Benthic Biological Interpretation for California Seafloor Mapping Project

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Metadata:

Identification_Information:
Citation:
Citation_Information:
Originator: Mary Yoklavich
Originator: Lisa Krigsman
Publication_Date: 2012
Title:
Benthic Biological Interpretation for California Seafloor Mapping Project
Geospatial_Data_Presentation_Form: comma-delimited text, and point shapefile
Series_Information:
Series_Name: Data Series
Issue_Identification: DS 781
Publication_Information:
Publication_Place: Reston, VA
Publisher: U.S. Geological Survey
Online_Linkage: https://doi.org/10.3133/ds781
Larger_Work_Citation:
Citation_Information:
Originator: Nadine E. Golden
Publication_Date: 2013
Title: California State Waters Map Series Data Catalog
Series_Information:
Series_Name: Data Series
Issue_Identification: DS 781
Publication_Information:
Publication_Place: Reston, VA
Publisher: U.S. Geological Survey
Online_Linkage: https://doi.org/10.3133/ds781
Description:
Abstract:
This part of DS 781 presents benthic biological observations of the California coast in support of the California Seafloor Mapping Project. A shapefile and corresponding comma-delimited text file are included in "Benthic_Biological_Interpretation.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html.
Purpose:
These data are intended for science researchers, students, policy makers, and the general public. This information is not intended for navigational purposes.The data can be used with geographic information systems (GIS) software to display geologic and oceanographic information.
Supplemental_Information:
These data were produced by Mary Yoklavich and Lisa Krigsman of the NOAA National Marine Fisheries Service, Southwest Fisheries Science Center as part of their Final Report to the State Coastal Conservancy under grant agreement no. 11-002. The data are being hosted here under a partnership agreement with the USGS California State Waters Mapping Program. Any use of trade, product, or firm names is for descriptive purposes only and does not imply endorsement by the U.S. Government.
Although this Federal Geographic Data Committee-compliant metadata file is intended to document the data set in nonproprietary form, as well as in Esri format, this metadata file may include some Esri-specific terminology.
Time_Period_of_Content:
Time_Period_Information:
Range_of_Dates/Times:
Beginning_Date: 2007
Ending_Date: 2012
Currentness_Reference: ground condition
Status:
Progress: Complete
Maintenance_and_Update_Frequency: None planned
Spatial_Domain:
Bounding_Coordinates:
West_Bounding_Coordinate: -124.530459
East_Bounding_Coordinate: -118.277097
North_Bounding_Coordinate: 40.538886
South_Bounding_Coordinate: 33.280913
Keywords:
Theme:
Theme_Keyword_Thesaurus: USGS Metadata Identifier
Theme_Keyword: USGS:5ee26e90-0f79-4837-83cc-3dc167942f1a
Theme:
Theme_Keyword_Thesaurus: Global Change Master Directory (GCMD)
Theme_Keyword: Marine Habitat
Theme:
Theme_Keyword_Thesaurus: ISO 19115 Topic Category
Theme_Keyword: biota
Theme_Keyword: geoscientificInformation
Theme_Keyword: oceans
Theme:
Theme_Keyword_Thesaurus: Marine Realm Information Bank (MRIB)
Theme_Keyword: video observation
Theme_Keyword: photographic sampling
Theme_Keyword: seabed
Theme:
Theme_Keyword_Thesaurus: USGS Thesaurus
Theme_Keyword: ecosystems
Theme_Keyword: videos
Theme_Keyword: underwater photography
Theme_Keyword: sea-floor characteristics
Theme:
Theme_Keyword_Thesaurus: None
Theme_Keyword: U.S. Geological Survey
Theme_Keyword: USGS
Theme_Keyword: Coastal and Marine Hazards and Resources Program
Theme_Keyword: CMHRP
Theme_Keyword: Pacific Coastal and Marine Science Center
Theme_Keyword: PCMSC
Theme_Keyword: benthic habitat
Theme_Keyword: fisheries
Theme_Keyword: video sled observations
Place:
Place_Keyword_Thesaurus: Geographic Names Information System (GNIS)
Place_Keyword: State of California
Place_Keyword: Pacific Ocean
Access_Constraints: None
Use_Constraints:
U.S. Government-collected or produced data and information are in the public domain and are freely redistributable with proper metadata and source attribution. Please recognize and acknowledge the NOAA National Marine Fisheries Service, Southwest Fisheries Science Center as the originator(s) of the dataset and in products derived from these data.
Point_of_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization:
U.S. Geological Survey, Pacific Coastal and Marine Science Center
Contact_Person: PCMSC Science Data Coordinator
Contact_Address:
Address_Type: mailing and physical
Address: 2885 Mission Street
City: Santa Cruz
State_or_Province: CA
Postal_Code: 95060
Contact_Voice_Telephone: 831-427-4747
Contact_Electronic_Mail_Address: pcmsc_data@usgs.gov
Browse_Graphic:
Browse_Graphic_File_Name: Browse_Graphic_File_Description: Map of benthic observation sites on the California coast.
Browse_Graphic_File_Type: JPEG
Native_Data_Set_Environment:
this information was not included in the original metadata information from the authors
Data_Quality_Information:
Attribute_Accuracy:
Attribute_Accuracy_Report:
this information was not included in the original metadata information from the authors
Logical_Consistency_Report:
this information was not included in the original metadata information from the authors
Completeness_Report:
this information was not included in the original metadata information from the authors
Positional_Accuracy:
Horizontal_Positional_Accuracy:
Horizontal_Positional_Accuracy_Report:
this information was not included in the original metadata information from the authors
Vertical_Positional_Accuracy:
Vertical_Positional_Accuracy_Report:
not applicable for this dataset as no vertical data are included
Lineage:
Process_Step:
Process_Description:
Visual surveys of the seafloor were conducted during 2007-2012 using a towed camera sled to groundtruth maps produced during the CA Seafloor Mapping Project. The camera sled (approximately 1 m x 1 m x 2 m in size) was equipped with an altimeter and a pair of scaling lasers set 15 cm apart. The sled had multiple digital video cameras and a digital still camera. The camera sled was towed above the seafloor at a speed of approximately one knot along transects roughly one nautical mile in length. A biologist (Lisa Krigsman) annotated video footage at sea from some (but not all) of these ocean cruises, assisting the staff from USGS to ground-truth seafloor maps along the California coast.
The remainder of the video analysis was performed in the laboratory. Observations were made during 10-second intervals at the top of every minute. During the video review process, benthic macro-organisms were identified to the lowest possible taxa. Components of benthic habitats, including primary (greater than 50 percent coverage within the viewed area during the 10-second sample) and secondary (greater than 20 percent coverage) substratum types (for example, rock, sand, etc., based on Tissot and others, 2006), biotic coverage, and biotic-complexity (organisms with complex structure, height greater than a meter, or in high numbers), also were evaluated and recorded in each 10-second interval. Data acquired directly from the cruises were used to populate the fields for abiotic complexity based on small-scale variations in height of the seafloor surface and abiotic slope (measured as low, medium, or high degree of complexity). Still photographs taken along each camera sled line also were used to help identify the benthic macro-organisms.
Observations were recorded into a spreadsheet using the video program MediaMapper (Red Hen Systems, Inc.), and held in digital data files. Data were recorded on cruise name, time, latitude, longitude, and camera-line number, in addition to the variables mentioned above (such as primary and secondary habitat, abiotic slope, abiotic complexity, biotic coverage, biotic complexity, and associated benthic macro-organisms).
Reference Cited:
Tissot, B.N., Yoklavich, M.M., Love, M.S., York, K., and Amend, M., 2006, Benthic invertebrates that form habitat on deep banks off southern California, with special reference to deep sea coral: Fishery Bulletin, v. 104, p. 167–181.
Process_Date: 2012
Spatial_Data_Organization_Information:
Direct_Spatial_Reference_Method: point
Point_and_Vector_Object_Information:
SDTS_Terms_Description:
SDTS_Point_and_Vector_Object_Type: point
Point_and_Vector_Object_Count: 6677
Spatial_Reference_Information:
Horizontal_Coordinate_System_Definition:
Geographic:
Latitude_Resolution: 0.000001
Longitude_Resolution: 0.000001
Geographic_Coordinate_Units: decimal degrees
Geodetic_Model:
Horizontal_Datum_Name: D_WGS_1984
Ellipsoid_Name: WGS_1984
Semi-major_Axis: 6378137.000000
Denominator_of_Flattening_Ratio: 298.257224
Entity_and_Attribute_Information:
Detailed_Description:
Entity_Type:
Entity_Type_Label: Benthic_Biological_Interpretation
Entity_Type_Definition:
shapefile and comma-delimited text files of benthic observations
Entity_Type_Definition_Source: NOAA NMFS
Attribute:
Attribute_Label: Cruise Name
Attribute_Definition:
USGS Field Activity Number (aka cruise ID); some cruise IDs are appended by a Tape number (for example Tape1v).
Attribute_Definition_Source: U.S. Geological Survey
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: C0212SC
Enumerated_Domain_Value_Definition:
USGS Field Activity C0212SC. More information may be found at https://cmgds.marine.usgs.gov/fan_info.php?fan=C0212SC
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: C210NC
Enumerated_Domain_Value_Definition:
USGS Field Activity C210NC. More information may be found at https://cmgds.marine.usgs.gov/fan_info.php?fan=C210NC
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: F307NC
Enumerated_Domain_Value_Definition:
USGS Field Activity F307NC. More information may be found at https://cmgds.marine.usgs.gov/fan_info.php?fan=F307NC
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: SW109SC
Enumerated_Domain_Value_Definition:
USGS Field Activity SW109SC. More information may be found at https://cmgds.marine.usgs.gov/fan_info.php?fan=SW109SC
Enumerated_Domain_Value_Definition_Source: USGS
Attribute:
Attribute_Label: Cruise Date
Attribute_Definition: date video footage was collected in M/D/YYYY format
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 9/27/2007
Range_Domain_Maximum: 8/20/2012
Attribute:
Attribute_Label: Time
Attribute_Definition:
time of day video footage was collected in 24-hour format (HH:MM:SS)
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 00:00:02
Range_Domain_Maximum: 23:59:33
Attribute:
Attribute_Label: Longitude
Attribute_Definition:
longitude, in decimal degrees, where video footage was collected
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: -124.530459
Range_Domain_Maximum: -118.277097
Attribute:
Attribute_Label: Latitude
Attribute_Definition: latitude, in decimal degrees, where video footage was collected
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 33.280913
Range_Domain_Maximum: 40.533386
Attribute:
Attribute_Label: LogEntry
Attribute_Definition: Unique number given by the observer.
Attribute_Definition_Source: producer
Attribute_Domain_Values:
Unrepresentable_Domain: Unique number given by the observer during video analysis
Attribute:
Attribute_Label: Primary Habitat
Attribute_Definition:
Primary substrate constitutes greater than fifty percent of the seafloor during an observation. The values are based on the Wentworth scale except that granule and pebble sizes have been grouped together into a class called "gravel," and clay and silt sizes have been grouped together into a class called "mud."
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Rock
Enumerated_Domain_Value_Definition: Exposed bedrock
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Boulder
Enumerated_Domain_Value_Definition: 25.5 cm or greater
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Cobble
Enumerated_Domain_Value_Definition: Between 25.5 cm and 6.5 cm
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Gravel
Enumerated_Domain_Value_Definition: Between 6.5 and .2 cm
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Sand
Enumerated_Domain_Value_Definition: Between .2 cm and .00625 cm
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Mud
Enumerated_Domain_Value_Definition: .00625 cm or smaller
Enumerated_Domain_Value_Definition_Source: USGS
Attribute:
Attribute_Label: Secondary Habitat
Attribute_Definition:
Secondary substrate constitutes greater than twenty percent of the seafloor during an observation. The values are based on the Wentworth scale except that granule and pebble sizes have been grouped together into a class called "gravel," and clay and silt sizes have been grouped together into a class called "mud."
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Rock
Enumerated_Domain_Value_Definition: Exposed bedrock
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Boulder
Enumerated_Domain_Value_Definition: 25.5 cm or greater
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Cobble
Enumerated_Domain_Value_Definition: Between 25.5 cm and 6.5 cm
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Gravel
Enumerated_Domain_Value_Definition: Between 6.5 and .2 cm
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Sand
Enumerated_Domain_Value_Definition: Between .2 cm and .00625 cm
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Mud
Enumerated_Domain_Value_Definition: .00625 cm or smaller
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Shell
Enumerated_Domain_Value_Definition: shell or shell fragments
Enumerated_Domain_Value_Definition_Source: producer
Attribute:
Attribute_Label: Slope
Attribute_Definition:
Slope of seafloor observed during analysis, based on Tissot and others (2006).
Attribute_Definition_Source: producer
Attribute_Domain_Values:
Unrepresentable_Domain: Observed slope is defined as low, moderate, or high.
Attribute:
Attribute_Label: Abiotic complexity
Attribute_Definition:
Abiotic complexity observed during analysis, based on Tissot and others (2006).
Attribute_Definition_Source: producer
Attribute_Domain_Values:
Unrepresentable_Domain: Abiotic complexity is defined as low, moderate, or high.
Attribute:
Attribute_Label: Biotic coverage
Attribute_Definition:
Biotic coverage observed during analysis, based on Tissot and others (2006).
Attribute_Definition_Source: producer
Attribute_Domain_Values:
Unrepresentable_Domain: Biotic coverage is defined as low, moderate, or high.
Attribute:
Attribute_Label: Biotic complexity
Attribute_Definition:
Biotic complexity observed during analysis, based on Tissot and others (2006).
Attribute_Definition_Source: producer
Attribute_Domain_Values:
Unrepresentable_Domain: Biotic complexity is defined as low, moderate, or high.
Attribute:
Attribute_Label: Presence or absence of biota
Attribute_Definition:
Columns 13 to 76 indicate whether the biota are present (1) or absent (0) during the video footage observation period.
Attribute_Definition_Source: producer
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value:
List of benthic biota Algae Agg anemone Sol anemone Tube anemone Bat star Bivalve Branchiopod Blood star Brittle in Brittle on Bryozoan Branching bryozoan Crab Cancer crab Hermit crab Crinoid Cup coral Drift weed Chond Egg Case Mollusc Egg Case Squid Eggs Eelpout Encrusting Fish Flatfish Fleshy sea pen Frilly cucumber Gastropod Goby Gorgonian Greenling Grey Puffball Hydrocoral Hydroid Kelp Lingcod Mediaster Metridium Octopus Orange Puffball Pin Cushion Pink Pisaster Prostrate Gorg Rainbow Star Rockfish Sand Star Sculpin Sea Cucumber Sea Hare Sea Pen Sea Slug Sea Star Sea Whip Shrimp Skate 3D Sponge Basket Star Leather Star Seabastomus Sun Star Tubeworm Tunicate Urchin Zoanthid
Enumerated_Domain_Value_Definition: presence (1) or absence (0) of the biota
Enumerated_Domain_Value_Definition_Source: USGS
Overview_Description:
Entity_and_Attribute_Overview: The first line of the csv file is a header line.
Entity_and_Attribute_Detail_Citation: U.S. Geological Survey
Distribution_Information:
Distributor:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey - ScienceBase
Contact_Address:
Address_Type: mailing and physical
Address: Denver Federal Center, Building 810, Mail Stop 302
City: Denver
State_or_Province: CO
Postal_Code: 80225
Contact_Voice_Telephone: 1-888-275-8747
Contact_Electronic_Mail_Address: sciencebase@usgs.gov
Resource_Description: shapefile and comma-delimited file
Distribution_Liability:
Unless otherwise stated, all data, metadata and related materials are considered to satisfy the quality standards relative to the purpose for which the data were collected. Although these data and associated metadata have been reviewed for accuracy and completeness and approved for release by the U.S. Geological Survey (USGS), no warranty expressed or implied is made regarding the display or utility of the data on any other system or for general or scientific purposes, nor shall the act of distribution constitute any such warranty.
Standard_Order_Process:
Digital_Form:
Digital_Transfer_Information:
Format_Name: comma-delimited text, shapefile
Format_Version_Number: ArcGIS 10.1.2
Format_Information_Content: shapefile and comma-delimited file
File_Decompression_Technique: Winzip
Transfer_Size: 1.4
Digital_Transfer_Option:
Online_Option:
Computer_Contact_Information: Access_Instructions:
Data can be downloaded using the Network_Resource_Name links. The first link is a direct link to download the zipped file of data and metadata. The second link points to a landing page with metadata and data. The third link points to the landing page for the entire data release.
Fees: None.
Technical_Prerequisites: These data can be viewed with any text-reader software.
Metadata_Reference_Information:
Metadata_Date: 20230324
Metadata_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization:
U.S. Geological Survey, Pacific Coastal and Marine Science Center
Contact_Person: PCMSC Science Data Coordinator
Contact_Address:
Address_Type: mailing and physical
Address: 2885 Mission Street
City: Santa Cruz
State_or_Province: CA
Postal_Code: 95060
Contact_Voice_Telephone: 831-427-4747
Contact_Electronic_Mail_Address: pcmsc_data@usgs.gov
Metadata_Standard_Name: Content Standard for Digital Geospatial Metadata
Metadata_Standard_Version: FGDC-STD-001-1998

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