, J.A., de Ronde, C.E.J., Tunnicliffe, V., Lupton, J.E., Juniper, S.K., Rubin, K.H., Stern, R.J., Lebon, G.T., Nakamura, K.-I., Merle, S.G., Hein, J., R., Wiens, D.A., and Tamura, Y., 2006, Long-term eruptive activity at a submarine arc volcano: Nature, v. 441 no. 7092, pp. 494–497.

Erikson, L., Hanes, D.M., Barnard, P.L., and Gibbs, A.E., 2006, Swash zone characteristics at Ocean Beach, CA: 30th International Conference on Coastal Engineering, Conference Proceedings, San Diego, CA, 13 p.

Eshleman, J., Ruggiero, P., Kingsley, E., Gelfenbaum, G., and George, D., 2006, Capitol Lake, Washington, 2004 data summary: U.S. Geological Survey Data Series 180, http://pubs.usgs.gov/ds/2006/180/.

Espinar, V., Wiese, D.S., 2006, Guided to gather - toy plane upgraded with telemetry: GPS World, pp. 20–27, URL: http://www.gpsworld.com/gpsworld/Integration+Challenge/Guided-to-Gather-8212-Toy-Plane-Upgraded-with-Tele/ArticleStandard/Article/detail/301693.

Faris, A.T., Raymond B. Seed, Robert E. Kayen, Jiaer Wu, 2006, A Semi-Empirical Model for the Estimation of Maximum Horizontal Displacement due to Liquefaction-Induced Lateral Spreading: Proceedings of the 8th U.S. National Conference on Earthquake Engineering April 18-22, 2006, San Francisco, California, USA Paper No. 1323.

Fauver, L.A., Thompson, D.M., Howd, P.A., Stockdon, H.F., Sallenger, A.H., Jr., 2006, Evaluation of the SBEACH overwash module on Santa Rosa Island, Florida [poster]: AGU Ocean Sciences MeetingAmerican Geophysical Union, American Society of Limnology and Oceanography, The Oceanographic Society, Honolulu, HI, February 20-24, 2006.

Ferre, B., Durrieu de Madron, X., Estournel, C., Ulses, C., LeCorre, G., 2006, Impact of natural (storm) and anthropogenic (trawl) resuspension on the sediment transport on the Gulf of Lion's Shelf (NW Mediterranean) [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement. San Francisco, Calif., 11-15 December 2006.

Ferre, B., Sherwood, C.R., Wilber, P., 2006, Estimates of sediment transport rates on the Palos Verdes shelf [abs.]: , Eastern Pacific Oceanography Conference. Mt. Hood, Oreg., 27-30 September 2006.

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Garrison, V.H., Foreman, W.T., Genualdi, S., Griffin, D.W., Kellogg, C.A., Majewski, M.S., Mohammed, A., Ramsubhag, A., Shinn, E.A., Simonich, S.A., Smith, G.W., 2006, Saharan dust - a carrier of persistent organic pollutants, metals and microbes to the Caribbean? Revista de Biologia Tropical, v. 54, pp. 9–21.

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George, D.A., Gelfenbaum, Guy, Lesser, Giles, and Stevens, Andrew W., 2006, Deschutes Estuary Feasibility Study; hydrodynamics and sediment transport modeling: U.S. Geological Survey Open-File Report 2006-1318, http://pubs.usgs.gov/of/2006/1318/.

Gibbs, A., Cochran, S., Storlazzi, C., Grossman, E.E., and Field, M., 2006, Coral Habitat Variability in the Kona Coast National Parks: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

Glenn, C.R., Johnson, A.G., Burnett, B., Peterson, R., Dulaiova, H., Grossman, E.E., and Lucey, P., 2006, Thermal Infrared Surveys and Nutrients Reveal Substantial Submarine Groundwater Discharge Systems Emanating from the Kona Coast of Hawaii: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

Goff, J., Liu, P., Higman, B., Morton, R., Jaffe, Bruce E., Fernando, H., Lynett, P., Fritz, H., and Synolakis, C.,, 2006, The December 26, 2004 Indian Ocean tsunami in Sri Lanka: Earthquake Spectra, v. 22 no. S3, S155-S172 p.

Green, D.P.J., Trexler, J.C., Lorenz, J.J., McIvor, C.C., Philippi, T., 2006, Spatial patterns of fish communities along two estuarine gradients in southern Florida: Hydrobiologia, v. 569, pp. 387–399.

Greene, H.G., Murai, L.Y., Watts, P., Maher, N.A., Fisher, M.A., Paull, C.E., and Eichhubl, P., 2006, Submarine landslides in the Santa Barbara Channel as potential tsunami sources: Natural Hazards and Earth System Sciences, v. 6 no. 1, pp. 63–88, doi: 10.5194/nhess-6-63-2006.

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Grober-Dunsmore, R., Kuffner, I.B., Brock, J.C., Bonito, V.E., Hickey, T.D., Harris, M.S., 2006, Integrating geological and ecological disciplines using remote sensing technology to improve our understanding of coral reef community structure across multiple scales [abstract]: Proceedings of the 10th International Coral Reef SymposiumInternational Society for Reef Studies, Okinawa, Japan, June 28-July 2, 2004, URL: http://www.reefbase.org/resource_center/publication/icrs.aspx.

Grossman, E., Hart, P.E., Field, M.E., and Triezenberg, P., 2006, High-resolution chirp seismic reflection data acquired from the Cap de Creus shelf and canyon area, Gulf of Lions, Spain in 2004: U.S. Geological Survey Open-File Report 2006-1247, http://pubs.usgs.gov/of/2006/1247/.

Grossman, E.E., Barnhardt, W.A., Hart, P., Richmond, B.M., and Field, M.E., 2006, Shelf stratigraphy and the influence of antecedent substrate on Holocene reef development, south Oahu, Hawaii: Marine, v. 226.

Grossman, E.E., Hood, W.G., Beamer, E.M., and Kayen, R.E., 2006, Characterizing natural vs. human-related change in Puget Sound deltaic habitats: 2005 Puget Sound Georgia Basin Research Conference, Seattle, WA (Mar 29-31, 2005).

Grossman, E.E., Barnhardt, W.A., Hart, P., Richmond, B.M., Field, M.E., 2006, Shelf stratigraphy and the influence of antecedent substrate on Holocene reef development, south Oahu, Hawaii: Marine Geology, v. 226 no. 1-2, pp. 97–114, doi: 10.1016/j.margeo.2005.09.012.

Grossman, E.E., Eittreim, S.L., Field, M.E., Wong, F.L., 2006, Shallow stratigraphy and sedimentation history during high-frequency sea-level changes on the central California shelf: Continental Shelf Research, v. 26 no. 10, pp. 1217–1239, doi: 10.1016/j.csr.2006.04.001.

Grossman, E.E., Logan, J., Storlazzi, C.S., Paytan, A., and Street, J., 2006, Mapping Groundwater Discharge and Nutrient Flux across the Fringing Reefs of South Molokai and West Hawaii, Main Hawaiian Islands: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

Grossman, E.E., Rosenbauer, R., Takesue, R.K., Wyllie-Echeverria, S., Beamer, E.M., and Hood W.R., 2006, Proximal and distal sedimentation impacts to nearshore habitats in the Skagit Delta and San Juan Islands: American Society for Limnology and Oceanography Summer Meeting, Victoria, British Columbia June 4-9, 2006, A46 p.

Gutierrez, B.T., Williams, S.J., Thieler, E.R., 2006, Assessing potential impacts of sea-level rise to the U.S. coasts [abs.]: , Assateague Shelf and Shore Workshop 2005. Lewes, Dela., 2-11 April 2006.

Gutmacher, C.E., Ross, Stephanie L., Triezenberg, Peter J., Sliter, Ray W., Normark, William R., Edwards, Brian D., 2006, High-resolution boomer seismic-reflection profiles of the shelf off southern California from cruise A-1-00-SC: Santa Monica Bay to San Diego: U.S. Geological Survey Open-File Report 2006-1373, http://pubs.usgs.gov/of/2006/1373/.

Hall, D.K., Williams, R.S., and DiGirolamo, N.E., 2006, MODIS-derived surface temperatures of the Greenland Ice Sheet, 2000-2006 [abs.]: , American Geophysical Union Fall Meeting 2006. San Francisco, 11-15 December, 2006.

Hall, D.K., Williams, R.S., Jr., Casey, K.A., DiGirolamo, N.E., Wan, Z., 2006, Satellite-derived, melt-season surface temperature of the Greenland Ice Sheet (2000-2005) and its relationship to mass balance: Geophysical Research Letters, v. 33 no. 11, doi: 10.1029/2006GL026444.

Hall, D.K., Williams, Richard S., Jr., Casey, Kimberly A., DiGirolamo, Nicolo E., and Wan, Zhengming, 2006, Analysis of satellite-derived surface temperature changes of the Greenland Ice Sheet, 2000-2006, using MODIS data [abs.]: , Geological Society of America 2006 Annual Meeting. Philadelphia, 22-25 October, 2006.

Hamilton, P., Noble, M.A., Largier, J., Rosenfeld, L.K., and Robertson, G., 2006, Cross-shelf subtidal variability in San Pedro Bay during summer, 2001: Continental Shelf Research, v. 26, pp. 681–702.

Hapke, C.J., Reid, David, Richmond, Bruce M., Ruggiero Peter, and List, Jeff,, 2006, National Assessment of Shoreline Change part 3; Historical shoreline change and associated coastal land loss along sandy shorelines of the California coast: U.S. Geological Survey Open-File Report 2006-1219, http://pubs.usgs.gov/of/2006/1219/.

Hapke, C., and Reid, David, 2006, The National Assessment of Shoreline Change; A GIS compilation of vector shorelines and associated shoreline change data for the sandy shorelines of the California coast: U.S. Geological Survey Open-File Report 2006-1251, http://pubs.usgs.gov/of/2006/1251/.

Harney, J., Cochrane, G., Etherington, L., Dartnell, P., Golden, N., and Chezar, H., 2006, Geologic characteristics of benthic habitats in Glacier Bay, southeast Alaska: U.S. Geological Survey Open-File Report 2006-1081, https://doi.org/10.3133/ofr20061081.

Harris, M., Brock, J.C., Nayegandhi, A., Duffy, M., Wright, C.W., 2006, Identification and extraction of the seaward edge of terrestrial vegetation using digital aerial photography: U.S. Geological Survey Open-File Report 2006-1092, 26 p., https://doi.org/10.3133/ofr20061092.

Hart, K.M., Lee, D.S., 2006, The diamondback terrapin: the biology, ecology, cultural history, and conservation status of an obligate estuarine turtle: Studies in Avian Biology, v. 32, pp. 206–213.

Hart, K.M., McIvor, C.C., King, T.L., Crowder, L.B., 2006, Integrating ecology and genetics to define population extent for a continuously-distributed species, diamondback terrapins (Malaclemys terrapin) [poster]: U.S. Geological Survey , St. Petersburg, FL http://sofia.usgs.gov/publications/posters/terrapin_pop/.

Hart, K.M., Mooreside, P., Crowder, L.B., 2006, Interpreting the spatio-temporal patterns of sea turtle stranding: going with the flow: Biological Conservation, v. 129, pp. 283–290.

Hass, K.A., Warner, John C.,, 2006, Comparison of a quasi-three dimensional and a fully three dimensional nearshore circulation model [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement. San Francisco, Calif., 11-15 December 2006.

Hein, C., Fitzgerald, D.M., Barnhardt, Walter A.,, 2006, Reworking of a submerged fluviodeltaic sequence in the Merrimack Embayment, Western Gulf of Maine [abs.]: , Geological Society of America Annual Meeting. Philadelphia, 22-25 October 2006.

Hein, J., McIntyre, B., Edwards, B., and Lakota, O., 2006, Quantitative X-ray Diffraction Mineralogy of Los Angeles Basin Core Samples: U.S. Geological Survey Open-File Report 2006-1036, 31 p., http://pubs.usgs.gov/of/2006/1036/.

Hein, J.R., Normark, W.R., McIntyre, B.R., Lorenson, T.D., Powell, C.L., 2006, Methanogenic calcite, 13C-depleted bivalve shells, and gas hydrate from a mud volcano offshore southern California: Geology, v. 34 no. 2, doi: 10.1130/G22098.1.

Henkel, H., 2006, USGS South Florida Information Access (SOFIA): U.S. Geological Survey , 1 p. http://sofia.usgs.gov.

Hill, P.S., George, D.A., and Grossman, E.E., 2006, A Global Perspective on Defining and Controlling the Mudline,: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

Himmelstoss, E.A., Thieler, E.R., and Hanshaw, M.N., 2006, Monitoring decadal-scale evolution of the inner shelf at Wrightsville Beach, North Carolina using repetitive geophysical surveys [abs.]: , Geological Society of America Annual Meeting. Philadelphia, 22-25 October 2006.

Himmelstoss, E.A., FitzGerald, Duncan M., Rosen, Peter S., and Allen, James R., 2006, Bluff evolution along coastal drumlins; Boston Harbor Islands, Massachusetts: Journal of Coastal Research, v. 22 no. 5, URL: http://www.jcronline.org/doi/abs/10.2112/06A-0005.1?journalCode=coas.

Holmes, C.W., Buster, N.A., Ross, S.W., 2006, Archive in the deep: a 2000-year history of oceanography and climate change recorded in Western North Atlantic deep-sea black corals: National High Magnetic Field Laboratory Report 364.

Hu, C., Muller-Karger, F.E., Swarzenski, P.W., 2006, Hurricanes, submarine groundwater discharge, and Florida's red tides: Geophysical Research Letters, v. 33, L11601 p., doi: 10.1029/2005GL025449.

Hutchinson, D.R., Rowland, R.W., 2006, USGS analysis of the Australian UNCLOS submission: U.S. Geological Survey Open-File Report 2006-1073, Web Only, doi: 10.3133/ofr20061073.

Hutchinson, D.R., Ruppel, C., Collett, T.S., 2006, Gas Hydrates, Salt, and Fluids in the northern Gulf of Mexico, USA [abs.]: , National Geophysical Research Institute, Gas Hydrates-a Potential Source of Energy. Hyderabad, India, 27-28 June 2006.

Hutchinson, D.R., Collett, Timothy S., Ruppel, Carolyn, Roberts, Harry H.,, 2006, Heterogeneity and dynamics in gas hydrate occurrence; lessons learned form the Gulf of Mexico [abs.]: R&D Workshop, Engineering Conferences International, Science and Technology Issues in Methane Hydrate, .

Hutchinson, D.R., Ruppel, Carolyn, Collett, Timothy S., Pohlman, John, Hart, Patrick E., Snyder, Frederick,, 2006, Minibasins and subsurface gas hydrate in the Gulf of Mexico: International Sedimentological Congress, .

Intelmann, S.S., Beaudoin, J., and Cochrane, G.R., 2006, Normalization and characterization of multibeam backscatter; Koitlah Point to Point of the Arches, Olympic Coast National Marine Sanctuary—Survey HMPR-115-2004-03: Marine Sanctuaries Conservation Series MSD-06-03, U.S. Department of Commerce, National Oceanic and Atmospheric Administration, Marine Sanctuaries Division, Silver Spring, Md., 22 p.

Intelmann, S.S., and Cochrane, G.R., 2006, Olympic Coast National Marine Sanctuary habitat mapping; survey report and classification of side scan sonar data from surveys HMPR-114-2004-02 and HMPR-116-2005-01: Marine Sanctuaries Conservation Series MSD-06-07, U.S. Department of Commerce, National Oceanic and Atmospheric Administration, National Marine Sanctuary Program, Silver Spring, Md., 35 p.

Jaffe, B., and Foxgrover, A., 2006, A history of intertidal flat area in South San Francisco Bay, California; 1858 to 2005: U.S. Geological Survey Open-File Report 2006-1262, https://pubs.usgs.gov/of/2006/1262/.

Jaffe, B., and Foxgrover, A., 2006, Sediment deposition and erosion in South San Francisco Bay, California from 1956 to 2005: U.S. Geological Survey Open-File Report 2006-1287, https://pubs.usgs.gov/of/2006/1287/.

Jaffe, B.E., Borrero, J.C., Prasetya, G.S., Peters, R., McAdoo, B., Gelfenbaum, Guy, Morton, Robert, Ruggiero, Peter, Higman, B., Dengler, L., Hidayat, R., Kingsley, Etienne, Kongko, W., Lukijanto, Moore, A., Titov, V., and Yuliantom E., 2006, Northwest Sumatra and offshore islands field survey after the December 2004 Indian Ocean Tsunami: Earthquake Spectra, v. 22 no. S3, S105-S135 p.

Jenkins, C., Flocks, J.G., Kulp, M., 2006, Integration of the stratigraphic aspects of very large sea-floor databases using information processing: In: Rothwell, R. (Ed.). New techniques in sediment core analysis; Geological Society special publication no. 267, Geological Society, Bath, UK, pp. 229–240.

Jimenez, J.A., Sallenger, A.H., Jr., Fauver, L.A., 2006, Sediment transport and barrier island changes during massive overwash events: Coastal Engineering 2006, American Society of Civil Engineers, pp. 2870–2879.

Kayen, R., Pack, R.T., Bay, J., Sugimoto, S., Tanaka, H., 2006, Terrestrial-LIDAR Visualization of Surface and Structural Deformations of the 2004 Niigata Ken Chuetsu, Japan, Earthquake: Earthquake Spectra, v. 22 no. S1, pp. 147–162, doi: 10.1193/1.2173020.

Kayen, R., Brian D. Collins, Gerald Bawden, Robert T. Pack, 2006, Earthquake Deformation Analysis Using Terrestrial Scanning Laser -Lidar Technology: Proceedings of the 8th U.S. National Conference on Earthquake Engineering April 18-22, 2006, San Francisco, California, USA Paper No. 1587.

Kellogg, C., Lisle, J.T., 2006, Microbiology and public beach safety: integrated science for the protection of public health: U.S. Geological Survey Fact Sheet 2006-3045, http://pubs.usgs.gov/fs/2006/3045/.

Kellogg, C.A., 2006, Characterization of microbial communities associated with African desert dust and their implications for human and ecosystem health: Chinese Journal of Geochemistry, v. 25, pp. 218–219.

Kellogg, C.A., Griffin, D.W., 2006, Aerobiology and the global transport of desert dust: Trends in Ecology and Evolution, v. 21, pp. 638–644.

Kim, H.-S., Warner, John C., Voulgaris, George, Work, Paul,, 2006, Impacts of storms on coastal circulation in Long Bay, South Carolina [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement. San Francisco, Calif., 11-15 December 2006.

Kleypas, J.A., Feely, R., Fabry, V., Langdon, C., Sabine, C., Robbins, L.L., 2006, Impacts of ocean acidification on coral reefs and other marine calcifiers a guide for future research: a report of a workshop: University Corporation for Atmospheric Research; California State University; University of Miami Contribution / NOAA Pacific Marine Environmental Laboratory no. 2897, 100 p., http://www.isse.ucar.edu/florida/.

Konrad, C.K., C., Pottsmith, C., Melis, Ted, and Rubin, David M., 2006, Real-time analysis of concentrated fluvial suspended sediments: Federal Interagency Sediment Conference, 8 p.

Kroeger, K.D., Cole, M.L., Valiela, I., 2006, Groundwater-transported dissolved organic nitrogen exports from coastal watersheds: Limnology and Oceanography, v. 51 no. 5, pp. 2248–2261, doi: 10.4319/lo.2006.51.5.2248.

Kroeger, K.D., Cole, M.L., York, J.K., Valiela, I., 2006, Nitrogen loads to estuaries from waste water plumes: Modeling and isotopic approaches: Groundwater, v. 44 no. 2, pp. 188–200, doi: 10.1111/j.1745-6584.2005.00130.x.

Kroeger, K.D., Swarzenski, P.W., Crusius, J., Bratton, J.F., Charette, M.A., 2006, Submarine ground-water discharge: nutrient loading and nitrogen transformations: U.S. Geological Survey Fact Sheet 2006-3110, 4 p., http://pubs.usgs.gov/fs/2006/3110/.

Kroeger, K.D., Swarzenski, P.W., Crusius, J., Bratton, J.F., and Charette, M.A., 2006, Submarine ground-water discharge; nutrient loading and nitrogen transformations: U.S. Geological Survey Fact Sheet 2006-3110, 4 p., doi: 10.3133/fs20063110.

Krohn, M.D., Shah, M., Burress, T.G., Lightsom, F., 2006, Topics in coastal and marine sciences: coastal erosion: U.S. Geological Survey Coastal and Marine Geology Knowledge Management Project.

Kuffner, I.B., Brock, J.C., Grober-Dunsmore, R., Bonito, V.E., Hickey, T.D., Harris, M.S., 2006, Remotely sensed rugosity and relationships with benthic indicators of coral reef condition [abstract]: Proceedings of the 10th International Coral Reef SymposiumInternational Society for Reef Studies, Okinawa, Japan, June 28-July 2, 2004, URL: http://www.reefbase.org/resource_center/publication/icrs.aspx.

Kuffner, I.B., Walters, L.J., Becerro, M.A., Paul, V.J., Ritson-Williams, R., Beach, K.S., 2006, Inhibition of coral recruitment by macroalgae and cyanobacteria: Marine Ecology Progress Series, v. 323, pp. 107–117.

Kulp, M.A., Penland, S., Flocks, J.G., Kindinger, J.L., Ferina, N.F., Dreher, C., 2006, Regional geology, coastal processes, and sand resources in the vicinity of East Timbalier Island, Louisiana: U.S. Geological Survey Open-File Report 2006-1039, 98 p.

Kvenvolden, K.A., 2006, Organic geochemistry - A retrospective of its first 70 years: Organic Geochemistry, v. 37 no. 1, pp. 1–11, doi: 10.1016/j.orggeochem.2005.09.001.

Lee, H., Ryan, H., Kayen, R.E., Haeussler, P.J., Dartnell, P., and Hampton, M.A., 2006, Varieties of submarine failure morphologies of seismically-induced landslides in Alaskan fjords: Norwegian Journal of Geology, v. 86 no. 3, pp. 221–230, URL: http://njg.geologi.no/vol-81-90/details/17/339-339.

Lidz, B.H., 2006, Pleistocene corals of the Florida Keys: Architects of imposing reefs - Why? Journal of Coastal Research, v. 22, pp. 750–759.

Lidz, B.H., Reich, C.D., Peterson, R.L., Shinn, E.A., 2006, New maps, new information; coral reefs of the Florida Keys: Journal of Coastal Research, v. 22, pp. 260–282.

Lisle, J.T., 2006, Microbial ecology in reef sediments of Biscayne National Park: U.S. Geological Survey Fact Sheet 2006-3052, http://pubs.usgs.gov/fs/2006/3052/.

List, J.H., Hanes, D.M., and Ruggiero, P., 2006, Predicting longshore gradients in longshore transport; the CERC formula compared to DELFT3D: ICCE 2006, 30th International Conference on Coastal Engineering, Paper No. 363, .

List, J.H., Farris, Amy S., and Sullivan, Charlene, 2006, Reversing storm hotspots on sandy beaches; spatial and temporal characteristics: Marine Geology, v. 226 no. 3-4, doi: 10.1016/j.margeo.2005.10.003.

List, J.H., Hanes, Daniel M., McNinch, Jesse E., Lescinski, Jamie,, 2006, Modeling coastal change in response to shoreface irregularities [abs.]: , AEos Trans., American Geophysical Union. San Francisco, 11-15 December 2005.

Lorenson, T.D., Colwell, F.S., Delwiche, M., and Dougherty, J.A., 2006, Data report: Acetate and hydrogen concentrations in pore fluids associated with a large gas hydrate reservoir, southern Hydrate Ridge, offshore Oregon, USA: In: Tréhu, A.M., Bohrmann, G., Torres, M.E., and Colwell, F.S. (Eds.). Proceedings of the Ocean Drilling Program: Scientific Results 204Ocean Drilling Program, College Station, TX, doi: 10.2973/odp.proc.sr.204.126.2006.

Martini, M.A., Sherwood, C.R., Horwitz, R., Ramsey, A., Lightsom, F.L., Lacy, J.R., Xu, J., 2006, Hydratools Manual version 1.0, documentation for a MATLAB®-based post-processing package for the Sontek Hydra: U.S. Geological Survey Open-File Report 2005-1026, CD-ROM, doi: 10.3133/ofr20051026.

Martini, M., Butman, Bradford, Ware, Jonathan, Frye, Dan,, 2006, Field tests of acoustic telemetry for a portable coastal observatory [abs.]: , Oceans 2006, 06CH37757C, ISBN: 1-4244-0115-1. Boston, 18-22 September 2006.

Martini, M., Sherwood, Chris, Horwitz, Rachel, Ramsey, Andree, Lightsom, Fran, Lacy, Jessie, and Xu, Jingping, 2006, Hydratools Manual Version 1.0, Documentation for a MATLAB?-Based Post-processing Package for the Sontek Hydra: U.S. Geological Survey Open-File Report 2005-1026, http://pubs.usgs.gov/of/2005/1026/.

Max, M.D., Johnson, A.H., and Dillon, W.P., 2006, Economic geology of natural gas hydrate, Coastal Systems and Continental Margins: Springer, Dordrecht, The Netherlands, v. 9.

Mayor, P.A., Rogers, C.S., Hillis-Starr, Z.M., 2006, Distribution and abundance of elkhorn coral, Acropora palmata, and prevalence of white-band disease at Buck Island Reef National Monument, St. Croix, US Virgin Islands: Coral Reefs, v. 25, pp. 239–242.

McCreedy, C., Miller, J., Charles, C.W., Rogers, C.S., 2006, Response to coral bleaching in U.S. Virgin Islands National Parks: National Parks Service Fact Sheet, 2 p., http://coralreefwatch.noaa.gov/caribbean2005/docs/USGS_NPS_fact_sheet.pdf.

Meckel, T.A., ten Brink, Uri S., Williams, S. Jeffress,, 2006, Estimating present compaction rates in coastal deltaic environments - numerical methods and stratigraphic influences: Geophysical Research Letters, v. 33 no. L11403, doi: 10.1029/2006GL26300.

Meunier, T.K., Williams, R.S., Jr., Ferrigno, J.G., 2006, U.S. Geological Survey scientific activities in the exploration of Antarctica; Introduction to Antarctica (including USGS field personnel; 1946-1959: U.S. Geological Survey Open-File Report 2006-1117, doi: 10.3133/ofr20061117.

Meyers, J.M., Langtimm, C.A., Smith, T.J., III, Pendault-Willett, K., 2006, Wildlife and habitat damage assessment from Hurricane Charley: recommendations for recovery of the J.N. Ding "Darling National Wildlife Refuge Complex": U.S. Geological Survey Open-File Report 2006-1126, iv, 91 p., https://doi.org/10.3133/ofr20061126.

Miller, J., Waara, R., Muller, E., Rogers, C., 2006, Coral bleaching and disease combine to cause extensive mortality on reefs in US Virgin Islands: Coral Reefs, v. 25, 418 p.

Miller, R.L., 2006, Empirical equations for inter-conversion of land-based total solar radiation and photosynthetically active radiation in air and refraction into water with application to Tampa Bay, Florida: Chem-Hydro Science and Consumer Products, LLC , 42 p.

Moore, J., Gutierrez, E.G., Mecray, E.L., Buchholtz ten Brink, M.R., 2006, Physical properties of Long Island Sound sediment cores: U.S. Geological Survey Open-File Report 2002-372, doi: 10.3133/ofr02372.

Moore, L.J., List, J.H., Stolpher, D., Thieler, E.R., Williams, S.J., 2006, Modeling the large-scale morphodynamics of Barrier Island coasts under conditions of rising sea level [abs.]: , American Geophysical Union/Ocean Sciences Meeting. Honolulu, 20-24 February 2006.

Moore, L.J., List, Jeffery H., Williams, S Jeffress, Stolpher, David,, 2006, Modeling large-scale Holocene barrier island morphodynamics and potential future response to sea-level rise, Outer Banks, North Carolina [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement, Abstract H311-08. San Francisco, Calif., 11-15 December 2006.

Morford, J., Martin, William, Kalnejais, Linda, Francois, Roger, Bothner, Michael H., Karle, Ida Maja,, 2006, Insights on geochemical cycling and diagenesis of U, Re and Mo from pore water profiles and benthic chambers from seasonal sampling in Hingham Bay, Massachusetts, USA: Geochimica et Cosmochimica Acta, v. 71 no. 14, doi: 10.1016/j.gca.2006.10.01.

Morton, R.A., Bernier, J.C., Barras, J.A., 2006, Evidence of regional subsidence and associated interior wetland loss induced by hydrocarbon production, Gulf Coast region, USA: Environmental Geology, v. 50, pp. 261–274.

Morton, R.A., Peterson, R.L., 2006, Coastal classification atlas; Central Texas coastal classification maps - Aransas Pass to Mansfield Channel: U.S. Geological Survey Open-File Report 2006-1096, https://doi.org/10.3133/ofr20061096.

Morton, R.A., Peterson, R.L., 2006, Coastal classification atlas; South Texas coastal classification maps - Mansfield Channel to the Rio Grande: U.S. Geological Survey Open-File Report 2006-1133, https://doi.org/10.3133/ofr20061133.

Morton, R.A., Richmond, B.M., Jaffe, B.E., Gelfenbaum, G., 2006, Reconnaissance investigation of Caribbean extreme wave deposits -- preliminary observations, interpretations, and research directions: U.S. Geological Survey Open-File Report 2006-1293, https://doi.org/10.3133/ofr20061293.

Morton, R.A., Sallenger, A.H., Jr., 2006, Coastal hazards: Severe storms and rising seas: American Geological Institute , 12 p.

Morton, R.A., Richmond, Bruce M., Jaffe, Bruce E., and Gelfenbaum, Guy, 2006, Reconnaissance investigation of Caribbean extreme wave deposits; preliminary observations, interpretations, and research directions: U.S. Geological Survey Open-File Report 2006-1293, http://pubs.usgs.gov/of/2006/1293/.

Moss, R.E.S., Seed, R.B., Kayen, Robert E., Stewart, J.P., and Der Kiureghian, 2006, Probabilistic seismic soil liquefaction triggering using the CPT: ASCE Journal of Geotechnical and Geoenvironmental Engineering, v. 132 no. 8, pp. 1032–1051.

Moss, R.E.S., Seed, R.B., Kayen, Robert E., Stewart, J.P., and Der Kiureghian, A., 2006, CPT-based probabilistic assessment of seismic soil liquefaction triggering: Pacific Earthquake Engineering Research Center (PEER) PEER Report 2005/15, April 2006, 80 p.

Nayegandhi, A., Brock, J.C., Wright, C.W., 2006, Deriving vegetation metrics using lidar: Proceedings of the U.S. Geological Survey Sixth Biennial Geographic Information Science Workshop, U.S. Geological Survey Scientific Investigations Report 2006-5094, Denver, Colorado, April 24-28, 2006, 21 p., URL: http://pubs.usgs.gov/sir/2006/5094/.

Nayegandhi, A., Brock, J.C., Wright, C.W., O'Connell, M.J., 2006, Evaluating a small footprint, waveform-resolving lidar over coastal vegetation communities: Photogrammetric Engineering and Remote Sensing, v. 72, pp. 1407–1417.

Nicholson, C., Kennett, J., Sorlien, C., Hopkins, S., Behl, R., Normark, W., Sliter, R., Hill, T., Pak, D., Schimmelmann, A., and Cannariato, K., 2006, Extending the High-Resolution Global Climate Record in Santa Barbara Basin: EOS, Transactions, American Geophysical Union 87, pp. 205–208.

Noble, M., Gartner, A., Paulson, A., Xu, J., Josberger, E., and Curran, C., 2006, Transport pathways in the lower reaches of Hood Canal: U.S. Geological Survey Open-File Report 2006-1001, http://pubs.usgs.gov/of/2006/1001/.

Noble, M.A., Xu, J.P., Robertson, G.L., and Rosenfeld, L.K., 2006, Distribution and sources of surfzone bacteria at Huntington Beach before and after disinfection on an ocean outfall - A frequency-domain analysis: Marine Environmental Research, v. 61 no. 5, pp. 494–510, doi: 10.1016/j.marenvres.2006.02.006.

Normark, W., Piper, D., Sliter, R., Triezenberg, P., and Gutmacher, C., 2006, Digital single-channel seismic-reflection data from western Santa Monica Basin: U.S. Geological Survey Open-File Report 2006-1180, http://pubs.usgs.gov/of/2006/1180/.

Normark, W.R., Piper, D.J.W., Sliter, R., 2006, Sea-level and tectonic control of middle to late Pleistocene turbidite systems in Santa Monica Basin, offshore California: Sedimentology, v. 53 no. 4, pp. 867–897, doi: 10.1111/j.1365-3091.2006.00797.x.

Osterman, L.E., Swarzenski, P.W., Poore, R.Z., 2006, Gulf of Mexico dead zone - the last 150 years: U.S. Geological Survey Fact Sheet 2006-3005, http://pubs.usgs.gov/fs/2006/3005/.

Parsons, T., 2006, M≥7.0 earthquake recurrence on the San Andreas fault from a stress renewal model: Journal of Geophysical Research, v. 111, doi: 10.1029/2006JB004415.

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Patterson, M.E., Rogers, C.S., Schill, W., Miller, J., 2006, Coral bleaching and disease deliver "One-Two Punch" to coral reefs in the US Virgin Islands: National Parks Service Fact Sheet, https://www.nps.gov/viis/naturescience/upload/Coral%20Bleaching%201.pdf.

Paulson, A.J., Konrad, C. P., Frans, L.M., Noble, Marlene A., Kendall, C., Josberger, E.G., Huffman, R.L., and Olsen, T.D., 2006, Freshwater and saline loads of dissolved inorganic nitrogen to Hood Canal and Lynch Cove, western Washington: U.S. Geological Survey Scientific Investigations Report 2006-5106, http://pubs.usgs.gov/sir/2006/5106/.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2006, Coastal vulnerability assessment of Kaloko-Honokohau National Historical Park to sea-level rise: U.S. Geological Survey Open-File Report 2005-1248, Web Only, doi: 10.3133/ofr20051248.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2006, Coastal vulnerability assessment of Point Reyes National Seashore (PORE) to sea-level rise: U.S. Geological Survey Open-File Report 2005-1059, Web Only, doi: 10.3133/ofr20051059.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2006, Relative Coastal Change-Potential Assessment of Kenai Fjords National Park: U.S. Geological Survey Open-File Report 2004-1373, Web Only, doi: 10.3133/ofr20041373.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2006, Relative coastal change-potential assessment of Glacier Bay National Park and Preserve: U.S. Geological Survey Open-File Report 2005-1247, Web Only, doi: 10.3133/ofr20051247.

Pendleton, E.A., Thieler, E. Robert, Williams, S. Jeffress,, 2006, Applying the Coastal Vulnerability Index (CVI) in a variety of geologic settings [abs.]: , Geological Society of America Annual Meeting. Philadelphia, 22-25 October 2006.

Plumlee, G.S., Meeker, G.P., Lovelace, J.K., Rosenbauer, Robert J., Lamothe, P.J., Furlong, E.T., Demas, C.R., and Nilsen, Elena B., 2006, U.S. Geological Survey environmental characterization of flood sediments left in the New Orleans area after Hurricanes Katrina and Rita, 2005-Progress Report: U.S. Geological Survey Open-File Report 2006-1023, 74 p., http://pubs.usgs.gov/of/2006/1023/.

Poag, C.W., 2006, Solving a Chesapeake Bay conumdrum; new clues to the source beds for North American tektites [abs.]: , Geological Society America 2006.

Poe, A., Janicki, A.J., Greening, H., 2006, Baywide environmental monitoring report, 2002-2005: Tampa Bay, Florida: Tampa Bay Estuary Program Technical Publication 06-06, St. Petersburg, FL, URL: https://www.tbeptech.org/TBEP_TECH_PUBS/2006/TBEP_06_06_BEMRFinal.pdf.

Poore, B.S., Chrisman, N.R., 2006, Order from noise: Toward a social theory of geographic information: Annals of the Association of American Geographers, v. 96, pp. 508–523.

Poppe, L.J., Williams, S., and Paskevich, V.F., 2006, USGS east-coast sediment analysis; procedures, database, and GIS data [abs.]: , Joint 8th Federal Interagency Sedimentation Conference and 3rd Federal Interagency Hydrologic Modeling Conference. Reno, Nev., 2-6 April 2006, 7p p.

Poppe, L.J., Ackerman, S.D., Doran, E.F., Beaver, A.L., Crocker, J.M., Schattgen, P.T., 2006, Interpolation of reconnaissance multibeam bathymetry from north-central Long Island Sound: U.S. Geological Survey Open-File Report 2005-1145, DVD-ROM, doi: 10.3133/ofr20051145.

Poppe, L.J., Ackerman, S.D., Doran, E.F., Moser, M.S., Stewart, H.F., Forfinski, N.A., Gardner, U.L., Keene, J.A., 2006, Geologic interpretation and multibeam bathymetry of the sea floor in southeastern Long Island Sound: U.S. Geological Survey Open-File Report 2006-1059, DVD-ROM, doi: 10.3133/ofr20061059.

Poppe, L.J., Foster, D.S., Danforth, W.W., 2006, Character and distribution of exposed glaciodeltaic deposits off outer Cape Cod, Massachusetts, and their affects of hydrogeology and benthic habitats: Geo-Marine Letters, v. 26 no. 1, pp. 51–57, doi: 10.1007/s00367-005-0015-x.

Poppe, L.J., Paskevich, V.F., Butman, B., Ackerman, S.D., Danforth, W.W., Foster, D.S., Blackwood, D.S., 2006, Geological interpretation of bathymetric and backscatter imagery of the sea floor off eastern Cape Cod, Massachusetts: U.S. Geological Survey Open-File Report 2005-1048, DVD-ROM, doi: 10.3133/ofr20051048.

Poppe, L.J., Ackerman, Seth D., Doran, E.F., Beaver, A.J., Crocker, J.M., Schattgen, P.T.,, 2006, Interpolation of reconnaissance multibeam bathymetry from North-central Long Island Sound [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement, Abstract # OS31D-1658. San Francisco, Calif., 11-15 December 2006.

Poppe, L.J., Lewis, R.S., DiGiacomo-Cohen, M.L., Smith, S.M., Stewart, H.F., Forfinski, N.A.,, 2006, Sea floor character and sedimentary processes in eastern Long Island Sound and Northwestern Block Island Sound: Geo-Marine Letters, v. 26.

Poppe, L.J., Paskevich, Valerie F., Foster, David S., Danforth, William W., Ackerman, Seth D.,, 2006, Ecologic and hydrogeologic importance of exposed glaciodeltaic sediments off outer Cape Cod, Massachusetts [abs.]: , Sea Grant Conference on GIS and Ocean Mapping in Support of Fisheries Research and Management. Boston, Mass., 11 April 2006.

Poppe, L.J., Williams, S. Jeffress, Doran, E.F., Moser, M.S., Forfinski, N.A., Stewart, H.F.,, 2006, Sand-wave morphology and sedimentary processes in the vicinity of Six Mile Reef, eastern Long Island Sound [abs.]: , Geological Society of America, Abstracts with Program, Annual Meeting, Paper 87-7. Philadelphia, October 2006.

Poppe, L.J., Williams, S. Jeffress, Paskevich, Valerie F.,, 2006, Textural analysis of marine sediments at the USGS Woods Hole Science Center; methodology and data on DVD: Proceedings of the 8th Federal Interagency Sedimentation Conference, 7 p.

Presto, M.K., Ogston, A.S., Storlazzi, C.D., and Field, M.E., 2006, Temporal and spatial variability in the flow and dispersal of suspended-sediment on a fringing reef flat, Molokai, Hawaii: Estuarine, Coastal and Shelf Science, v. 67 no. 1-2, pp. 67–81, doi: 10.1016/j.ecss.2005.10.015.

Raabe, E., Gauron, L., Katz, B., 2006, Suwannee River Basin and Estuary [poster]: U.S. Geological Survey , 1 p.

Raabe, E., Gauron, L., Sakamoto, M., McIvor, C.C., 2006, Marshland to mangrove: a tale of Tampa Bay, Florida [presentation]: Association of American Geographers annual meetingAssociation of American Geographers, Chicago, IL, March 7-11, 2006.

Raabe, E.A., 2006, Florida shelf habitat (FLaSH) map project: U.S. Geological Survey , St. Petersburg, FL http://coastal.er.usgs.gov/flash/.

Raabe, E.A., 2006, Gulf of Mexico and southeast tidal wetlands satellite imagery: Big Bend wetlands Landsat MSS 1973-1987: U.S. Geological Survey Data Series 201-A, https://pubs.usgs.gov/ds/2006/201/201a/start_here.html.

Raabe, E.A., 2006, Suwanee information gateway 2005-2007 [website]: U.S. Geological Survey , St. Petersburg, FL http://gulfsci.usgs.gov/suwannee/index.html.

Raabe, E.A., Robbins, L.L., Schwarz, M., 2006, FLaSH map - Florida shelf habitat map project presents the world beneath the waves: U.S. Geological Survey , St. Petersburg, FL http://coastal.er.usgs.gov/flash/FLaSH04_07.pdf.

Reich, C., Halley, R.B., Hickey, T., Swarzenski, P., 2006, Groundwater Characterization and Assessment of Contaminants in Marine Areas of Biscayne National Park: U.S. National Park Service Technical Report 2006/356.

Reich, C.D., Halley, R.B., Hickey, T., Swarzenski, P., 2006, Groundwater characterization and assessment of contaminants in marine areas of Biscayne National Park: National Park Service Water Resource Division Technical Report NPS/NRWRD/NRTR-2006/356, http://sofia.usgs.gov/publications/reports/bisc_gw_char/index.html.

Reid, J.A., Reid, J.M., Jenkins, C.J., Zimmermann, M., Williams, S.J., and Field, M.E., 2006, usSEABED: Pacific coast (California, Oregon, Washington) offshore surficial-sediment data release: U.S. Geological Survey Data Series 182, http://pubs.usgs.gov/ds/2006/182/.

Reid, J.A., Reid, J.M., Jenkins, C.J., Zimmermann, M., Williams, S.J., Field, M.E., 2006, usSEABED: Pacific Coast (California, Oregon, Washington) Offshore Surficial-Sediment Data Release: U.S. Geological Survey Data Series 182.

Richey, J.N., Poore, R.Z., Flower, B.P., Quinn, T.M., 2006, Natural climate variability over the last 1400 years from Gulf of Mexico sediments [poster]: 1 p.

Richmond, B.M., Jaffe, B.E., Gelfenbaum, G., Morton, R.A., 2006, Geologic impacts of the 2004 Indian ocean tsunami on Indonesia, Sri Lanka, and the Maldives: In: Scheffers, A., and Kelletat, D. (Eds.), Zeitschrift für Geomorphologie, Supplementbände. Tsunamis, Hurricanes and Neotectonics as Driving Mechanisms in Coastal Evolution: Proceedings of the Bonaire Field Symposium, March 2-6, 2006, A contribution to IGCP 495, Stuttgart, Germany, , pp. 235–251.

Richmond, B.M., Jaffe, B.E., Gelfenbaum, G., and Morton, R.A., 2006, Geologic Impacts of the 2004 Indian Ocean Tsunami on Indonesia, Sri Lanka, and the Maldives: In: Scheffers, A., and Kelletat, D. (Eds.), Zeitschrift für Geomorphologie, Supplementbände. Tsunamis, Hurricanes and Neotectonics as Driving Mechanisms in Coastal Evolution: Proceedings of the Bonaire Field Symposium, March 2-6, 2006, A contribution to IGCP 495, Stuttgart, Germany, , pp. 235–251.

Robbins, L., Raabe, E., Hansen, M., 2006, FLaSH Map- Florida shelf habitat mapping project [poster]: U.S. Geological Survey , St. Petersburg, FL, 1 p.

Roger, J.N., Kelley, J.T., Belknap, D.F., Gontz, A., Barnhardt, W.A., 2006, Shallow-water pockmark formation in temperate estuaries: A consideration of origins in the western gulf of Maine with special focus on Belfast Bay: Marine Geology, v. 225 no. 1-4, doi: 10.1016/j.margeo.2005.07.011.

Rogers, C., Spitzack, T., Muller, E., 2006, A closer look at elkhorn coral (Acropora palmata) on two reefs in Virgin Islands National Park: The role of disease, physical breakage, predation, and competition: U.S. Geological Survey Report to Disney Wildlife Conservation Fund, 8 p.

Rogers, C.S., Miller, J., 2006, Permanent 'phase shifts' or reversible declines in coral cover? Lack of recovery of two coral reefs in St. John, US Virgin Islands: Marine Ecology Progress Series, v. 306, pp. 103–114.

Rosenfeld, L.K., McGee, C., Robertson, G., Noble, M.A., and Jones, B., 2006, Temporal and spatial variability of fecal indicator bacteria in the surf zone off Huntington Beach, CA: Marine Environmental Research, v. 61 no. 5, pp. 471–493.

Rubin, D.M., 2006, Ripple Effect: Unforeseen Applications of Sand Studies: Eos, v. 87 no. 30, pp. 293–297.

Rubin, D.M., and Carter, C.L., 2006, Bedforms and cross-bedding in animation: SEPM Atlas Series, no. 2, DVD.

Rubin, D.M., Chezar, Henry, Harney, Jodi N., Topping, David J., Melis, Theodore S., and Sherwood, Christopher R., 2006, Underwater microscope for measuring spatial and temporal changes in bed-sediment grain size: U.S. Geological Survey Open-File Report 2006-1360, http://pubs.usgs.gov/of/2006/1360/.

Rubin, D.M., and Carter, Carissa L., 2006, Cross-bedding, bedforms, and paleocurrents: SEPM Concepts in Sedimentology and Paleontology, v. 1, 195 p.

Rutchey, K., Schall, T.N., Doren, R.F., Atkinson, A., Ross, M.S., Jones, D.T., Madden, M., Vilchek, L., Bradley, K.A., Snyder, J.R., Burch, J.N., Pernas, T., Witcher, B., Pyne, M., White, R., Smith, T.J., III, Sadle, J., Smith, C.S., Patterson, M.E., Gann, G.D., 2006, Vegetation classification for South Florida natural areas: U.S. Geological Survey Open-File Report 2006-1240, https://doi.org/10.3133/ofr20061240.

Ryan, H.F., and Noble, M.A., 2006, Alongshore wind forcing of coastal sea level as a function of frequency: Journal of Physical Oceanography, v. 36 no. 11, pp. 2173–2184.

Sallenger, A.H., Jr., Stockdon, H.F., Fauver, L.A., Hansen, M., Thompson, D.M., Wright, C.W., Lillycrop, J., 2006, Hurricanes 2004: an overview of their characteristics and coastal change: Estuaries and Coasts, v. 29, pp. 880–888.

Schupp, C.A., McNinch, J.E., List, Jeffrey H.,, 2006, Nearshore shore-oblique bars, gravel outcrops, and their correlation to shoreline change: Marine Geology, v. 233.

Scott, S., Atmanand, M.A., Hein, James R., Heydon, D., and Morgan, C., 2006, Mineral deposits in the sea; a future resource: Report of the ECOR (Engineering Committee on Oceanic Resources) Specialist Panel on Marine Mining, London, 23 March, 2006, 13 p.

Scotti, A., Beardsley, Robert C., Butman, Bradford,, 2006, On the interpretation of energy and energy fluxes of nonlinear internal waves; An example from Massachusetts Bay: Journal of Fluid Mechanics, v. 561, doi: 10.1017/S0022112006000991.

Shedd, W.W., Hutchinson, D.R., 2006, Gas hydrate potential of the Mid Atlantic Outer Continental Shelf: Fire in the Ice, U.S. Department of Energy/National Energy Technology Laboratory Newsletter, Fall 2006, v. 6 no. 3, URL: http://www.netl.doe.gov/technologies/oil-gas/publications/Hydrates/Newsletter/HMNewsFall06.pdf.

Sherwood, C.R., 2006, Report of the USGS Coastal and Marine Geology Modeling Workshop, Pacific Marine Science Center, Santa Cruz, CA, March 22-23, 2005: U.S. Geological Survey Open-File Report 2005-1193, doi: 10.3133/ofr20051193.

Sherwood, C.R., Ferre, B., Eganhouse, R.P., Wiberg, P.L., 2006, Evolution of the contaminated sediment deposit on the Palos Verdes shelf; physical chemical, and biological processes [abs.]: , Easter Pacific Oceanography Conference. Mt. Hood, Oreg., 27-30 September 2006.

Sherwood, C.R., Lacy, J.R., Voulgaris, G., 2006, Shear velocity estimates on the inner shelf off Grays Harbor, Washington, USA: Continental Shelf Research, v. 26 no. 17-18, pp. 1995–2018, doi: 10.1016/j.csr.2006.07.025.

Sherwood, C.R., Lacy, Jessica R.,, 2006, Shear velocity estimates on the inner shelf off Grays Harbor, Washington, U.S.A. Continental Shelf Research, , doi: 10.1016/j.csr.2006.07.025.

Sherwood, C.R., Murray, Chris, Sanford, Larry, Warner, John C., Wiberg, Patricia L., Blumber, Alan, Harris, Courtney K., Signell, Richard,, 2006, Cohesive sediment erodibility algorithms in ROMS and sediment test cases and evolution of a mud deposit on the Palos Verdes Shelf [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement. San Francisco, Calif., 11-15 December 2006, URL: http://adsabs.harvard.edu/abs/2006AGUFMOS31A1625S.

Sherwood, C.R., Signell, Richard S., Book, J.W.,, 2006, Bottom stress in the Adriatic Sea [abs.]: , Eos, Transitions, American Geophysical Union/Ocean Sciences Meeting, Abstract OS340-04. Honolulu, 20-24 February 2006.

Shuman, C.A., Hall, D.K., Williams, R.S., Jr., Sigurðsson, O., Jonsdottir, J.F., 2006, Detection of surface-elevation change on Drangajokull, Iceland, from cloud-cleared ICESat profiles and ground GPS survey data [abs.]: , International Glaciological Society Symposium, Cryospheric Indicators of Global Climate Change. Cambridge, England, U.K., 21-25 August 2006.

Signell, R.P., 2006, Techniques and tools for effective collaboration with large model data sets [abs.]: , Eos Trans. AGU, 87(52), Fall Meet. Suppl., Abstract OS31F-01. San Francisco, Calif., 11-15 December 2006.

Smith, J.M., Quinn, T.M., Helmle, K.P., Halley, R.B., 2006, Reproducibility of geochemical and climatic signals in the Atlantic coral Montastraea faveolata: Paleoceanography, v. 21, doi:10.1029/2005PA001187 p.

Smith, T.J., III, Whelan, K.R.T., 2006, Development of allometric relations for three mangrove species in South Florida for use in the Greater Everglades Ecosystem restoration: Wetlands Ecology and Management, v. 14, pp. 409–419.

Smoak, J.M., Krest, J.M., Swarzenski, P.W., 2006, Geochemistry of the Amazon Estuary: Handbook of Environmental Chemistry 5h, Springer, Berlin, pp. 71–90.

Snyder, N.P., Wright, S.A., Alpers, C.N., Flint, L.E., Holmes, C.W., Rubin, D.M., 2006, Reconstructing depositional processes and history from reservoir stratigraphy: Englebright Lake, Yuba River, northern California: Journal of Geophysical Research F: Earth Surface, v. 111.

Snyder, N.P., Wright, S.A., Alpers, C.N., Flint, L.E., Holmes, C.W., and Rubin, D.M., 2006, Reconstructing depositional processes and history from reservoir stratigraphy: Englebright Lake, Yuba River, northern California: Journal of Geophysical Research, v. 111 no. F4, doi: 10.1029/2005JF000451.

Stamski, R.E., and Field, Michael E., 2006, Characterization of sediment trapped by macroalgae on a Hawaiian reef flat: Estuarine, Coastal and Shelf Science, v. 166 no. 1-2, pp. 211–216.

Stein, R.S., Toda, S., Parsons, T., Grunewald, E., 2006, A new probabilistic seismic hazard assessment for greater Tokyo: Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, v. 364 no. 1845, pp. 1965–1988, doi: 10.1098/rsta.2006.1808.

Stockdon, H.F., Holman, R.A., Howd, P.A., Sallenger Jr., A.H., 2006, Empirical parameterization of setup, swash, and runup: Coastal Engineering, v. 53, pp. 573–588.

Stockdon, H.F., Sallenger, A.H., Jr., Holman, R.A., 2006, Predictive capabilities of a simple model for estimating the longshore-variable coastal response to hurricanes [abstract]: Eos, Transactions - American Geophysical Union, v. 87, Os35e-11 p.

Stockdon, H.F., Thompson, D.M., Fauver, L.A., Sallenger, A.H., Jr., 2006, Hindcasting the coastal impact of Hurricane Ivan and assessing future vulnerability to storms [abstract]: Eos, Transactions - American Geophysical Union, v. 87, H31i-02 p.

Storlazzi, C., Presto, M., Logan, J., and Field, M., 2006, Coastal Circulation and Sediment Dynamics in Hanalei Bay, Kauai. PART I: Measurements of waves, currents, temperature, salinity and turbidity: June - August, 2005: U.S. Geological Survey Open-File Report 2006-1085, 35 p., http://pubs.usgs.gov/of/2006/1085/.

Storlazzi, C.D., Brown, E.K., and Field, M.E., 2006, The application of acoustic Doppler current profilers to measure the timing and patterns of coral larval dispersal: Coral Reefs, v. 25 no. 3, pp. 369–381, doi: 10.1007/s00338-006-0121-x.

Storlazzi, C.D., McManus, M.A., Logan, J.B., McLaughlin, B.E., 2006, Cross-shore velocity shear, eddies and heterogeneity in water column properties over fringing coral reefs: West Maui, Hawaii: Continental Shelf Research, v. 26 no. 3, pp. 401–421, doi: 10.1016/j.csr.2005.12.006.

Street, J.H.S., J.H., Grossman, E.E., and Paytan, A., 2006, Submarine Groundwater Discharge and Nutrient Subsidies to the Leeward Shores of Maui, Moloka'i and Hawai'i Estimated Using Radium Isotopes: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

Sullivan, C.M., Warner, J.C., Martini, M.A., Lightsom, F.S., Voulgaris, G., Work, P., 2006, Wave data processing toolbox manual: U.S. Geological Survey Open-File Report 2005-1211, CD-ROM, doi: 10.3133/ofr20051211.

Sullivan, C.M., Warner, J.C., Martini, M.A., Voulgaris, G., Work, P.A., Haas, K.A., Hanes, D., 2006, South Carolina coastal erosion study data report for observations October 2003 - April 2004: U.S. Geological Survey Open-File Report 2005-1429, 2 DVD-ROMs, doi: 10.3133/ofr20051429.

Sullivan, C.M., Warner, John C., Voulgaris, George,, 2006, The influence of storms on circulation and sediment transport in Long Bay, South Carolina, U.S.A. [abs.]: , American Geophysical Union/Ocean Sciences Meeting. Honolulu, 20-24 February 2006.

Swarzenski, P.W., Baskaran, M., 2006, Uranium distribution in the coastal waters and pore waters of Tampa Bay, Florida: Marine Chemistry, v. 102, pp. 252–266.

Swarzenski, P.W., Baskaran, M., Rosenbauer, R.J., Orem, W.H., 2006, Historical trace element distribution in sediments from the Mississippi River delta: Estuaries and Coasts, v. 29, pp. 1094–1107.

Swarzenski, P.W., Burnett, W.C., Greenwood, W.J., Herut, B., Peterson, R., Dimova, N., Shalem, Y., Yechieli, Y., Weinstein, Y., 2006, Combined time-series resistivity and geochemical tracer techniques to examine submarine groundwater discharge at Dor Beach, Israel: Geophysical Research Letters, v. 33, L24405 p.

Swarzenski, P.W., Orem, W.H., McPherson, B.F., Baskaran, M., Wan, Y., 2006, Biogeochemical transport in the Loxahatchee River estuary, Florida: The role of submarine groundwater discharge: Marine Chemistry, v. 101, pp. 248–265.

Tanaka, Y., S. Nagata, K. L. Knudsen, and R. Kayen, 2006, Assessment of Ground Deformation due to Soil Liquefaction in the San Jose, California Area by Using Geotechnical IT: Proceedings of the 8th U.S. National Conference on Earthquake Engineering April 18-22, 2006, San Francisco, California, USA Paper No. 1522.

Thieler, E.R., Ashton, Andrew D.,, 2006, Late Quaternary evolution of the Carolina Capes; Evidence for an early Holocene transition from five capes to four [abs.]: , Geological Society of America Annual Meeting. Philadelphia, 22-25 October 2006.

Thieler, E.R., Himmelstoss, E.A., Zichichi, J.L., and Miller, T.L., 2006, The Digital Shoreline Analysis System: enhanced software for computing shoreline positions from feature- and datum-based shoreline positions [abs.]: , Shoreline Change Conference II: A Workshop on Managing Shoreline Change. Charleston, S.C., 3-5 May 2006.

Thompson, D.M., Stockdon, H.F., 2006, Investigating the relationship between hurricane waves and extreme runup [abstract]: Eos, Transactions - American Geophysical Union, v. 87, Os41b-0596 p.

Thompson, D.M., Stockdon, H.F., 2006, Investigating the relationship between hurricane waves and extreme runup [poster]: U.S. Geological Survey , 1 p.

Thompson, D.M., Stockdon, H.F., Howd, P.A., Sallenger, A.H., Jr., 2006, Hindcasting wave climate for Hurrican Ivan using SWAN [poster]: U.S. Geological Survey , 1 p.

Thornton, E.B., Sallenger, A.H., Jr., Sesto, J., Egley, L., McGee, T., Parsons, R., 2006, Sand mining impacts on long-term dune erosion in southern Monterey Bay: Marine Geology, v. 229, pp. 45–58.

Topping, D.J., Rubin, David M., Schmidt, J.C., Hazel, J., Melis, T.S., Wright, S.A., Kaplinski, M., Draut, A.E., and Breedlove, M.J., 2006, Comparison of sediment-transport and bar-response results from the 1996 and 2004 controlled-flood experiments on the Colorado River in Grand Canyon: Federal Interagency Sediment Conference, 8 p.

Topping, D.J., Wright, S.A., Melis, T.S., and Rubin, David M., 2006, High-resolution monitoring of suspended-sediment concentration and grain size in the Colorado River using laser diffraction instruments and a three-frequency acoustic system: Federal Interagency Sediment Conference, 8 p.

Topping, D.J., Rubin, David M., Schmidt, J.C., Hazel, J.E. Jr., Wright, S.A., Kaplinski, M., Draut, Amy E., and Breedlove, M.J., 2006, Comparison of sediment-transport and bar-response results from the 1996 and 2004 controlled-flood experiments on the Colorado River in Grand Canyon: Proceedings of the Joint Eighth Federal Interagency Sedimentation Conference, Reno, Nevada, April 2-6, 2006.

Tsunami Pilot Study Working Group,, 2006, Seaside, Oregon tsunami pilot study; modernization of FEMA flood hazard maps: U.S. Geological Survey Open-File Report 2006-1234, http://pubs.usgs.gov/of/2006/1234/.

Twichell, D.C., Schwab, William C., Nelson, C. Hans, Kenyon, Neil H.,, 2006, The effects of submarine canyon and proximal fan processes on the distal fan depositional systems of the Mississippi Fan [abs.]: , Geological Society of London and SEPM, External Controls on Deep Water Depositional Systems, Climate, Sea-Level, and Sediment Flux. London, 20-24 February 2006.

U. S. Geological Survey, 2006, National Seafloor Mapping and Benthic Habitat Studies, NW Gulf of Mexico: U. S. Geological Survey Web Page, http://walrus.wr.usgs.gov/pacmaps/wg-index.html.

U. S. Geological Survey, 2006, The December 26, 2004 Indian Ocean Tsunami: Initial Findings on Tsunami Sand Deposits, Damage, and Inundation in Sri Lanka: U. S. Geological Survey Web Page, https://walrus.wr.usgs.gov/tsunami/srilanka05/index.html.

U.S. Geological Survey, 2006, Coastal and marine websites: U.S. Geological Survey Information Sheet, 1 p.

U.S. Geological Survey, 2006, Flood hazards; a national threat: U.S. Geological Survey Fact Sheet 2006-3026, 2 p., http://pubs.usgs.gov/fs/2006/3026/.

U.S. Geological Survey, 2006, Florida integrated science center: U.S. Geological Survey Information Sheet, 2 p.

U.S. Geological Survey, 2006, Tsunami hazards; a national threat: U.S. Geological Survey Fact Sheet 2006-3023, 2 p., http://pubs.usgs.gov/fs/2006/3023/.

Valentine, P.C., Heffron, E.J.,, 2006, Mapping seabed habitats in the Stellwagen Bank National Marine Sanctuary, Gulf of Maine [abs.]: , GeoHab Symposium. Edinburgh, Scotland, 3-6 May 2006.

Vera-Grunauer, X., J.D. Bray, J.M. Pestan, R. Kayen, E. Tandazo, J. Ramirez, J.G. Vera-Grunauer, and W. Mera-Ortiz, 2006, Site Characterization And Seismic Zonation Of Guayaquil City, Ecuador: Proceedings of the 8th U.S. National Conference on Earthquake Engineering April 18-22, 2006, San Francisco, California, USA Paper No. 1467.

Waite, W.F., Gilbert, Lauren Y., Winters, William J., Mason, Dave H.,, 2006, Estimating thermal diffusivity and specific heat from needle probe thermal conductivity data: Review of Scientific Instruments, Paper #044904, .

Waite, W.F., Kneafsey, T.J., Santamarina, C.J., Winters, William J., Yun, T-S, Mason, David H., Ruppel, C.D.,, 2006, Physical property changes in hydrate-bearing sediment samples due to depressurization/repressurization [abs.]: , American Geophysical Union Fall Conference. San Francisco, Calif., 11-15 December 2006.

Waite, W.F., Ruppel, C.D., Kirby, S.H.,, 2006, Comments on 'Thermal and visual time-series at a seafloor gas hydrate deposit on the Gulf of Mexico slope,' by I.R. MacDonald, L.C. Bender, M. Vardaro, B. Bernard, and J.M. Brooks, 2005, Earth and Planetary Science Letters, v. 233, p. 49-59: Earth and Planetary Science Letters, v. 245.

Waite, W.F., Stern, L.A., Winters, William J., Mason, D.H.,, 2006, Simultaneous determination of thermal conductivity, thermal diffusivity and specific heat in sI methane hydrate [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement. San Francisco, Calif., 11-15 December 2006.

Waldrop, W.R., Swarzenski, P.W., 2006, A new tool for quantifying flux rates between ground water and surface water: Coastal hydrology and processes: Proceedings of the AIH 25th anniversary meeting and international conference "Challenges in coastal hydrology and water quality", Water Resources Publications, LLC, pp. 305–311.

Ward, G.A., Smith, T.J., III, Whelan, K.R.T., Doyle, T.W., 2006, Regional processes in mangrove ecosystems: Spatial scaling relationships, biomass, and turnover rates following catastrophic disturbance: Hydrobiologia, v. 569, pp. 517–527.

Warner, J.C., Schoellhamer, D.H., Burau, J.R., and Schladow, S.G., 2006, Flow convergence caused by a salinity minimum in a tidal channel: San Francisco Estuary and Watershed Science, v. 4 no. 3, URL: http://escholarship.org/uc/item/2m6367vc#page-1.

Warner, J.C., and Geyer, W.R., 2006, Residence times in estuaries; a numerical case study [abs.]: , Physics of Estuaries and Coastal Seas. Astoria, OR, 18-22 September, 2006.

Warner, J.C., Sherwood, C.R., Geyer, W.R., 2006, Sensitivity of estuarine turbidity maximum to settling velocity, tidal mixing, and sediment supply, in Maa, J.P.-Y., Sanford, L.P., and Schoellhamer, D.H., eds., Estuarine and Coastal Fine Sediments Dynamics, vol. 8: , Proceedings in Marine Science Estuarine and Coastal Fine Sediments Dynamics. Elsevier Amsterdam, , pp. 355–376, doi: 10.1016/S1568-2692(07)80022-2.

Warner, J.C., Sherwood, Christopher R., Signell, Richard, Arango, Hernan G.,, 2006, Investigating the effects of wave-current interactions on nearshore sediment transport using a coupled three-dimensional sediment, circulation, and wave model. [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement. San Francisco, Calif., 11-15 December 2006.

Warner, J.C., Signell, Richard, Arango, Hernan G.,, 2006, Incorporating nearshore processes into ROMS [abs.]: , Eos, Transitions, American Geophysical Union/Ocean Sciences Meeting Supplement, Abstract OS35D-02. Honolulu, 20-24 February 2006.

Warrick, J.A., and Orzech, K.M., 2006, The effects of urbanization on discharge and suspended-sediment concentrations in a southern California river, in Acevedo, William, Taylor, Janis, Hester, Dave J., Mladinich, Carol S., and Glavac, Sonya, eds., Rates, trends, causes, and consequences of urgan land-use change in the United States: U.S. Geological Survey Professional Paper 1726, pp. 163–170, http://pubs.usgs.gov/pp/pp1726/.

Wertz, R., 2006, CMG Knowledge management project (2921bo8): U.S. Geological Survey , St. Petersburg, FL.

Willard, D.A., Bernhardt, C.E., Holmes, C.W., Landacre, B., Marot, M., 2006, Response of Everglades tree islands to environmental change: Ecological Monographs, v. 76, pp. 565–583.

Williams, S.J., Gutierrez, Benjamin T., Thieler, E. Robert,, 2006, Assessing the potential impacts of sea-level rise to U.S. Coastal regions [abs.]: , Association of Engineering Geologists. Boston, 30 October - 4 November, 2006.

Williams, S.J., Poppe, Lawrence J., Arsenault, Matthew A., Buczkowski, Brian J.,, 2006, Applications of the USGS usSEABED database for regional-scale understanding of the geologic character and aggregate resources of the Atlantic inner continental shelf, Maine to North Carolina [abs.]: , Geographic Information Systems and Ocean Mapping in Support of Fisheries Research and Management Conference, Massachusetts Institute of Technology. Cambridge, Mass., 11 April 2006.

Williams, S.J., Arsenault, M.A., Poppe, L.J. Reid, J.A., Reid, J.M., and C.J. Jenkins, 2006, Surficial Sediment Character of the New York-New Jersey Offshore Continental Shelf Region: A GIS Compilation, U.S. Geological Surve: U.S. Geological Survey Open-File Report 2006-1046, http://pubs.usgs.gov/of/2006/1046/.

Williams, S.J., Arsenault, M.A., Buczkowski, B.J., Reid, J.A., Flocks, J.G., Kulp, M.A., Penland, S., Jenkins, C.J., 2006, Surficial sediment character of the Louisiana offshore continental shelf region: a GIS compilation: U.S. Geological Survey Open-File Report 2006-1195, https://doi.org/10.3133/ofr20061195.

Williams, S.J., Reid, J.A., Jenkins, C.J.,, 2006, Characterization of sedimentary deposits using usSEABED for large-scale mapping, modeling and research of US continental margins [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement. San Francisco, Calif., 11-15 December 2006.

Wingard, C.L., Cronin, T.M., Holmes, C.W., Orem, W., Willard, D.A., 2006, Ecosystem history of Florida Bay and the southwest coast: Comprehensive annual report to Everglades National Park: U.S. Geological Survey , Fort Lauderdale, FL, 112 p. http://sofia.usgs.gov/projects/index.php?project_url=eh_fbswc.

Winters, W.J., Waite, W. F., Mason, D. H. and Gilbert, L. Y.,, 2006, Physical properties of pressurized sediment from hydrate ridge, in Trehu, A.M., Bohrmann, G., Torres, M.E., and Colwell, F.S., eds. Proceedings Ocean Drilling Program, Scientific Results, v. 204, URL: http://www-odp.tamu.edu/publications/204_SR/119/119.htm.

Winters, W.J., Hutchinson, Deborah R., Waite, William F., Mason, David H.,, 2006, Behavior of sediment containing synthetic and natural gas hydrate [abs.]: , 2006 Taiwan Gas Hydrate Workshop. Taipei, Taiwan, 14-17 March 2006.

Winters, W.J., Waite, William F., Mason, David H., Pecher, Ingo A.,, 2006, Grain size effects on acoustic and strength behavior of sediments containing natural- and laboratory-formed methane gas hydrate [abs.]: , Workshop on Science and Technology Issues in Methane Hydrate Research and Development. Kauai, Hawaii, 5-9 March 2006.

Wong, F.L., Venturato, A.J., and Geist, E.L., 2006, Seaside, Oregon, tsunami pilot study--Modernization of FEMA flood hazard maps; GIS Data: U.S. Geological Survey Data Series 236, http://pubs.usgs.gov/ds/2006/236/.

Yanko-Hombach, V., Koral, H., Avsar, N., Motnenko, I., and McGann, Mary,, 2006, Geomorphological, depositional and foraminiferal indicators of Late Quaternary tectonic uplift in Iskenderun Bay, Turkey, in Dilek, Y., and Pavlides, S., eds., Postcollisional tectonics and magmatism in the Mediterranean region and Asia: Geological Society of America Special Paper 409, pp. 591–614.

Yates, K., 2006, Gulf of Mexico Integrated Science Tampa Bay Study [poster]: U.S. Geological Survey , St. Petersburg, 1 p.

Yates, K.K., Halley, R., 2006, CO2- 3 concentration and pCO2 thresholds for calcification and dissolution on the Molokai reef flat, Hawaii: Biogeosciences, v. 3, pp. 1–13.

Yates, K.K., Halley, R., 2006, Diurnal variation in rates of calcification and carbonate sediment dissolution in Florida Bay: Estuaries and Coasts, v. 29, pp. 24–39.

ten Brink, U.S., Al-Zoubi, A.S., Flores, C.H., Rotstein, Y., Qabbani, I., Harder, S.H., and Keller, G.R., 2006, Seismic imaging of deep low-velocity zone beneath the Dead Sea basin and transform fault; Implications for strain localization and crustal rigidity: Geophysical Research Letters, v. 33 no. 24.

ten Brink, U.S., Geist, E.L., Andrews, B.D., 2006, Size distribution of submarine landslides and its implication to tsunami hazard in Puerto Rico: Geophysical Research Letters, v. 33 no. 11, doi: 10.1029/2006gl026125.

ten Brink, U.S., Worley, C.R., Smith, S., Stepka, T., Williams, G.F., 2006, Project PROBE Leg I - report and archive of multibeam bathymetry and acoustic backscatter, CTD/XBT and GPS navigation data collected during USGS Cruise 02051 (NOAA Cruise RB0208) Puerto Rico Trench September 24, 2002, to September 30, 2002: U.S. Geological Survey Open-File Report 2005-1066, DVD-ROM, doi: 10.3133/ofr20051066.

ten Brink, U.S., Geist, Eric L., Andrews, Brian D.,, 2006, Size distribution of submarine landslides and its implication to tsunami hazard in Puerto Rico: Geophysical Research Letters, v. 33 no. L11307, doi: 10.1029/2006GL026125.

ten Brink, U.S., Geist, Eric L., Lynett, Patrick,, 2006, Submarine slides north of Puerto Rico and their tsunami potential, in Mercado, A., Liu, P., eds., Caribbean Tsunami Hazard: , World Scientific Publishers. Singapore.

ten Brink, U.S., Song, Jianli, Bucknam, Robert C.,, 2006, Rupture models for the A.D. 900-930 Seattle fault earthquake from uplifted shorelines: Geology, v. 34.

ten Brink, U.S., Geist, E.L., Lynett, P.J., and Andrews, B.D., 2006, Submarine slides north of Puerto Rico and their tsunami potential, in Mercado, A., and Liu, P., eds., Caribbean tsunami hazard: , Caribbean Tsunami Hazard. World Scientific, Singapore, pp. 67–90 doi: 10.1142/9789812774613_0004.

2005

Ackerman, S.D., Butman, Bradford, Denny, Jane F., Danforth, William W., Andrews, Brian D., Crocker, James,, 2005, High-resolution geologic mapping of Boston Harbor using NOAA hydrographic data [abs.]: Myrtle Beach, S.C., 7-10 March 2005.

Adams, P.N., 2005, Nearshore wave-induced cyclical flexing of sea cliffs: Journal of Geophysical Research, v. 110 no. F2, doi: 10.1029/2004jf000217.

Anderson, D.M., Keafer, B.A., Geyer, W. Rockwell, Signell, Richard P., Loder, T.C.,, 2005, Toxic Alexandrium blooms in the western Gulf of Maine; the plume advection hypothesis revisited: Limnology and Oceanography, v. 50 no. 1.

Anderson, G.H., Smith, T.J., III, 2005, The mangrove hydrology sampling network in Everglades National Park: Hypotheses, network design and data for the Lower Shark River for water years 1996-2002: U.S. Geological Survey Open-File Report 2002-457.

Andrefouet, S., Hockberg, E.J., Chevillon, C., Muller-Karger, F.E., Brock, J.C., Hu, C., 2005, Multi-scale remote sensing of coral reefs: In: van der Meer, F.D., Abrams, M., Curran, P., Dekker, A., de Jong, S.M., Schaepman, M., Miller, R.L., del Castillo, C.E., Mckee, B.A. (Eds.). Remote sensing of coastal aquatic environments: technologies, techniques and applications; Remote sensing and digital image processing v. 7 7, Springer, Dordrecht, pp. 297–315, doi: 10.1007/978-1-4020-3100-7_13.

Andrews, B.D., 2005, Geologic Seafloor mapping using the ArcMarine Data Model [abs.]: , ESRI Users Conference, Poster Session. San Diego, Calif., 25-29 July 2005 URL: http://dusk.geo.orst.edu/djl/arcgis/docs/AdrewsUSGSPoster_ESRI_UC_05.pdf.

Andrews, B.D., Butman, Bradford,, 2005, Mapping the geology of the seafloor: Coastlines, Winter 2004-2005, Massachusetts Office of Coastal Zone Management, .

Anima, R., Clifton, H., Reiss, C., and Wong, F., 2005, Locations and Descriptions of Gravity, Box, and Push Cores Collected in San Francisco Bay Between January and February, 1990 and 1991: U.S. Geological Survey Open-File Report 2005-1453, 69 p., https://pubs.usgs.gov/of/2005/1453/.

Baher, S., 2005, Upper-Crustal Structure of the Inner Continental Borderland near Long Beach, California: Bulletin of the Seismological Society of America, v. 95 no. 5, pp. 1957–1969, doi: 10.1785/0120040051.

Banakar, V.K., Rajani, R.P., and Hein, James R., 2005, Genesis and growth history of ferromanganese encrustations from Afanasiy-Nikitin Seamounts in the equatorial India Ocean: Abstracts and Proceedings, 35th Underwater Mining Institute, 1-6 November, Monterey, California, pp. 9–18.

Barnard, P.L., 2005, Modern processes at the mouth of San Francisco Bay: American Shore and Beach Preservation Association, 2005 Conference Field Trip Guide, 21 p.

Barnard, P.L., and Hanes, D.M., 2005, Integrating field research, modeling and remote sensing to quantify morphodynamics in a high-energy coastal setting, Ocean Beach, San Francisco, California: American Society of Civil Engineers, 5th International Conference on Coastal Dynamics 2005 Conference Proceedings, Barcelona, Spain,, 14 p.

Barnhardt, W.A., Richmond, B.M., Grossman, E.E., Hart, P.,, 2005, Possible modes of coral-reef development at Molokai, Hawaii, inferred from seismic-reflection profiling: Geomarine Letters, v. 25.

Barnhardt, W.A., Richmond, B.M., Grossman, E.E., Hart, P., 2005, Possible modes of coral-reef development at Molokai, Hawaii, inferred from seismic-reflection profiling: Geo-Marine Letters, v. 25 no. 5, pp. 315–323, doi: 10.1007/s00367-005-0214-5.

Barnhardt, W.A., Andrews, Brian D., Butman, Bradford,, 2005, Geologic mapping of the Massachusetts inner continental shelf for science-based management of ocean resources [abs.]: , Geological Society of America. Salt Lake City, Utah, 16-19 October 2005.

Barth, G., 2005, Methane gas volume expansion ratios and ideal gas deviation factors for the deep-water Bering Sea basins: U.S. Geological Survey Open-File Report 2005-1451, http://pubs.usgs.gov/of/2005/1451/.

Beaulieu, E., Poppe, L.J., Paskevich, V.F., Doran, E.F., Chauveau, B.E., Crocker, J.M., Beaver, A.L., Schattgen, P.T., 2005, Sidescan-sonar imagery and surficial geologic interpretation of the sea floor off Bridgeport, Connecticut: U.S. Geological Survey Open-File Report 2005-1162, DVD-ROM, doi: 10.3133/ofr20051162.

Beavers, R.L., Pendleton, Elizabeth A., Thieler, E. Robert, Wiliams, S. Jeffress,, 2005, Applications of vulnerability to sea-level rise products in coastal national parks [abs.]: , Solutions to Coastal Disasters. Charleston, S.C., 8-11 May 2005.

Birchwood, R., Noeth, Sheila, Hooyman, Patrick, Winters, William J., Jones, Emrys,, 2005, Wellbore stability model for marine sediments containing gas hydrates [abs.]: , Proceedings, American Association for Drilling Engineers National Conference and Exhibition. Houston, Tex., 5-7 April 2005, Paper # AADE-05-NTCE-13.

Birchwood, R., Noeth, Sheila, Winters, William, and Jones, Emrys, 2005, Wellbore stability modeling in sediments containing gas hydrates [abs.]: , Gulf Rocks 2004, Rock Mechanics Across Borders and Disciplines. Houston, Tex., 6-10 June 2004.

Bossak, B.H., Morton, R.A., Sallenger, A.H., Jr., 2005, A GIS-based information system for predicting impacts from coastal storms -- the Coastal Impact Assessment Tool (CIAT), version 1.0, user's manual: U.S. Geological Survey Open-File Report 2005-1260, https://doi.org/10.3133/ofr20051260.

Boulon, R., Chiappone, M., Halley, R., Jaap, W.C., Keller, B., Kruczynski, B., Miller, M., Rogers, C., 2005, Atlantic Acropora status review document: Report to National Marine Fisheries Service, Southeast Regional Office , 152 p.

Bouma, A.H., Twichell, David C., Rozman, Daniel J., Rehmer, Donald E.,, 2005, Characteristics of fine-grained outer fan fringe turbidite systems, chapter 25, in Bouma, A.H., and Stone, C.G., eds., Fine-grained turbidite systems: American Association of Petroleum Geologists Memoir 72/SEPM Special Publication #68, 11 p.

Brame, A.B., Krebs, J.M., McIvor, C.C., 2005, Wetland habitat use by the nekton community at Weedon Island County Preserve and Feather Sound: summary of 2004 data: U.S. Geological Survey , St. Petersburg, FL, 27 p. http://dl.cr.usgs.gov/tampa/prod_search_tampa.aspx?prodid=21415.

Bratton, J.F., Corbett, D. Reide,, 2005, Recent advances in understanding of the role of fluid flow through continental margins in earth system processes [abs.]: , Earth System Processes 2 , Calgary, Alberta, Canada, 8-11 August 2005, paper #38-1. Calgary, Alberta, Canada, 8-11 August 2005.

Bratton, J.F., Cross, VeeAnn A., Foster, David S., Crusius, John F., List, Jeffrey H.,, 2005, Submarine hydrogeology of a glaciated coastline; Cape Cod National Seashore [abs.]: , New England Estuarine Research Society. Eastham, Mass., 28-30 April 2005.

Bratton, J., Crusius, John, Cross, VeeAnn A., Koopmans, Dirk J.,, 2005, Delineation of nearshore freshwater-saltwater relationships in submarine ground water using continuous resistivity profiling and piezometer transects in the Neuse River Estuary [abs.]: , Geological Society of America, Annual Meeting, Abstracts with Programs, Abstract # 211-13. Salt Lake City, Utah, 16-10 October 2005.

Brock, J.C., Thompson, P.R., Caesar, N., Nagle, D.B., Hickey, T.D., Hallock-Muller, P., 2005, USGS seeks Caribbean region applications of a novel Along Track Reef Imaging System [abstract]: Proceedings of the 32nd scientific meeting of the Association of Marine Laboratories of the Caribbean (AMLC)Curaçao, Dutch Caribbean, 13-17 June 2005.

Butman, B., 2005, What's going on down there? New views of the sea floor of Massachusetts Bay and the Stellwagen Bank National Marine Sanctuary [abs.]: , Cape Cod Museum of Natural History, Lecture for "Ocean Treasures" course.

Buynevich, I.V., Fitzgerald, Duncan M.,, 2005, Sedimentological signatures of riverine-dominated phases in estuarine and barrier evolution along an embayed coastline, in Fitzgerald, D.M., and Knight, J., eds., High resolution morphodynamics and sedimentary evolution of estuaries: Estuarine Morphodynamics, Special Volume, .

Caesar, N., Brock, J.C., Hallock-Muller, P., Hickey, T.D., Mann, D.M., Nagle, D.B., Thompson, P.R., 2005, Along-Track Reef Imaging System for efficient reef monitoring and ground-truthing [abstract]: Proceedings of the 32nd scientific meeting of the Association of Marine Laboratories of the Caribbean (AMLC)Curaçao, Dutch Caribbean, 13-17 June 2005.

Calderon, K., Dadisman, S.V., Kindinger, J.L., Flocks, J.G., Wiese, D.S., 2005, Archive of digital boomer seismic reflection data collected during USGS Cruise 94CCT02, south-central South Carolina coastal region, August 1994: U.S. Geological Survey Data Series 147, https://doi.org/10.3133/ds147.

Carbo, A., Cordoba, C., Davila, J. Martin, ten Brink, Uri S., Herranz, P., von Hillebrandt, C., Payero, J., Martin, A. Munoz, Pazos, A., Catalan, M., Granja, J.L., Gomez, M.,, 2005, Survey explores active tectonics in northeastern Caribbean: Eos, Transactions, American Geophysical Union, v. 86 no. 51.

Carnahan, L.A., Hoare, A.M., Hallock, P., Lidz, B.H., Reich, C.D., Shinn, E.A., Anonymous, 2005, Foraminiferal assemblages and geochemical properties of sediments in Biscayne Bay, Florida: Abstracts with Programs - Geological Society of America 37, 189 p.

Churchill, J.H., Pettigrew, Neal R., Signell, Richard P.,, 2005, Structure and variability of the Western Maine coastal current: Deep Sea Research II, v. 52.

Cochran-Marquez, S., 2005, Moloka'i Benthic Habitat Mapping: U.S. Geological Survey Open-File Report 2005-1070, http://pubs.usgs.gov/of/2005/1070/.

Cochrane, G., Conrad, J., Reid, J., Fangman, S., and Golden, N., 2005, Nearshore benthic habitat GIS for the Channel Islands National Marine Sanctuary and southern California state fisheries reserves volume II: U.S. Geological Survey Open-File Report 2005-1170, http://pubs.usgs.gov/of/2005/1170/.

Cohen, A.S., Palacios-Fest, M.R., McGill, J., Swarzenski, P.W., Verschuren, D., Sinyinza, R., Songori, T., Kakagozo, B., Syampila, M., O'Reilly, C.M., Alin, S.R., 2005, Paleolimnological investigations of anthropogenic environmental change in Lake Tanganyika: I. An introduction to the project: Journal of Paleolimnology, v. 34, pp. 1–18.

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Coté, J.M., Hotchkiss, Frances S., Martini, Marinna A., Denham, Charles R., Ramsey, Andrée L., and Ruane, Stephen, 2005, Acoustic doppler current profiler data processing system manual: U.S. Geological Survey Open-File Report 00-458, Version 3, doi: 10.3133/ofr00458.

Crane, M.P., Hearn, C., 2005, Proceedings of the workshop on remote sensing applications relevant to integrated science in Tampa Bay, February 7, 2005: U.S. Geological Survey , St. Petersburg, FL.

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Crusius, J., Bratton, J.F., Charette, M., 2005, Putting radon to work: Identifying coastal ground-water discharge sites: U.S. Geological Survey Open-File Report 2004-1381, 2 p., doi: 10.3133/ofr20041381.

Crusius, J., Bratton, John F., Koopmans, Dirk J., Spruill, Timothy B., Corbett, D. Reide,, 2005, Submarine groundwater discharge to the Neuse River Estuary (NC) constrained from continuous measurements of 222Rn [abs.]: , Estuarine Research Federation, 18th Biennial Meeting. Norfolk, Va., 16-21 October 2005.

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Dartnell, P., Cochrane, G., and Dunaway, M.E., 2005, Multibeam Bathymetry and Backscatter Data: Northeastern Channel Islands Region, Southern California: U.S. Geological Survey Open-File Report 2005-1153, http://pubs.usgs.gov/of/2005/1153/.

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Dohmen-Janssen, C.M., Hanes, D.M., 2005, Sheet flow and suspended sediment due to wave groups in a large wave flume: Continental Shelf Research, v. 25 no. 3, pp. 333–347, doi: 10.1016/j.csr.2004.10.009.

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Draut, A., and Rubin, D., 2005, Measurements of Wind, Aeolian Sand Transport, and Precipitation in the Colorado River Corridor, Grand Canyon, Arizona -- November 2003 to December 2004: U.S. Geological Survey Open-File Report 2005-1309, http://pubs.usgs.gov/of/2005/1309/.

Draut, A., et al.,, 2005, Sedimentology and stratigraphy of the Palisades, Lower Comanche, and Arroyo Grande areas of the Colorado River corridor, Grand Canyon, Arizona: U.S. Geological Survey Scientific Investigations Report 2005-5072, 68 p., http://pubs.usgs.gov/sir/2005/5072/.

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EERI Team, including K., Robert E., 2005, Preliminary observations on the Niigata Ken Chuetsu, Japan, Earthquake of October 23, 2004: EERI Special Earthquake Report—January 2005, Earthquake Engineering Research Institute, Oakland, Calif., 12 p., http://www.eeri.org/lfe/pdf/japan_niigata_eeri_preliminary_report.pdf.

Edgar, T., Yates, K.K., 2005, Gulf of Mexico Integrated Science - Tampa Bay Study; historical and prehistorical record of Tampa Bay environments: U.S. Geological Survey Open-File Report 2005-1016, 2 p., https://doi.org/10.3133/ofr20051016.

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Enright, T.J., Pegram, K.M.H., 2005, Ecosystems of South Florida: U.S. Geological Survey Open-File Report 2005-1021, https://doi.org/10.3133/ofr20051021.

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Farnsworth, K.L., and Warrick, Jonathan A., 2005, Sources of fine sediment to the southern California coast; computation of a "mud budget": Report submitted to the California Coastal Sediment Management Workgroup, http://dbw.ca.gov/csmw/csmwhome.htm.

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Fisher, M.A., 2005, Neotectonics of the Offshore Oak Ridge Fault near Ventura, Southern California: Bulletin of the Seismological Society of America, v. 95 no. 2, pp. 739–744, doi: 10.1785/0120040126.

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Foxgrover, A., and Jaffe, B., 2005, South San Francisco Bay 2004 topographic lidar survey: Data overview and preliminary quality assessment: U.S. Geological Survey Open-File Report 2005-1284, https://pubs.usgs.gov/of/2005/1284/.

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Garrison, V.H., Orazio, C., Alvarez, D., Aeby, G., Carroll, J., Taylor, M., 2005, Anthropogenic organic contaminants on coral reefs - global atmospheric deposition or local sources? U.S. Geological Survey Open-File Report 2005-1400, 24 p.

Garrison, V.H., Richardson, L.L., Smith, G.W., 2005, Disease on coral reefs - 2004 state of knowledge: Proceedings, second bilateral conference between Russia and the United States, Michigan State University, Shephardstown, West Virginia, 21-28 September 2003, pp. 152–165.

Garrison, V.H., Shinn, E.A., Miller, J.E., Carlo, M., Rodriguez, R.W., Koltes, K., 2005, Benthic cover on coral reefs of Isla del Culebra (Puerto Rico) 1991-1998 and a comparison of assessment techniques: U.S. Geological Survey Open-File Report 2005-1398, https://doi.org/10.3133/ofr20051398.

Gayes, P.T., Schwab, W. C., Eiser, W.C.,, 2005, An integrated approach to assessing natural and constructed beach systems; the South Carolina coast, U.S.A., in Brauun, P., ed., Appendix to Chapter 7, Port Engineering: 5th Edition, .

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Geist, E., 2005, Local tsunami hazards in the Pacific Northwest from Cascadia subduction zone earthquakes: In: Kayen, R. (Ed.). U.S. Geological Survey Professional Paper 1661-B(Earthquake Hazards of the Pacific Northwest Coastal and Marine Regions), 17 p., http://pubs.usgs.gov/pp/pp1661b/.

Geist, E.L., and Parsons, T., 2005, Triggering of Tsunamigenic Aftershocks from Large Strike-Slip Earthquakes: Analysis of the November 2000 New Ireland Earthquake Sequence: Geochemistry, Geophysics, Geosystems, v. 6 no. 10, doi: 10.1029/2005gc000935.

Geist, E.L., 2005, Rapid tsunami models and earthquake source parameters; far-field and local applications: ISET Journal of Earthquake Technology, v. 42, pp. 127–136.

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Geyer, W.R., Mullenbach, B.L., Sherwood, C.R., Signell, R.P., Ogston, A.S., Kineke, G.C., Puig, P., Traykovski, P., 2005, Dynamics of the Western Adriatic coastal current [abs.]: , EuroSTRATAFORM Final Meeting. Salamanca, Spain, October 2005.

Gibbons, H., Oates, J., Jaffe, B., 2005, USGS scientists study sediment deposited by 2004 Indian Ocean tsunami: Sound Waves: Coastal science and research news from across the USGS, , URL: http://soundwaves.usgs.gov/2005/02/.

Gibbs, A., Grossman, E., Logan, J., Cochran-Marquez, S., Storlazzi, C., Field, M., Paytan, A., and Street, J., 2005, Seafloor Habitat Mapping And Oceanographic Studies In The Kona Coast National Parks: Geological Society of America 2004 Annual Mtg. Abstract 45-7, URL: http://gsa.confex.com/gsa/2004AM/finalprogram/abstract_79346.htm.

Gibbs, A., Grossman, E., and Richmond, B., 2005, Summary and preliminary interpretations of U.S. Geological Survey cruise A202HW: Underwater video surveys collected off of Oahu, Molokai, and Maui, Hawaii June-July 2002: U.S. Geological Survey Open-File Report 2005-1244, http://pubs.usgs.gov/of/2005/1244/.

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Griffin, D.W., 2005, Clouds of desert dust and microbiology: a mechanism of global dispersion: Microbiology Today, v. 32, pp. 180–182.

Grossman, E.E., Hart, P., and Field, M.E., 2005, Evidence of recent sediment storage and transport from shallow seismic stratigraphy on the Cap de Creus shelf, Spain: EuroSTRATAFORM - Promess Joint Meeting, Salamanca, Spain, October 24-27, 2005.

Grossman, E., 2005, Deltaic Habitats in Puget Sound--Natural Versus Human-Related Change: U. S. Geological Survey Sound Waves, January 2005, http://soundwaves.usgs.gov/2005/01/fieldwork3.html/.

Gutierrez, B.T., Voulgaris, G., and Thieler, E. R., 2005, Exploring the persistence of sorted bedforms on the inner-shelf of Wrightsville Beach, North Carolina: Continental Shelf Research, v. 25 no. 1, doi: 10.1016/j.csr.2004.07.027.

Guy, K., 2005, Automated extraction of coastal dune high and dune low from high resolution lidar digital elevation models: U.S. Geological Survey Open-File Report 2005-1344, https://doi.org/10.3133/ofr20051344.

Hall, D.K., Williams, Richard S., and Casey, Kimberly A., 2005, Analysis of surface-melt dynamics on the Greenland Ice Sheet using MODIS data products; 2000-2005 [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement, Abstract #C23A-1141. San Francisco, 5-9 December 2005.

Halley, R., Smith, D., Hansen, M., 2005, Florida Bay surface salinities: U.S. Geological Survey Open-File Report 98-142, https://doi.org/10.3133/ofr98142.

Hansen, M., Crane, M., Hearn, C., Yates, K., 2005, Gulf of Mexico Integrated Science - Tampa Bay study; watershed and estuary mapping: U.S. Geological Survey Open-File Report 2005-1014, 2 p., https://doi.org/10.3133/ofr20051014.

Hapke, C., Gmirkin, R., and Richmond, B., 2005, Coastal Change Rates and Patterns: Kaloko-Honokohau National Historical Park, Hawai'i: U.S. Geological Survey Open-File Report 2005-1069, http://pubs.usgs.gov/of/2005/1069/.

Hapke, C., and Green, K., 2005, Decadal-scale analysis of coastal landslides along the Big Sur coast: Rates and processes: U.S. Geological Survey Open-File Report 2005-1434, http://pubs.usgs.gov/of/2005/1434/.

Hapke, C., and Green, K., 2005, Rates of landsliding and cliff retreat along the Big Sur coast, California-measuring a crucial baseline: U.S. Geological Survey Fact Sheet 2004-3099, http://pubs.usgs.gov/fs/2004/3099/.

Harris, C.K., Sherwood, C.R., Signell, R.P., Bever, A., 2005, Sediment resuspension in the Adriatic Sea; sensitivity of model calculations to sediment bed properties [abs.]: , EuroSTRATAFORM Final Meeting. Salamanca, Spain, October 2005.

Harris, M., Brock, J.C., Nayegandhi, A., Duffy, M., 2005, Extracting shorelines from NASA airborne topographic lidar-derived digital elevation models: U.S. Geological Survey Open-File Report 2005-1427, 32 p., https://doi.org/10.3133/ofr20051427.

Harris, M.S., Gayes, P.T., Kindinger, J.L., Flocks, J.G., Krantz, D.E., Donovan, P., 2005, Quaternary geomorphology and modern coastal development in response to an inherent geologic framework: an example from Charleston, South Carolina: Journal of Coastal Research, v. 21, pp. 49–64.

Hart, P.E., Hutchinson, D. R., and Lee, M., 2005, High-resolution multichannel seismic-reflection data acquired in the northern Gulf of Mexico, 2003: U.S. Geological Survey Open-File Report 2005-1411, http://pubs.usgs.gov/of/2005/1411/.

Hearn, C., 2005, Tampa Bay integrated coastal model user's manual: U.S. Geological Survey , St. Petersburg, FL.

Hein, J.R., Koschinsky, A., McIntyre, B.R., 2005, Mercury- and Silver-Rich Ferromanganese Oxides, Southern California Borderland: Deposit Model and Environmental Implications: Economic Geology, v. 100 no. 6, pp. 1151–1168, doi: 10.2113/gsecongeo.100.6.1151.

Hein, J.R., McIntyre, B.R., Piper, D.Z., 2005, Marine mineral resources of Pacific Islands - a review of the Exclusive Economic Zones of islands of U.S. affiliation, excluding the State of Hawaii: U.S. Geological Survey Circular 1286, 69 p., http://pubs.usgs.gov/circ/2005/1286/.

Helgerud, M.B., Waite, William F., Stern, L.A., Kirby, S.H.,, 2005, Effects of fracture and crack healing in sI methane and sII methane-ethane gas hydrate: Eos, Transactions, American Geophysical Union, Fall Meeting Supplement, Abstract #OS43A-0605, v. 86 no. 52.

Higgins, S.A., Jaffe, B. E., and Smith, R. E., 2005, Bathychronology: Reconstructing historical sedimentation from bathymetric data in a GIS: U.S. Geological Survey Open-File Report 2005-1273, http://pubs.usgs.gov/of/2005/1273/.

Himmelstoss, E.A., Thieler, E. R., Miller, Tara L., Martin, Daniel, Ergul, Ayhan, Das, Amar, Thompson, Michael,, 2005, The Digital Shoreline Analysis System (DSAS); an ARCGIS© extension for calculating historic shoreline change [abs.]: , Coastal GeoTools '05. Myrtle Beach, S.C., 7-10 March 2005.

Hu, C., Chen, Z., Clayton, T.D., Swarzenski, P., Brock, J.C., Muller-Karger, F.E., 2005, Erratum: Assessment of estuarine water-quality indicators using MODIS medium-resolution bands: Initial results from Tampa Bay, FL (Remote Sensing of Environment (2004) 93 (423-441): Remote Sensing of Environment, v. 94, pp. 425–427.

Hutchinson, D.R., Ruppel, C.D., Pohlman, J.W., Hart, P.E., Snyder, F., Dutta, N., Dugan, B., and Coffin, R.,, 2005, Geophysical and geochemical characterization of the hydrate stability zone in a region of active salt tectonics, Keathley Canyon, northern Gulf of Mexico (abs.): , 4th International Workshop of Methane Hydrate Research and Development. Victoria, BC, 9-11 May, 2005.

Hutchinson, D., et al.,, 2005, A Preliminary Assessment of Geologic Framework and Sediment Thickness Studies Relevant to Prospective US Submission on Extended Continental Shelf: U.S. Geological Survey Open-File Report 2004-1447, http://pubs.usgs.gov/of/2004/1447/.

Hutchinson, D.R., Sanders, R., Faust, T., 2005, Making USGS information effective in the electronic age: U.S. Geological Survey Open-File Report 2003-240, 66 p., doi: 10.3133/ofr03240.

Hutchinson, D.R., Childs, Jonathan R., Edgar, Terrence, Barth, Ginger, Hammar-Klose, Erika S., Dadisman, Shawn V., Rowland, Robert,, 2005, Geological and sediment thickness data sources from the U.S. continental margins [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement, Abstract #T13D-0501. San Francisco, 5-9 December 2005.

Hutchinson, D.R., Snyder, Fred, Hart, Patrick E., Ruppel, Carolyn D., Pohlman, John, Wood, Warren, Coffin, Richard B., Edwards, K. Michelle,, 2005, Geologic and site survey setting for JIP Gulf of Mexico gas hydrate drilling [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement, Abstract #OS31D-01, Invited Presentation. San Francisco, 5-9 December2005.

Jaffe, J.S., Franks, P.J.S., Zawada, D.G., 2005, Optical techniques for discovering the small-scale structure of the ocean: 3rd International Conference on Current Problems in Optics of Natural WatersSt. Petersburg, Russia, 12-16 September, 2005.

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Jones, K.W., Feng, Huan, Tmov, Stanmire, Winters, William J., Eaton, Michael, Mahajan, Devinder,, 2005, Characterization of methane hydrate host sediments using synchrotron-computed microtomography (CMT): Preprints, American Chemical Society National Meeting, .

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Katz, B.G., Raabe, E.A., 2005, Suwannee basin and estuary; an integrated watershed science program: U.S. Geological Survey Open-File Report 2005-1210, 19 p., https://doi.org/10.3133/ofr20051210.

Kayen, R., Carkin, B., Minasian, D., and Tinsley, J., 2005, Shear wave velocity of the ground near southern California TRINET sites using the spectral analysis of surface waves method (SASW) and parallel-arrayed harmonic-wave sources: U.S. Geological Survey Open-File Report 2005-1365, http://pubs.usgs.gov/of/2005/1365/.

Kayen, R., Thompson, E., Minasian, D., and Carkin, B., 2005, Shear-wave velocity of the ground near sixty California strong motion recording sites by the Spectral Analysis of Surface Waves (SASW) method and harmonic-wave sources: U.S. Geological Survey Open-File Report 2005-1366, http://pubs.usgs.gov/of/2005/1366/.

Kayen, R.E., 2005, The spectral analysis of surface waves measured at William Street Park, San Jose, California, using swept-sine harmonic waves, in Asten, Michael W., and Boore, David M., eds., Blind comparisons of shear-wave velocities at closely-spaced sites in San Jose, California; proceedings of a workshop held at the U.S. Geological Survey, Menlo Park, May 3, 2004: U.S. Geological Survey Open-File Report 2005-1169, http://pubs.usgs.gov/of/2005/1169/.

Kellogg, C., 2005, Coral microbial ecology: U.S. Geological Survey Fact Sheet 2005-3039, 4 p., http://pubs.usgs.gov/fs/2005/3039/.

Koenig, C.C., Shepard, Andrew N., Reed, John K., Coleman, Felicia C., Brooke, Sandra D., Brusher, John, Scanlon, Kathryn M.,, 2005, Habitat and fish population in the deep-sea Oculina coral ecosystem of the western Atlantic, in Barnes, P.W., and Thomas, J.P., eds., Benthic habitats and the effects of fishing: American Fisheries Society, Symposium 41, v. 41.

Kostylev, V.E., Todd, B.J., Longva, O., Valentine, Page, C.,, 2005, Characterization of benthic habitats on Georges Bank, in Barnes, P.W., and Thomas, J.P., eds., Benthic Habitats and the Effects of Fishing: American Fisheries Society Symposium-41, .

Krauss, K.W., Doyle, T.W., Twilley, R.R., Smith, T.J., III, Whelan, K.R.T., Sullivan, J.K., 2005, Woody debris in the mangrove forests of South Florida: Biotropica, v. 37, pp. 9–15.

Krebs, J.M., Brame, A.B., McIvor, C.C., 2005, Wetland habitat use by the nekton community at Mobbly Bayou County Preserve: summary of 2004 data: U.S. Geological Survey Open-File Report 2005-1175, 23 p.

Krebs, J.M., Brame, A.B., McIvor, C.C., 2005, Wetland habitat use by the nekton community at Terra Ceia state aquatic buffer preserve: summary of 2004 data: U.S. Geological Survey Open-File Report 2005-1448, 31 p.

Kroeger, K., Charette, M.A., Swarzenski, P.W., Crusius, John F., Bratton, John F.,, 2005, Contrasting nitrogen biogeochemistry and fluxes from a temperate and subtropical coastal aquifer [abs.]: , Estuarine Research Federation, 18th Biennial Meeting. Norfolk, Va., 16-21 October 2005.

Kuffner, I.B., 2005, Temporal variation in photosynthetic pigments and UV-absorbing compounds in shallow populations of two Hawaiian reef corals: Pacific Science, v. 59, pp. 561–580.

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Kulp, M., Penland, P. Shea, Williams, S. Jeffress, Jenkins, Chris, Flocks, J.G., Kindinger, Jack L.,, 2005, Geologic Framework, Evolution, and Sediment Resources for Restoration of the Louisiana Coastal Zone: Journal Coastal Research, 19 p., 12 figures, v. 44.

Kvenvolden, K.A., Rogers, B.W., 2005, Gaia's breath--global methane exhalations: Marine and Petroleum Geology, v. 22 no. 4, pp. 579–590, doi: 10.1016/j.marpetgeo.2004.08.004.

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Lee, H.J., 2005, Undersea landslides: extent and significance in the Pacific Ocean, an update: Natural Hazards and Earth Science Systems, v. 5 no. 6, pp. 877–892, doi: 10.5194/nhess-5-877-2005.

Lidz, B.H., 2005, Environmental quality and preservation; mapping benthic ecosystems and environments in the Florida Keys: U.S. Geological Survey Open-File Report 2005-1002, 6 p., https://doi.org/10.3133/ofr20051002.

Link, J., Almeida, F., Valentine, Page, C., Auster, P.J., Reid, R., Vitaliano, J.,, 2005, The effects of area closures on Georges Bank, in Barnes, P.W., and Thomas, J.P., eds., Benthic Habitats and the Effects of Fishing: American Fisheries Society Symposium 41, .

Lisle, J.T., 2005, Characterization of the native microbial communities in Floridan aquifer waters targeted for aquifer storage and recovery (ASR) applications, south-central Florida: U.S. Geological Survey Open-File Report 2005-1036, 30 p.

Lisle, J.T., 2005, Microbially induced changes in metal mobility and toxicity in groundwater - Florida Aquifer, south-central Florida: literature review: U.S. Geological Survey Open-File Report 2005-1432.

List, J.H.,, 2005, Sediment budget, chapter in: Encyclopedia of Coastal Science, Kluwer Academic Publishers, 24 p.

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Logan, J.B., Field, M. E., and Chavez, P. S., 2005, Bathymetry and selected views of the fringing coral reef, south Molokai, Hawaii: U.S. Geological Survey Scientific Investigations Map 2886, http://pubs.usgs.gov/sim/2005/2886/.

Mallinson, D., Riggs, Stan, Thieler, E. Robert, Culver, Stephen, Farrell, Kathleen, Foster, David S., Corbett, D. Reide, Horton, Benjamin, and Wehmiller, John F., 2005, Late Neogene and Quaternary evolution of the northern Albemarle Embayment (mid-Atlantic continental margin, USA): Marine Geology, v. 217 no. 1-2, doi: 10.1016/j.margeo.2005.02.030.

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McIvor, C.C., 2005, Gulf of Mexico integrated science - Tampa Bay study - characterization of tidal wetlands: U.S. Geological Survey Open-File Report 2005-1174, 2 p., https://doi.org/10.3133/ofr20051174.

McKinney, B.A., Lee, M.W., Agena, W.F., Poag, C.W., 2005, Early to Middle Jurassic salt in Baltimore Canyon trough: U.S. Geological Survey Open-File Report 2004-1435, CD-ROM, doi: 10.3133/ofr20041435.

McMullen, K.Y., Poppe, L.J., DiGiacomo-Cohen, M.L., Moser, M.S., Christman, E.B., 2005, Surficial geology of the sea floor in west-central Long Island Sound as shown by sidescan-sonar imagery: Northeastern Geology and Environmental Sciences, v. 27 no. 1.

McMullen, K.Y., Poppe, L.J., Paskevich, V.F., Doran, E.F., Moser, M.S., Christman, E.B., Beaver, A.L., 2005, Surficial geologic interpretation and sidescan sonar imagery of the sea floor in west-central Long Island Sound: U.S. Geological Survey Open-File Report 2005-1018, DVD-ROM, doi: 10.3133/ofr20051018.

Meckel, T., ten Brink, U.S., Williams, S.J., 2005, Estimates of historic, present, and future rates of surface displacement due to hydrodynamic autocompaction of Holocene sediments in the Louisiana delta plain [abs.]: , American Geophysical Union Joint Assembly, Subsidence of South-Central North America. New Orleans, La., 23-27 May 2005.

Meckel, T.A., ten Brink, Uri S., Williams, S.Jeffress,, 2005, Numerical constraints of current rates of subsidence due to compaction of shallow sediments in the Louisiana coastal plain [abs.]: , Eos, Transactions, American Geophysical Union.

Meckel, T.A., ten Brink, U.S., Williams, S.J., 2005, Calculations of current and future rates of surface elevation change due to compaction of Holocene sediments in the Louisiana Delta Plain [abs.]: , 2005 GCAGS Convention. New Orleans, La., 25-27 September 2005.

Meckel, T.A., Williams, S. Jeffress, ten Brink, Uri S.,, 2005, A Stochastic computational method for determining present rates and stratigraphic controls of shallow compaction in coastal deltaic environments [abs.]: , Eos, Transactions, American Geophysical Union, Fall Meeting Supplement, Abstract #G11A-1200. San Francisco, 5-9 December 2005.

Miller, T.L., Morton, R.A., Sallenger, A.H., 2005, The National Assessment of Shoreline Change; a GIS compilation of vector shorelines and associated shoreline change data for the U.S. southeast Atlantic coast: U.S. Geological Survey Open-File Report 2005-1326, doi: 10.3133/ofr20051326.

Miller, T.L., Morton, R.A., Sallenger, A.H., Jr., 2005, National assessment of shoreline change: a GIS compilation of vector shorelines and associated shoreline change data for the U.S. southeast Atlantic coast: U.S. Geological Survey Open-File Report 2005-1326, https://doi.org/10.3133/ofr20051326.

Morton, R.A., 2005, Mapping beaches and coastal terrain: In: Schwartz, M.L. (Ed.). Encyclopedia of coastal science, Springer, Dordrecht, pp. 618–623, URL: http://www.springerlink.com/content/978-1-4020-3880-8.

Morton, R.A., Bernier, J.C., Barras, J., Ferina, N.F., 2005, Historical subsidence and wetland loss in the Mississippi Delta Plain: Transactions - Gulf Coast Association of Geological Societies, v. 55, pp. 555–571.

Morton, R.A., Bernier, J.C., Barras, J.A., Ferina, N.F., 2005, Rapid subsidence and historical wetland loss in the Mississippi Delta plain; likely causes and future implications: U.S. Geological Survey Open-File Report 2005-1216, https://doi.org/10.3133/ofr20051216.

Morton, R.A., Miller, T., Moore, L., 2005, Historical shoreline changes along the US Gulf of Mexico: a summary of recent shoreline comparisons and analyses: Journal of Coastal Research, v. 21, pp. 704–709.

Morton, R.A., Miller, T.L., 2005, National assessment of shoreline change: Part 2, Historical shoreline changes and associated coastal land loss along the U.S. southeast Atlantic coast: U.S. Geological Survey Open-File Report 2005-1401, https://doi.org/10.3133/ofr20051401.

Morton, R.A., Peterson, R.L., 2005, Coastal classification atlas; Alabama-Mississippi coastal classification maps; Perdido Pass to Cat Island: U.S. Geological Survey Open-File Report 2005-1151, https://doi.org/10.3133/ofr20051151.

Morton, R.A., Peterson, R.L., 2005, Coastal classification atlas; southeast Texas coastal classification maps - Sabine Pass to the Colorado River: U.S. Geological Survey Open-File Report 2005-1370, https://doi.org/10.3133/ofr20051370.

Morton, R.A., Peterson, R.L., 2005, Coastal classification atlas; southeastern Louisiana coastal classification maps; Pass Abel to East Timbalier Island: U.S. Geological Survey Open-File Report 2005-1003, https://doi.org/10.3133/ofr20051003.

Morton, R.A., Peterson, R.L., Miller, T.L., 2005, Coastal classification atlas; western Louisiana coastal classification maps; lower Mud Lake entrance channel to Sabine Pass: U.S. Geological Survey Open-File Report 2005-1261, https://doi.org/10.3133/ofr20051261.

Murray, C.J., Chien, Y., Wilberg, P., Sherwood, C.R., Wheatcroft, R.A., 2005, Geostatistical mapping of sediment erodibility on the Palos Verdes (CA) shelf using multiple data sets [abs.]: , Eastern Pacific Oceanography Conference. Mt. Hood, Oreg., 27-20 September 2005.

Nayegandhi, A., Brock, J.C., Wright, C.W., 2005, Classifying vegetation using NASA's Experimental Advanced Airborne Research Lidar (EAARL) at Assateague Island National Seashore: Proceedings, American Society of Photogrammetry and Remote Sensing 2005 annual conference, Curran Associates, Inc., Baltimore, MD, March 7-11, 2005, Id 500001 [Cd-Rom] p.

Nielsen, S.G., Rehkamper, M., Porcelli, D., Andersson, P., Halliday, A.N., Swarzenski, P.W., Latkoczy, C., Gunther, D., 2005, Thallium isotope composition of the upper continental crust and rivers; An investigation of the continental sources of dissolved marine thallium: Geochimica et Cosmochimica Acta, v. 69, pp. 2007–2019.

Nilsen, E.B., and Delaney, M.L., 2005, Factors Influencing the biogeochemistry of sedimentary carbon and phosphorus in the Sacramento-San Joaquin Delta: Estuaries, v. 28 no. 5, pp. 653–663.

Normark, W. and M.G., M.,, 2005, Late Quaternary deposition in the inner basins of the California continental borderland-part A. Santa Monica Basin: U.S. Geological Survey Scientific Investigations Report 2004-5183, http://pubs.usgs.gov/sir/2004/5183/.

Nothdurft, L.D., Webb, G.E., Buster, N.A., Holmes, C.W., Sorauf, J.E., Kloprogge, J.T., 2005, Brucite microbialites in living coral skeletons: Indicators of extreme microenvironments in shallow-marine settings: Geology, v. 33, pp. 169–172.

Orange, D., García-García, A., Lorenson, T.D., Nittrouer, C., Milligan, T., Miserocchi, S., Langone, L., Correggiari, A., and Trincardi, F., 2005, Shallow gas and flood deposition on the Po Delta; Mediterranean prodelta systems: Marine Geology, v. 222-223, pp. 159–177, doi: 10.1016/j.margeo.2005.06.040.

Osterman, L.E., Poore, R.Z., Swarzenski, P.W., Hollander, D.J., 2005, A several century record of low oxygen conditions from a sediment core on the Louisiana continental shelf [abstract]: Abstracts with Programs - Geological Society of America, v. 37, 11 p., URL: http://gsa.confex.com/gsa/2005SE/finalprogram/abstract_82453.htm.

Osterman, L.E., Poore, R.Z., Swarzenski, P.W., Turner, R.E., 2005, Reconstructing a 180 yr record of natural and anthropogenic induced low-oxygen conditions from Louisiana continental shelf sediments: Geology, v. 33 no. 4, pp. 329–332, doi: 10.1130/G21341.1.

Palandri, J.L., Rosenbauer, Robert J., and Kharaka, Y.K., 2005, Ferric iron in sediments as a novel CO2 mineral trap - CO2-SO2 reaction with hematite: Applied Geochemistry, v. 20, pp. 2038–2048.

Parsons, T., 2005, A hypothesis for delayed dynamic earthquake triggering: Geophysical Research Letters, v. 32 no. 4, doi: 10.1029/2004gl021811.

Parsons, T., 2005, Significance of stress transfer in time-dependent earthquake probability calculations: Journal of Geophysical Research, v. 110 no. B5, doi: 10.1029/2004jb003190.

Parsons, T., Bruns, T.R., and Sliter, R., 2005, Structure and mechanics of the San Andreas-San Gregorio fault junction, San Francisco, California: Geochemistry, Geophysics, Geosystems (G3), v. 6 no. 1, doi: 10.1029/2004GC000838.

Parsons, T., Blakely, R.J., Brocher, T.M., Christensen, N.I., Fisher, M.A., Flueh, E., Kilbride, F., Luetgert, J.H., Miller, K., ten Brink, U.S., Trehu, A.M., Wells, R.E., 2005, Crustal structure of the Cascadia fore arc of Washington, in Kayen, Robert, ed., Earthquake hazards of the Pacific Northwest costal and marine regions: U.S. Geological Survey Professional Paper 1661-D, doi: 10.3133/pp1661D.

Parsons, et. al., 2005, Crustal Structure of the Cascadia Fore Arc of Washington, in Kayen, R., ed., Earthquake hazards of the Pacific Northwest costal and marine regions: U.S. Geological Survey Professional Paper 1661-D, http://pubs.usgs.gov/pp/pp1661d/.

Paull, C.K., Ussler, W., Lorenson, T.D., Winters, William J., Dougherty, Jennifer A.,, 2005, Geochemical constraints on the distribution of gas hydrates in the Gulf of Mexico: Geo-Marine Letters, 8 p., doi: 10.1007/s00367-005-0001-3.

Paull, C.K., Ussler, W., Lorenson, T., Winters, W., Dougherty, J., 2005, Geochemical constraints on the distribution of gas hydrates in the Gulf of Mexico: Geo-Marine Letters, v. 25 no. 5, pp. 273–280, doi: 10.1007/s00367-005-0001-3.

Paull, C.K., Ussler, W.I., Keaten, R., Holbrook, W.S., Hill, T.,, M., J., Halflidison, H., Johnson, J., Winter, W.J., Lorenson, T.D., Aiello, I., 2005, Assessing methane release from the colossal Storegga submarine landslide: , American Geophysical Union. San Francisco, 11-15 December 2005.

Pendleton, E.A., FitzGerald, D.M., 2005, Comparison of the hydrodynamic character of three tidal inlet systems, chapter 5 in FitzGerald, D.M., and Knight, J., eds., High resolution morphodynamics and sedimentary evolution of estuaries: , Springer. pp. 83–100.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2005, Coastal vulnerability assessment of Cape Hatteras National Seashore (CAHA) to sea-level rise: U.S. Geological Survey Open-File Report 2004-1064, Web Only, doi: 10.3133/ofr20041064.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2005, Coastal vulnerability assessment of Channel Islands National Park (CHIS) to sea-level rise: U.S. Geological Survey Open-File Report 2005-1057, Web Only, doi: 10.3133/ofr20051057.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2005, Coastal vulnerability assessment of Dry Tortugas National Park (DRTO) to sea-level rise: U.S. Geological Survey Open-File Report 2004-1416, doi: 10.3133/ofr20041416.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2005, Coastal vulnerability assessment of Gateway National Recreation Area (GATE) to sea-level rise: U.S. Geological Survey Open-File Report 2004-1257, Web Only, doi: 10.3133/ofr20041257.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2005, Coastal vulnerability assessment of Golden Gate National Recreation Area to sea-level rise: U.S. Geological Survey Open-File Report 2005-1058, Web Only, doi: 10.3133/ofr20051058.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2005, Coastal vulnerability assessment of National Park of American Samoa (NPSA) to sea-level rise: U.S. Geological Survey Open-File Report 2005-1055, Web Only, doi: 10.3133/ofr20051055.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2005, Coastal vulnerability assessment of Virgin Islands National Park (VIIS) to sea-level rise: U.S. Geological Survey Open-File Report 2004-1398, doi: 10.3133/ofr20041398.

Pendleton, E.A., Thieler, E.R., Williams, S.J., 2005, Coastal vulnerability assessment of War in the Pacific National Historical Park (WAPA) to sea-level rise: U.S. Geological Survey Open-File Report 2005-1056, Web Only, doi: 10.3133/ofr20051056.

Pendleton, E.A., Thieler, E.R., Williams, S.J., Beavers, R.L., 2005, Coastal vulnerability assessment of Padre Island National Seashore (PAIS) to sea-level rise: U.S. Geological Survey Open-File Report 2004-1090, Web Only, doi: 10.3133/ofr20041090.

Pendleton, E.A., Thieler, E. Robert, Williams, S. Jeffress, Beavers, Rebecca L.,, 2005, Assessing potential effects of future sea-level rise and coastal change on NPS Resources [abs.]: , George Wright Society Conference 2005; People, Places, and Parks. Philadelphia, 14-18 March 2005.

Perales, H., Voulgaris, G., Sanay, R., Warner, J.C., 2005, The influence of channel depth and bifurcation of estuarine residual circulation [abs.]: , 9th International Conference on Estuarine and Coastal Modeling. Charleston, S.C., 31 October- 2 November 2005.

Pettigrew, N.R., Churchill, James H., Lanzen, C.D., Mangum, L.J., Signell, Richard P., Thomas, A.C., Townsend, D.W., Wallinga, J.P., Xue, H.,, 2005, The kinematic and hydrographic structure of the Gulf of Maine coastal current: Deep Sea Research II, v. 52.

Poag, C.W.,, 2005, A Chesapeake chronicle; discovering a buried impact crater [abs.]: , American Association for the Advancement of Science, Annual Meeting. Washington, D.C., 17-21 February 2005.

Poag, C.W., 2005, The marine sedimentary record of impact paleoenvironmental effects; a field study at Chesapeake Bay [abs.]: , SEPM Research Conference. Springfield, Mo., 21-22 May 2005.

Poag, C.W., 2005, Eastern rim of the Chesapeake Bay impact crater; morphology, stratigraphy, and structure in Kenkmann, T., Horz, F., and Deutsch, A., eds., 2005, Large Meteorite Impacts III: , Geological Society of American, Special Paper 384. doi: 10.1130/0-8137-2384-1.117.

Polgári, M., Szabó, Z., Szabó-Drubina, M., Hein, J.R., Yeh, H.-W., 2005, A porous silica rock (“tripoli”) in the footwall of the Jurassic Úrkút manganese deposit, Hungary: Composition, and origin through carbonate dissolution: Sedimentary Geology, v. 177 no. 1–2, pp. 87–96, doi: 10.1016/j.sedgeo.2005.02.002.

Poore, R.Z., Pavich, M.J., Grissino-Mayer, H.D., 2005, Record of the North American southwest monsoon from Gulf of Mexico sediment cores: Geology, v. 33, pp. 209–212.

Poppe, L.J., Williams, S.J., and Paskevich, V.F., eds., 2005, U.S. Geological Survey east-coast sediment analysis; procedures, database, and GIS data: U.S. Geological Survey Open-File Report 2005-1001, DVD-ROM, supercedes OFR 00-358, URL: http://pubs.usgs.gov/of/2005/1001/.

Poppe, L.J., McMullen, K.Y., Williams, S.J., Paskevich, V.F., 2005, USGS east-coast sediment analysis: Procedures, database, and GIS data (ver. 3.0, November 2014): U.S. Geological Survey Open-File Report 2005-1001, v. 3.0, doi: 10.3133/ofr20051001.

Poppe, L.J., Doran, E.F., Moser, M.S., Forfinski, N.A., Stewart, H.F., Gardner, U.L, Keene, J.A., Christmas, E.B., Ackerman, Seth D.,, 2005, Distribution, character, and importance of sedimentary furrows in south-central Long Island Sound [abs.]: , Eos, Transactions, American Geophysical Union Joint Assembly, Abstract #OS23B-07. New Orleans, La., 23-27 May 2005.

Poppe, L.J., Eliason, A.H.,, 2005, Visual Basic software for processing sediment grain-size data [abs.]: , Geological Society of America, Abstracts with Programs. Salt Lake City, 16-19 October 2005.

Poppe, L.J., Foster, David S., Danforth, William W., Butman, Bradford, Blackwood, Dann S., Masterson, J.P.,, 2005, Character and distribution of exposed glaciolacustrine sediments off outer Cape Cod, Massachusetts [abs.]: , Geological Society of America, Northeast Section, Abstracts with Programs. Saratoga, New York, 14-16 March 2005.

Priscu, J.C., Adams, E.E., Paerl, H.W., Fritsen, C.H., Dore, J.E., Lisle, J.T., Wolf, C.F., Mikucki, J.A., 2005, Perennial Antarctic lake ice; a refuge for cyanobacteria in an extreme environment: In: Castello, J.D., Rogers, S.O. (Eds.). Life in ancient ice, Princeton University Press, Princeton, pp. 22–49.

Raabe, E., Katz, B.G., 2005, Suwanee River basin and estuary initiative: executive summary: U.S. Geological Survey Open-File Report 2004-1198, https://doi.org/10.3133/ofr20041198.

Raabe, E.A., Gauron, L.C., 2005, Florida salt marsh vole habitat: Lower Suwannee National Wildlife Refuge: U.S. Geological Survey Open-File Report 2005-1417, https://doi.org/10.3133/ofr20051417.

Reed, J.K., Shepard, Andrew N., Koenig, Christopher C., Scanlon, Kathryn M., and Gilmore, R. Grant, Jr., 2005, Mapping, habitat characterization, and fish surveys of the deep-water Oculina coral reef Marine Protected Area: a review of historical and current research, in Freiwald, A. and J.M. Roberts, eds., Cold-water Corals and Ecosystems: Berlin Heidelberg, Springer-Verlag, , doi: 10.1007/3-540-27673-4_22.

Reid, J.M., Reid, J.A., Jenkins, C.J., Hastings, M.E., Williams, S.J., and Poppe, L.J, 2005, usSEABED: Atlantic coast offshore surficial sediment data release: U.S. Geological Survey Data Series 118, http://pubs.usgs.gov/ds/2005/118/.

Reid, J.M., Reid, J.A., Jenkins, C.J., Hastings, M.E., Williams, S.J., Poppe, L.J., 2005, usSEABED; Atlantic coast offshore surficial sediment data release: U.S. Geological Survey Data Series 118, Version 1.0, CD-ROM, doi: 10.3133/ds118.

Richmond, B., and Gibbons, Helen, 2005, Assessing Tsunami Impacts in the Republic of Maldives: U. S. Geological Survey Sound Waves, April, 2005, http://soundwaves.er.usgs.gov/2005/04/fieldwork3.html.

Robbins, L.L., 2005, Major coastal and tidal ecosystems: In: Cilek, V., Smith, R.H. (Eds.). Encyclopedia of natural resources policy and management, Earth system: History and natural variability, v. 7. Evolution and function of Earth's biotomes: Aquatic systems: Encyclopedia of life support systems 7, Eolss Publishers, Oxford, UK, pp. 213–233, URL: http://greenplanet.eolss.net/EolssLogn/ViewChapter.aspx?CategoryId=12.

Robbins, L.L., Oaksford, E., 2005, Science within the U.S. Geological Survey Florida integrated science center (FISC): applications, integration, and new opportunities: U.S. Geological Survey Open-File Report 2005-1364, iv, 26 p., https://doi.org/10.3133/ofr20051364.

Robertson, G.L., Noble, Marlene A., Xu, Jingping, Rosenfeld, L.K., and McGee, C.D., 2005, Temporal and spatial patterns for surf zone bacteria before and after disinfection of the Orange County Sanitation District Effluent: Proceedings, MTS/IEEE Oceans 2005, 050214-16.

Rogers, C.S., 2005, Will the major reef-building species Acropora palmata (elkhorn coral) recover in the US and British Virgin Islands? Proceedings of the Annual Gulf and Caribbean Fisheries Institute Meeting, University of Miami, British Virgin Islands, pp. 439–452.

Rogers, C.S., 2005, Recovery and loss of reef-building corals in national parks in Florida and the Caribbean: U.S. Geological Survey , St. Johns, U.S.V.I.

Rogers, C.S., Sutherland, K.P., Porter, J.W., 2005, Has white pox disease been affecting Acropora palmata for over 30 years? Coral Reefs, v. 24, pp. 194–194.

Romero, L.M., Smith, T.J., III, Fourqurean, J.W., 2005, Changes in mass and nutrient content of wood during decomposition in a south Florida mangrove forest: Journal of Ecology, v. 93, pp. 618–631.

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Rubin, D., and Carter, C., 2005, Bedforms 4.0: MATLAB code for simulating bedforms and cross-bedding: U.S. Geological Survey Open-File Report 2005-1272, http://pubs.usgs.gov/of/2005/1272/.

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Yates, K.K., 2005, Gulf of Mexico Integrated Science - Tampa Bay Study; examining the impact of urbanization on seafloor habitats: U.S. Geological Survey Open-File Report 2005-1017, 2 p., https://doi.org/10.3133/ofr20051017.

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