All bottom videos were acquired using a SeaViewer 6000 HD Sea-Drop video camera on the MiniSEABOSS. One video (clip 022) was of two stations and was split to create separate videos for each station. Gaps in sequential clip numbers exist because videos taken in the water column were not processed. The tracklines may self-intersect or self-overlap; at times the ship was moving so slowly that the resolution of the Differential Global Positioning System (DGPS) makes a trackline appear to double back on itself.
This dataset includes bottom video in MP4 format and a trackline shapefile of the location of the ship for the duration of the video during USGS survey 2016-037-FA. Twenty-six stations were occupied within the study area, and bottom video was acquired at all 26 stations. Three acquired videos are not included in this publication: two videos of the water column (clip 027 and clip 028) and one video used for camera calibration (clip 031). One video (clip 022) was of two stations; it was split to create separate videos for each station and clipped to the duration that the camera was within view of the sea floor. A total of 26 videos and 26 video tracklines are included in this dataset.
Source_Information:
Source_Citation:
Citation_Information:
Originator: U.S. Geological Survey
Publication_Date: Unpublished Material
Title: Bottom video and navigation data
Geospatial_Data_Presentation_Form: video and tabular digital data
Type_of_Source_Media: disc
Source_Time_Period_of_Content:
Time_Period_Information:
Single_Date/Time:
Calendar_Date: 20160715
Source_Currentness_Reference: ground condition
Source_Citation_Abbreviation: Bottom video and raw navigation files
Source_Contribution:
Bottom video was acquired using the MiniSEABOSS. The observations from video and still cameras and the sediment data are used to explore the nature of the sea floor and, in conjunction with high-resolution geophysical data, to make interpretive maps of sedimentary environments and validate acoustic remote sensing data. This setup of the MiniSEABOSS incorporates a downward-looking SeaViewer 6000 HD Sea-Drop video camera with topside feed, two GoPro HERO4 Black digital cameras, a modified Van Veen sediment sampler, and a dive light. A compass and depth sensor were attached to the sampler as well and are sometimes visible in the top-mounted GoPro to be used for troubleshooting as necessary. The elements of this particular MiniSEABOSS system are held within a stainless-steel frame that measures ~1 x 1 meters. The frame has a stabilizer fin that orients the system as it drifts over the seabed. A dive light was mounted at the top of the frame and aimed downward to illuminate the seabed for photographs. One of the GoPro HERO4 Black cameras was mounted lower, approximately 40 centimeters from the bottom, on the MiniSEABOSS frame and captured bottom photos every 5 seconds and backup video, while the other was mounted higher, approximately 70 centimeters from the bottom of the frame, and recorded additional backup bottom video. Two red lasers were set 20 centimeters apart (both as they are mounted on the MiniSEABOSS frame and as seen in photographs and video on the seabed) for scale measurements. The red laser dots can usually be seen in the imagery depending on the bottom type and distance to the sea floor. A third laser is positioned at an angle so that when it intersects the other lasers, the MiniSEABOSS is at the optimum height (approximately 75 centimeters) off the bottom for a still photograph. The R/V Rafael occupied one of the target stations and the MiniSEABOSS was deployed off the vessel's starboard side. The winch operator lowered the sampler until the sea floor was observed in the top-side live video feed. The vessel and sampler drifted with wind and current for up to a few minutes to ensure a decent image with a clear view of the sea floor and then at most stations the winch operator lowered the Van Veen sampler until it rested on the sea floor. When the system was raised, the Van Veen sampler closed and collected a sample as it was lifted off the sea floor. The sampler was recovered to the deck of the survey vessel where a subsample was taken for analysis at the sediment laboratory at the USGS Woods Hole Coastal and Marine Science Center. Sediment samples were only attempted in areas where collecting a sample would not damage the MiniSEABOSS; therefore, no samples were collected in areas with a cobble, boulder, or rocky seabed, as identified in real time using the top-side live video feed. Bottom video was recorded from the downward-looking SeaViewer 6000 HD Sea-Drop video camera directly on to solid-state drive (SSD) media using an Odyssey7 video recorder. DGPS navigation from a Hemisphere DGPS receiver was logged through HYPACK navigation software and a DataBridge data logger. The DGPS was set to receive fixes at a one-second interval in geographic coordinates (WGS 84). A log file for the survey was saved in ASCII text format.
Process_Step:
Process_Description:
Twenty-six stations were occupied aboard the R/V Rafael during USGS survey 2016-037-FA with the MiniSEABOSS (Blackwood and Parolski, 2001). The MiniSEABOSS was equipped with a Van Veen grab sampler, two GoPro HERO4 Black digital cameras, and a downward-looking SeaViewer 6000 HD Sea-Drop video camera. The R/V Rafael occupied one of the target stations, the MiniSEABOSS was deployed, and then the vessel and MiniSEABOSS drifted with wind and current for up to a few minutes to ensure a decent video with a clear view of the sea floor. Bottom video was recorded from the downward-looking SeaViewer video camera directly on to SSD media using an Odyssey7 video recorder.
Process_Date: 20160715
Source_Produced_Citation_Abbreviation: Original bottom video
Process_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person: Seth Ackerman
Contact_Organization: U.S. Geological Survey
Contact_Position: Geologist
Contact_Address:
Address_Type: mailing and physical address
Address: 384 Woods Hole Rd.
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Country: USA
Contact_Voice_Telephone: 508-548-8700 x2315
Contact_Facsimile_Telephone: 508-457-2310
Contact_Electronic_Mail_Address: sackerman@usgs.gov
Process_Step:
Process_Description:
DGPS navigation from a Hemisphere DGPS receiver was logged through HYPACK navigation software and a DataBridge data logger. The DGPS was set to receive fixes at a one-second interval in geographic coordinates (WGS 84). Dates and times were recorded in Coordinated Universal Time (UTC). A log file for the survey was saved in ASCII text format. An AWK script (awkhypack.gpgga_v0_9.awk) was run on the log file to parse for the GPGGA navigation string and create an ASCII Comma Separated Value (CSV) text file. The output file was then reformatted using an AWK script (nav_time_reformat.awk), creating a final processed navigation file for the entire sampling survey.
Source_Used_Citation_Abbreviation: Raw navigation file
Process_Date: 20160719
Source_Produced_Citation_Abbreviation: Processed navigation file
Process_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person: Seth Ackerman
Contact_Organization: U.S. Geological Survey
Contact_Position: Geologist
Contact_Address:
Address_Type: mailing and physical address
Address: 384 Woods Hole Rd.
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Country: USA
Contact_Voice_Telephone: 508-548-8700 x2315
Contact_Facsimile_Telephone: 508-457-2310
Contact_Electronic_Mail_Address: sackerman@usgs.gov
Process_Step:
Process_Description:
The original video files were copied from the Odyssey7 SSD to the processing computer. A shell script (do_concat_and_TCBurn.sda) was run to join the video clips for each station (the Odyssey7 splits clips into less than 4GB segments), burn the date and time in UTC on to the upper right corner of the video, and transcode the video from MOV to MP4 format. The script also created a text file with the date, start time, and duration of each video recording. One video (clip 022) was of two stations, so it was split to create separate video for each station and clipped to the duration that the camera was within view of the sea floor. The videos were renamed to include the field activity identifier, camera, and date and start time in the ISO 8601 standard in the filename.
Source_Used_Citation_Abbreviation: Original bottom video
Process_Date: 201902
Source_Produced_Citation_Abbreviation: Final bottom video
Source_Produced_Citation_Abbreviation: Start times/durations text file
Process_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person: Seth Ackerman
Contact_Organization: U.S. Geological Survey
Contact_Position: Geologist
Contact_Address:
Address_Type: mailing and physical address
Address: 384 Woods Hole Rd.
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Country: USA
Contact_Voice_Telephone: 508-548-8700 x2315
Contact_Facsimile_Telephone: 508-457-2310
Contact_Electronic_Mail_Address: sackerman@usgs.gov
Process_Step:
Process_Description:
A Jupyter Notebook Python script (Video_trackline_prep_WORKING_v2.ipynb) was run to create a CSV file of the bottom video trackline points by extracting the navigation fixes for each video drift using information from the start times/durations text file. The script reads the video start time and duration from the text file, calculates the video end time, extracts the navigation points that fall within those start and end times, and exports the navigation fixes to a CSV file. The script had an error for the last video (clip 031) because corresponding navigation data were not available. This video is a calibration video and was not included in this publication. This process step and the subsequent process step were performed by the same person, Emily Huntley.
Source_Used_Citation_Abbreviation: Processed navigation file
Source_Used_Citation_Abbreviation: Start times/durations text file
Process_Date: 201902
Source_Produced_Citation_Abbreviation: Bottom video trackline points CSV file
Process_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person: Emily Huntley
Contact_Organization: U.S. Geological Survey
Contact_Position: Geographer/Database Specialist
Contact_Address:
Address_Type: mailing and physical address
Address: 384 Woods Hole Rd.
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Country: USA
Contact_Voice_Telephone: 508-548-8700
Contact_Facsimile_Telephone: 508-457-2310
Contact_Electronic_Mail_Address: ehuntley@contractor.usgs.gov
Process_Step:
Process_Description:
A point shapefile was created using the bottom video trackline points CSV file in Esri ArcGIS (version 10.3.1). The Points to Line tool was then run with the video trackline points as the input features and the video filenames as the line field to create a polyline shapefile of the video tracklines. XTools Pro (version 12.0) for Esri ArcGIS was used to rename, reorganize, and add new fields (Table Operations - Table Restructure) to the polyline shapefile, including an attribute for the station number of the video trackline (FIELD_NO), start time of the bottom video drift in UTC (STARTTIME), end time of the video drift in UTC (ENDTIME), Julian day of collection (JD), date of collection (DATE), year of collection (YEAR), trackline length in meters (LENGTH_M), camera used (CAMERA), survey ID (FA_ID), sampling device used to collect the video (DEVICE_ID), and survey vessel (VEHICLE_ID). XTools Pro changed some of the bottom video trackline features from singlepart to multipart features if they overlapped or intersected themselves. To correct this, the Spatial Join tool was run with the original bottom video tracklines shapefile as the input features and the updated tracklines shapefile as the join features using the intersect match option to add the updated attributes to the original singlepart features. Unnecessary fields created when running the Spatial Join tool were deleted (i.e., Join_Count and TARGET_FID). The Spatial Join tool was then run with the bottom photos shapefile to assign the station number (FIELD_NO) of the video trackline based on any intersecting bottom photos. Three video tracklines did not intersect any bottom photos; two of these videos (clip 027 and clip 028) were of the water column and were deleted, while one (clip 004) was assigned a station number using information from the data acquisition log. Unnecessary fields created when running the Spatial Join tool were deleted (i.e., Join_Count and TARGET_FID). The bottom video tracklines shapefile was then joined with the trackline points shapefile to add the start and end times of the video drifts (STARTTIME and ENDTIME, respectively), Julian day of collection (JD), and date of collection (DATE). Next, the trackline length (LENGTH_M) was calculated using the Calculate Geometry tool (Property=Length; Use coordinate system of the data frame=WGS 1984 UTM Zone 19N; Unit=Meters). Finally, the bottom video line name (LINENAME) was updated to match the new video filenames, which include the field activity identifier, camera, and date and start time in the ISO 8601 standard in the filename.
Source_Used_Citation_Abbreviation: Bottom video trackline points CSV file
Source_Used_Citation_Abbreviation: Data acquisition log
Process_Date: 201902
Source_Produced_Citation_Abbreviation: Bottom video tracklines shapefile
Process_Step:
Process_Description:
Added keywords section with USGS persistent identifier as theme keyword.
Process_Date: 20200807
Process_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey
Contact_Person: VeeAnn A. Cross
Contact_Position: Marine Geologist
Contact_Address:
Address_Type: Mailing and Physical
Address: 384 Woods Hole Road
City: Woods Hole
State_or_Province: MA
Postal_Code: 02543-1598
Contact_Voice_Telephone: 508-548-8700 x2251
Contact_Facsimile_Telephone: 508-457-2310
Contact_Electronic_Mail_Address: vatnipp@usgs.gov