Microbial Ecology of the Floridan Aquifer near Okeechobee, FL: Uptake and Inactivation Data

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Metadata:

Identification_Information:
Citation:
Citation_Information:
Originator: John T. Lisle
Publication_Date: 20210226
Title:
Microbial Ecology of the Floridan Aquifer near Okeechobee, FL: Uptake and Inactivation Data
Edition: 2.0
Geospatial_Data_Presentation_Form: Tabular digital data
Series_Information:
Series_Name: U.S. Geological Survey Data Release
Issue_Identification: doi:10.5066/P9EOM5RC
Publication_Information:
Publication_Place: St. Petersburg, FL
Publisher: U.S. Geological Survey
Online_Linkage: https://doi.org/10.5066/P9EOM5RC
Description:
Abstract:
This metadata record describes the microbial uptake of nutrients by native planktonic and biofilm-associated bacteria and the inactivation of E. coli, MS2 bacteriophage, polio virus and Cryptosporidium parvum in the Upper Floridan Aquifer (approximately 1,000 feet below land surface) in the Okeechobee, Florida area. Groundwater samples were collected or accessed via the use of a mesocosm between 2018 and 2020 from a South Florida Water Management District (SFWMD) monitoring well installed at the Kissimmee River Aquifer Storage and Recovery (ASR) facility, which is located at the discharge point of the Kissimmee River into Lake Okeechobee.
Purpose:
Data were collected to quantify the nutrient uptake and microbial inactivation rates under native groundwater geochemical conditions.
Time_Period_of_Content:
Time_Period_Information:
Range_of_Dates/Times:
Beginning_Date: 20180101
Ending_Date: 20201106
Currentness_Reference: ground condition
Status:
Progress: In work
Maintenance_and_Update_Frequency: As needed
Spatial_Domain:
Bounding_Coordinates:
West_Bounding_Coordinate: -80.9280
East_Bounding_Coordinate: -80.8072
North_Bounding_Coordinate: 27.2009
South_Bounding_Coordinate: 27.0885
Keywords:
Theme:
Theme_Keyword_Thesaurus: USGS Metadata Identifier
Theme_Keyword: USGS:2684e9d0-bc26-4933-b219-327e9cb38eea
Theme:
Theme_Keyword_Thesaurus: USGS Thesaurus
Theme_Keyword: biogeochemical cycling
Theme_Keyword: nutrient content (water)
Theme:
Theme_Keyword_Thesaurus: Marine Realms Information Bank (MRIB) keywords
Theme_Keyword: nutrient cycle
Theme_Keyword: groundwater
Theme_Keyword: groundwater geochemistry
Place:
Place_Keyword_Thesaurus: Common geographic areas
Place_Keyword: Southern Florida
Access_Constraints: None
Use_Constraints:
Public domain data from the U.S. Government are freely redistributable with proper metadata and source attribution. The U.S. Geological Survey (USGS) requests to be acknowledged as originator of these data in future products or derivative research.
Point_of_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person: John T Lisle
Contact_Organization: Southeast Region: ST. PETE COASTAL & MARINE SC
Contact_Position: Research Microbiologist
Contact_Address:
Address_Type: mailing and physical
Address: 600 4Th Street South
City: St. Petersburg
State_or_Province: FL
Postal_Code: 33701
Country: United States
Contact_Voice_Telephone: 727-502-8140
Contact_Electronic_Mail_Address: jlisle@usgs.gov
Data_Set_Credit: USGS and South Florida Water Management District.
Data_Quality_Information:
Attribute_Accuracy:
Attribute_Accuracy_Report: No formal attribute accuracy tests were conducted.
Logical_Consistency_Report: No formal logical accuracy tests were conducted.
Completeness_Report:
Dataset is considered complete for the information presented, as described in the abstract. Users are advised to read the rest of the metadata record carefully for additional details.
Positional_Accuracy:
Horizontal_Positional_Accuracy:
Horizontal_Positional_Accuracy_Report: No formal positional accuracy tests were conducted.
Vertical_Positional_Accuracy:
Vertical_Positional_Accuracy_Report: No formal positional accuracy tests were conducted.
Lineage:
Process_Step:
Process_Description:
Between 2018 and 2020 groundwater samples were collected from a SFWMD monitoring well located at a study site near Lake Okeechobee, Florida to conduct two types of experiments. The first was a nutrient uptake experiment where a standardized solution of nitrogen (KNO3), phosphorus (K2PO4) and carbon (Na-acetate) was added to each of the respective experimental solutions, then sampled over a period of time to quantify the rates at which the native planktonic and biofilm-associated bacteria removed these nutrients and either incorporated them into bacterial biomass and/or carbon dioxide. The data from the nitrogen removal experiments were generated on a Seal Analytical Auto Analyzer 3, while the data from the phosphorus and carbon uptake experiments were generated on a Perkin Elmer TriCarb liquid scintillation counter following the measurement of samples containing 32P (as phosphate) and 14C (as acetate).
Process_Date: 20190801
Process_Step:
Process_Description:
Between January and October 2020 known concentrations of E. coli, bacteriophage MS2, human enterovirus polio, and Cryptosporidium parvum were added to filtered sterilized groundwater from the same SFWMD monitoring well used for the nutrient uptake experiments and described in the previous step. These solutions of microorganisms were then transferred to diffusion chambers that were suspended in a constant flow of groundwater within a mesocosm at the wellhead. Periodically, a diffusion chamber for each of the microorganisms was recovered from the mesocosm and processed for the recovery of each type of microorganism using methods specific to the recovery of that microorganism.
Process_Date: 20201106
Entity_and_Attribute_Information:
Detailed_Description:
Entity_Type:
Entity_Type_Label:
Upper_Floridan_Aquifer_Microbial_Nutrient_Uptake_And_Inactivation_Data.csv, Upper_Floridan_Aquifer_Microbial_Nutrient_Uptake_And_Inactivation_Data.xlsx
Entity_Type_Definition:
These files include data associated with the analysis of microbial nutrient uptake and physiological inactivation observed in samples collected from the Upper Floridan Aquifer.
Entity_Type_Definition_Source: USGS
Attribute:
Attribute_Label: Geochemical parameter
Attribute_Definition: Groundwater geochemical parameters measured at the well head.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Unrepresentable_Domain:
Temperature, pH, Oxidation Reduction Potential, Specific conductance, Turbidity, Color, Total dissolved solids, Total Alkalinity (as CaCO3), Aluminum, Barium, Boron, Bromide, Calcium, Chloride, Copper, Fluoride, Iron, Magnesium, Manganese, Potassium, Silica, Sodium, Sulfate, Sulfide, Zinc, NO2-N, NO3-N, NH3-N, Total PO4-P, Ortho PO4-P, Total organic carbon, and Dissolved organic carbon.
Attribute:
Attribute_Label: Geochemical parameter units
Attribute_Definition: Geochemical parameter units
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: degrees Celsius
Enumerated_Domain_Value_Definition: Temperature units
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: not applicable
Enumerated_Domain_Value_Definition: There are no units for pH
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: millivolts
Enumerated_Domain_Value_Definition: Oxidation reduction potential units
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: microsiemens/cm
Enumerated_Domain_Value_Definition: Specific conductance units
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: nephelometric turbidity units (NTU)
Enumerated_Domain_Value_Definition: Turbidity units
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: platinum cobalt units (PCU)
Enumerated_Domain_Value_Definition: Color units
Enumerated_Domain_Value_Definition_Source: USGS
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: mg/L
Enumerated_Domain_Value_Definition: Concentration units as milligrams per liter
Enumerated_Domain_Value_Definition_Source: USGS
Attribute:
Attribute_Label: Geochemical parameter mean and standard deviation
Attribute_Definition:
Arithmetic mean with 1 standard deviation value for each of the geochemical parameters.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Unrepresentable_Domain:
The actual measured values for each of the respective geochemical parameters.
Attribute:
Attribute_Label: Time (hrs) Nitrogen Planktonic
Attribute_Definition:
Experimental sample collection times, in hours, for the nitrogen removal experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 169.75
Attribute:
Attribute_Label: NO3-N (mg/L) Planktonic
Attribute_Definition: The concentrations of nitrate-nitrogen observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0414
Range_Domain_Maximum: 0.4231
Attribute:
Attribute_Label: NO2-N (mg/L) Planktonic
Attribute_Definition: The concentrations of nitrite-nitrogen observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0003
Range_Domain_Maximum: 0.3678
Attribute:
Attribute_Label: NH4-N (mg/L) Planktonic
Attribute_Definition: The concentrations of ammonia-nitrogen observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.4267
Range_Domain_Maximum: 0.4342
Attribute:
Attribute_Label: Time (hrs) Nitrogen Biofilm
Attribute_Definition:
Experimental sample collection times, in hours, for the nitrogen removal experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 169.25
Attribute:
Attribute_Label: NO3-N (mg/L) Biofilm
Attribute_Definition: The concentrations of nitrate-nitrogen observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0042
Range_Domain_Maximum: 0.3938
Attribute:
Attribute_Label: NO2-N (mg/L) Biofilm
Attribute_Definition: The concentrations of nitrite-nitrogen observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0006
Range_Domain_Maximum: 0.1241
Attribute:
Attribute_Label: NH4-N (mg/L) Biofilm
Attribute_Definition: The concentrations of ammonia-nitrogen observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.4186
Range_Domain_Maximum: 0.4489
Attribute:
Attribute_Label: Time (hrs) Phosphorus Planktonic
Attribute_Definition:
Experimental sample collection times, in hours, for the phosphorus uptake experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 6.0
Attribute:
Attribute_Label: PO4-P (mg/L) Planktonic
Attribute_Definition: The concentrations of phosphorus observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 0.0032
Attribute:
Attribute_Label: Time (hrs) Phosphorus Biofilm
Attribute_Definition:
Experimental sample collection times, in hours, for the phosphorus uptake experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 6.0
Attribute:
Attribute_Label: PO4-P (mg/L) Biofilm
Attribute_Definition: The concentrations of phosphorus observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 0.477
Attribute:
Attribute_Label: Time (hrs) Carbon Planktonic
Attribute_Definition:
Experimental sample collection times, in hours, for the carbon uptake experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 123.0
Attribute:
Attribute_Label: CO2 (mg/L) Planktonic
Attribute_Definition: The concentrations of carbon dioxide observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 0.24479
Attribute:
Attribute_Label: Biomass (mg/L) Planktonic
Attribute_Definition:
The concentrations of carbon observed in the bacterial biomass samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 0.40887
Attribute:
Attribute_Label: Time (hrs) Carbon Biofilm
Attribute_Definition:
Experimental sample collection times, in hours, for the carbon uptake experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 122.0
Attribute:
Attribute_Label: CO2 (mg/L) Biofilm
Attribute_Definition: The concentrations of carbon dioxide observed in samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 0.38774
Attribute:
Attribute_Label: Biomass (mg/L) Biofilm
Attribute_Definition:
The concentrations of carbon observed in the bacterial biomass samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.0
Range_Domain_Maximum: 1.9413
Attribute:
Attribute_Label: Time (hrs) MS2_1
Attribute_Definition:
Experimental sample collection times, in hours, for the MS2 bacteriophage in the first inactivation experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.00
Range_Domain_Maximum: 504.00
Attribute:
Attribute_Label: MS2_1 (PFU/mL)
Attribute_Definition:
The number of plaque forming units (PFU) of MS2 in inactivation samples.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 1
Range_Domain_Maximum: 2085000001
Attribute:
Attribute_Label: Time (hrs) MS2_2
Attribute_Definition:
Experimental sample collection times, in hours, for the MS2 bacteriophage in the second inactivation experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.00
Range_Domain_Maximum: 886.17
Attribute:
Attribute_Label: MS2_2 Mean (PFU/mL)
Attribute_Definition:
The mean number of plaque forming units (PFU) of MS2 in inactivation samples in the second inactivation experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0
Range_Domain_Maximum: 1585000
Attribute:
Attribute_Label: MS2_2 Standard Deviation (PFU/mL)
Attribute_Definition:
The standard deviation on the mean number of plaque forming units (PFU) of MS2 in inactivation samples in the second inactivation experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0
Range_Domain_Maximum: 137961
Attribute:
Attribute_Label: Time (hrs) Polio
Attribute_Definition:
Experimental sample collection times, in hours, for the polio enterovirus inactivation experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.00
Range_Domain_Maximum: 1390.17
Attribute:
Attribute_Label: Polio (MPN/mL)
Attribute_Definition:
The median most probable number (MPN) of polio virus in each sample.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 35
Range_Domain_Maximum: 3500000
Attribute:
Attribute_Label: Polio MPN Upper 95% Confidence Interval
Attribute_Definition:
The upper 95% confidence interval for the median MPN of polio virus.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 100
Range_Domain_Maximum: 10000000
Attribute:
Attribute_Label: Polio MPN Lower 95% Confidence Interval
Attribute_Definition:
The lower 95% confidence interval for the median MPN of polio virus
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 12
Range_Domain_Maximum: 1200000
Attribute:
Attribute_Label: Time (hrs) Cryptosporidium parvum
Attribute_Definition:
Experimental sample collection times, in hours, for the Cryptosporidium parvum inactivation experiment.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.00
Range_Domain_Maximum: 1390.17
Attribute:
Attribute_Label: Cryptosporidium parvum (MPN/mL)
Attribute_Definition:
The median most probable number (MPN) of Cryptosporidium parvum in each sample.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 1.00
Range_Domain_Maximum: 28000
Attribute:
Attribute_Label: Cryptosporidium parvum MPN Upper 95% Confidence Interval
Attribute_Definition:
The upper 95% confidence interval for the median MPN of Cryptosporidium parvum.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 7.20
Range_Domain_Maximum: 110000
Attribute:
Attribute_Label: Cryptosporidium parvum MPN Lower 95% Confidence Interval
Attribute_Definition:
The lower 95% confidence interval for the median MPN of Cryptosporidium parvum.
Attribute_Definition_Source: USGS
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0.14
Range_Domain_Maximum: 7300
Distribution_Information:
Distributor:
Contact_Information:
Contact_Person_Primary:
Contact_Person: John T Lisle
Contact_Organization: Southeast Region: ST. PETE COASTAL & MARINE SC
Contact_Position: Research Microbiologist
Contact_Address:
Address_Type: mailing and physical
Address: 600 4Th Street South
City: St. Petersburg
State_or_Province: FL
Postal_Code: 33701
Country: United States
Contact_Voice_Telephone: 727-502-8140
Contact_Electronic_Mail_Address: jlisle@usgs.gov
Distribution_Liability:
Although these data have been processed successfully on a computer system at the U.S. Geological Survey (USGS), no warranty expressed or implied is made regarding the display or utility of the data on any other system, or for general or scientific purposes, nor shall the act of distribution constitute any such warranty. The USGS shall not be held liable for improper or incorrect use of the data described or contained herein. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government.
Standard_Order_Process:
Digital_Form:
Digital_Transfer_Information:
Format_Name: CSV, XLXS
Digital_Transfer_Option:
Fees: None
Metadata_Reference_Information:
Metadata_Date: 20201207
Metadata_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person: John T Lisle
Contact_Organization: Southeast Region: ST. PETE COASTAL & MARINE SC
Contact_Position: Research Microbiologist
Contact_Address:
Address_Type: mailing and physical
Address: 600 4Th Street South
City: St. Petersburg
State_or_Province: FL
Postal_Code: 33701
Country: United States
Contact_Voice_Telephone: 727-502-8140
Contact_Electronic_Mail_Address: jlisle@usgs.gov
Metadata_Standard_Name: Content Standard for Digital Geospatial Metadata
Metadata_Standard_Version: FGDC-STD-001-1998

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