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Pacific Coastal and Marine Science Center

Pacific Coastal and Marine Science Center Publications

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2006

Anima, R.J., Chin, J.L., Conrad, J.E., and Golden, N.E., 2006, Benthic habitat and geologic mapping of the outer continental shelf of north-central California: U.S. Geological Survey Open-File Report 2006-1177, URL: http://pubs.usgs.gov/of/2006/1177.

Balaram, V., Mathur, R., Banakar, V.K., Hein, J.R., Rao, C.R.M., Rao, T.G., and Dasaram, B., 2006, Determination of the platinum-group elements (PGE) and gold (Au) in ferromanganese nodule reference samples by nickel sulfide fire-assay and Te-coprecipitation with ICP-MS: Indian Journal of Marine Sciences, v. 35, pp. 7–16.

Barnard, P.L., Hanes, D.M., Lescinski, J., and Elias, E., 2006, Monitoring and modeling nearshore dredge disposal for indirect beach nourishment, Ocean Beach, San Francisco: 30th International Conference on Coastal Engineering, Conference Proceedings, San Diego, CA, 13 p.

Barnard, P.L., Hanes, D.M., Kvitek, R.G., and Iampietro, P.J., 2006, Sand waves at the mouth of San Francisco Bay, California: U.S. Geological Survey Scientific Investigations Map 2944, 5 p., URL: https://pubs.usgs.gov/sim/2006/2944/.

Barnard, P.L., Hanes, D.M., Rubin, D.M., and Kvitek, R.G., 2006, Giant sand waves at the mouth of San Francisco Bay: EOS Transactions, v. 87 no. 29, pp. 285–289, URL: https://doi.org/10.1029/2006EO290003.

Barnard, P.L., 2006, Sand waves of the Golden Gate: 2006 Ecosystem Observations, Monterey Bay National Marine Sanctuary, 2 p.

Barnard, P.L., and Hanes, Daniel M., 2006, Coastal monitoring of the May 2005 dredge disposal offshore of Ocean Beach, San Francisco, Calif. U.S. Geological Survey Open-File Report 2006-1140, URL: http://pubs.usgs.gov/of/2006/1140/.

Barnard, P.L., Owen, L.A. and Finkel, R.C., 2006, Quaternary fans and terraces in the Khumbu Himal south of Mount Everest; their characteristics, age and formation: Journal of the Geological Society, London, v. 163, pp. 383–399.

Barnard, P.L., Owen, L.A., Finkel, R.C. and Asahi, K., 2006, Landscape response to deglaciation in a high relief, monsoon-influenced alpine environment, Langtang Himal, Nepal: Quaternary Science Reviews, v. 25 no. 17-18, pp. 2162–2176.

Barth, G.A., Scholl, David W. and Childs Jonathan R., 2006, Possible Deep-Water Gas Hydrate Accumulations in the Bering Sea, in Fire in the Ice: DOE hydrate newsletter,, v. 6 no. 3, URL: http://www.netl.doe.gov/technologies/oil-gas/publications/Hydrates/Newsletter/HMNewsFall06.pdf#page=10.

Basu, S., Stuart, F.M., Klemm, V., Korschinek, G., Knie, K., and Hein, J.R., 2006, Helium isotopes in ferromanganese crusts from the central Pacific Ocean: Geochimica et Cosmochimica Acta, v. 70, pp. 3996–4006, doi: 10.1016/j.gca.2006.05.015.

Bothner, M.H., Reynolds, R.L., Casso, M.A., Storlazzi, C.D., and Field, M.E., 2006, Quantity, composition, and source of sediment collected in sediment traps along the fringing coral reef off Molokai, Hawaii: Marine Pollution Bulletin, v. 52 no. 9, pp. 1034–1047, doi: 10.1016/j.marpolbul.2006.01.008.

Bruns, T.R., Alpers, C.N., and Carlson, P., 2006, Distribution, thickness, and volume of fine-grained sediment from precipitation of metals from acid-mine waters in Keswick Reservoir, Shasta County, California: U.S. Geological Survey Open-File Report 2006-1377, URL: https://pubs.usgs.gov/of/2006/1377/.

Buczkowski, B.J., Reid, J.A., Jenkins, C.J., Reid, J.M., Williams, S.J., and Flocks, J.G., 2006, usSEABED: Gulf of Mexico and Caribbean (Puerto Rico and U.S. Virgin Islands) offshore surficial sediment data release: U.S. Geological Survey Data Series 146, 10 p., URL: http://pubs.usgs.gov/ds/2006/146/.

Calvert, A.J., Ramachandran, K., Kao, H., and Fisher, Michael A., 2006, Local thickening of the Cascadia forearc crust and the origin of seismic reflectors in the uppermost mantle: Tectonophysics, v. 420, pp. 175–188.

Carr, R.S., Nipper, Marion, Field, Michael, and Biedenbach, James M., 2006, Coastal circulation and sediment dynamics in Hanalei Bay, Kaua'i, part III, studies of sediment toxicity: U.S. Geological Survey Open-File Report 2006-1147, URL: http://pubs.usgs.gov/of/2006/1147/.

Cetin, K.O., Seed, R.B., Armen Der Kiureghian, M., Tokimatsu, K., Harder, L.F. Jr., Kayen, Robert E., Moss, R.E.S.Cetin, K.O., Seed, R.B., Armen Der Kiureghian, M., Tokimatsu, K., Harder, L.F. Jr., Kayen, Robert E., Moss, R.E.S., 2006, Closure to SPT-based probabilistic and deterministic assessment of seismic soil liquefaction potential: Journal of Geotechnical and Geoenvironmental Engineering, American Society of Civil Engineers, v. 132 no. 4, pp. 432–435.

Chezar, H., and Newman, I., 2006, Overview: DVD-video disc set of seafloor transects during USGS research cruises in the Pacific Ocean: U.S. Geological Survey Open-File Report 2004-1101, URL: https://pubs.usgs.gov/of/2004/1101/.

Childs, J.R., and Stevenson, Andrew J., 2006, Swath bathymetric survey of Englebright Lake, Yuba-Nevada Counties, California: U.S. Geological Survey Open-File Report 2006-1346, URL: http://pubs.usgs.gov/of/2006/1346/.

Collins, B.D., and Kayen, Robert, 2006, Applicability of terrestrial LIDAR scanning for scientific studies in Grand Canyon National Park, Arizona: U.S. Geological Survey Open-File Report 2006-1198, URL: http://pubs.usgs.gov/of/2006/1198/.

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Collins, B.D., and Kayen, Robert, 2006, Land-based lidar mapping; a new surveying technique to shed light on rapid topographic change: U.S. Geological Survey Fact Sheet 2006-3111, URL: http://pubs.usgs.gov/fs/2006/3111/.

Collins, B., Minasian, Diane, Reiss, Tom, and Gibbons, Helen, 2006, USGS Scientists Revisit New Orleans Levee Breaks to Collect High-Accuracy Survey Data: U. S. Geological Survey Sound Waves, May, 2006, URL: http://soundwaves.usgs.gov/2006/05/.

Dartnell, P., Barnard, P., Chin, J.L., Hanes, D., Kvitek, R.G., Iampietro, P.J., and Gardner, J.V., 2006, Under the Golden Gate Bridge--Views of the Sea Floor Near the Entrance to San Francisco Bay, CA: U. S. Geological Survey Scientific Investigations Map 2917, URL: http://pubs.usgs.gov/sim/2006/2917/.

Draut, A.E., Clift, P.D., 2006, Sedimentary Processes in Modern and Ancient Oceanic Arc Settings: Evidence from the Jurassic Talkeetna Formation of Alaska and the Mariana and Tonga Arcs, Western Pacific: Journal of Sedimentary Research, v. 76 no. 3, pp. 493–514, doi: 10.2110/jsr.2006.044.

Draut, A.E., Field, M.E., Bothner, M.H., Logan, J.B., Casso, M.A., Baldwin, S.M., and Storlazzi, C.D., 2006, Coastal circulation and sediment dynamics in Hanalei Bay, Kaua'i, part II, tracking recent fluvial sedimentation; isotope stratigraphy obtained in summer 2005: U.S. Geological Survey Open-File Report 2006-1125, 52 p., URL: http://pubs.usgs.gov/of/2006/1125/.

Draut, A., 2006, Studying the Elwha River, Washington, in Preparation for Dam Removal: U. S. Geological Survey Sound Waves, November/December 2006, URL: http://soundwaves.usgs.gov/2006/11/fieldwork3.html.

Draut, A.E., and Rubin, David M., 2006, Measurements of wind, aeolian sand transport, and precipitation in the Colorado River corridor, Grand Canyon, Arizona; January 2005 to January 2006: U.S. Geological Survey Open-File Report 2006-1188, URL: http://pubs.usgs.gov/of/2006/1188/.

Draut, A.E., Clift, Peter D., and Blodgett, Robert B., 2006, Field-trip guide to volcanic and volcaniclastic deposits of the Lower Jurassic Talkeetna Formation, Sheep Mountain, south-central Alaska: U.S. Geological Survey Open-File Report 2006-1124, URL: http://pubs.usgs.gov/of/2006/1124/.

Elfrink, B., Hanes, D.M., Ruessink, B.G., 2006, Parameterization and simulation of near bed orbital velocities under irregular waves in shallow water: Coastal Engineering, v. 53 no. 11, pp. 915–927, doi: 10.1016/j.coastaleng.2006.06.002.

Embley, R.W., Chadwick, J., W.W., Baker, E.T., Butterfield, D.A., Resing, J.A., de Ronde, C.E.J., Tunnicliffe, V., Lupton, J.E., Juniper, S.K., Rubin, K.H., Stern, R.J., Lebon, G.T., Nakamura, K.-I., Merle, S.G., Hein, J., R., Wiens, D.A., and Tamura, Y., 2006, Long-term eruptive activity at a submarine arc volcano: Nature, v. 441 no. 7092, pp. 494–497.

Erikson, L., Hanes, D.M., Barnard, P.L., and Gibbs, A.E., 2006, Swash zone characteristics at Ocean Beach, CA: 30th International Conference on Coastal Engineering, Conference Proceedings, San Diego, CA, 13 p.

Eshleman, J., Ruggiero, P., Kingsley, E., Gelfenbaum, G., and George, D., 2006, Capitol Lake, Washington, 2004 data summary: U.S. Geological Survey Data Series 180, URL: http://pubs.usgs.gov/ds/2006/180/.

Faris, A.T., Raymond B. Seed, Robert E. Kayen, Jiaer Wu, 2006, A Semi-Empirical Model for the Estimation of Maximum Horizontal Displacement due to Liquefaction-Induced Lateral Spreading: Proceedings of the 8th U.S. National Conference on Earthquake Engineering April 18-22, 2006, San Francisco, California, USA Paper No. 1323.

Fildani, A., Normark, W.R., Kostic, S., Parker, G., 2006, Channel formation by flow stripping: large-scale scour features along the Monterey East Channel and their relation to sediment waves: Sedimentology, v. 53 no. 6, pp. 1265–1287, doi: 10.1111/j.1365-3091.2006.00812.x.

Fisher, M.A., 2006, Characteristics of seven faults offshore from southern California--the Anacapa-Dume, Channel Islands thrust, Compton thrust, Oakridge Midchannel, Oakridge offshore, Pitas Point-North Channel and Santa Cruz-Catalina Ridge faults: U.S. Geological Survey Open-File Report 2006-1317, 30 p.

Gardner, J.V., 2006, National Seafloor Mapping and Benthic Habitat Studies, Los Angeles, 2006: U. S. Geological Survey Web Page, URL: https://walrus.wr.usgs.gov/pacmaps/la-index.html.

Gardner, J.V., 2006, National Seafloor Mapping and Benthic Habitat Studies, San Diego, 2006: U. S. Geological Survey Web Page, URL: https://walrus.wr.usgs.gov/pacmaps/sd-index.html.

Geist, E.L., Bilek, S.L., Arcas, D., and Titov, V.V., 2006, Differences in tsunami generation between the December 26, 2004 and March 28, 2005 Sumatra earthquakes: Earth Planets Space, v. 58 no. 2, pp. 185–193, doi: 10.1186/BF03353377.

Geist, E.L., Parsons, T., 2006, Probabilistic Analysis of Tsunami Hazards*: Natural Hazards, v. 37 no. 3, pp. 277–314, doi: 10.1007/s11069-005-4646-z.

Geist, E.L., Titov, V.V., and Synolakis, C.E., 2006, Tsunami: wave of change: Scientific American, v. 294, pp. 56–63, URL: http://www.sciam.com/article.cfm?articleID=000CDB86-32E0-13A8-B2E083414B7F0000&ref=sciam&chanID=sa006.

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Gelfenbaum, G., T. Mumford, J. Brennan, H. Case, M. Dethier, K. Fresh, F. Goetz, M. van Heeswijk, T.M., Leschine, M. Logsdon, D. Myers, J. Newton, H. Shipman, C.A. Simenstad, C. Tanner, and D. Woodson, 2006, Coastal Habitats in Puget Sound: A research plan in support of the Puget Sound Nearshore Partnership: Puget Sound Nearshore Partnership Report No. 2006-1, U.S. Geological Survey, Seattle, Washington, URL: http://puget.usgs.gov/psnrp.pdf.

George, D.A., Gelfenbaum, Guy, Lesser, Giles, and Stevens, Andrew W., 2006, Deschutes Estuary Feasibility Study; hydrodynamics and sediment transport modeling: U.S. Geological Survey Open-File Report 2006-1318, URL: http://pubs.usgs.gov/of/2006/1318/.

Gibbs, A., Cochran, S., Storlazzi, C., Grossman, E.E., and Field, M., 2006, Coral Habitat Variability in the Kona Coast National Parks: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

Glenn, C.R., Johnson, A.G., Burnett, B., Peterson, R., Dulaiova, H., Grossman, E.E., and Lucey, P., 2006, Thermal Infrared Surveys and Nutrients Reveal Substantial Submarine Groundwater Discharge Systems Emanating from the Kona Coast of Hawaii: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

Goff, J., Liu, P., Higman, B., Morton, R., Jaffe, Bruce E., Fernando, H., Lynett, P., Fritz, H., and Synolakis, C.,, 2006, The December 26, 2004 Indian Ocean tsunami in Sri Lanka: Earthquake Spectra, v. 22 no. S3, S155-S172 p.

Greene, H.G., Murai, L.Y., Watts, P., Maher, N.A., Fisher, M.A., Paull, C.E., and Eichhubl, P., 2006, Submarine landslides in the Santa Barbara Channel as potential tsunami sources: Natural Hazards and Earth System Sciences, v. 6 no. 1, pp. 63–88, doi: 10.5194/nhess-6-63-2006.

Grossman, E., Hart, P.E., Field, M.E., and Triezenberg, P., 2006, High-resolution chirp seismic reflection data acquired from the Cap de Creus shelf and canyon area, Gulf of Lions, Spain in 2004: U.S. Geological Survey Open-File Report 2006-1247, URL: http://pubs.usgs.gov/of/2006/1247/.

Grossman, E.E., Hood, W.G., Beamer, E.M., and Kayen, R.E., 2006, Characterizing natural vs. human-related change in Puget Sound deltaic habitats: 2005 Puget Sound Georgia Basin Research Conference, Seattle, WA (Mar 29-31, 2005).

Grossman, E.E., Rosenbauer, R., Takesue, R.K., Wyllie-Echeverria, S., Beamer, E.M., and Hood W.R., 2006, Proximal and distal sedimentation impacts to nearshore habitats in the Skagit Delta and San Juan Islands: American Society for Limnology and Oceanography Summer Meeting, Victoria, British Columbia June 4-9, 2006, A46 p.

Grossman, E.E., Barnhardt, W.A., Hart, P., Richmond, B.M., Field, M.E., 2006, Shelf stratigraphy and the influence of antecedent substrate on Holocene reef development, south Oahu, Hawaii: Marine Geology, v. 226 no. 1-2, pp. 97–114, doi: 10.1016/j.margeo.2005.09.012.

Grossman, E.E., Eittreim, S.L., Field, M.E., Wong, F.L., 2006, Shallow stratigraphy and sedimentation history during high-frequency sea-level changes on the central California shelf: Continental Shelf Research, v. 26 no. 10, pp. 1217–1239, doi: 10.1016/j.csr.2006.04.001.

Grossman, E.E., Logan, J., Storlazzi, C.S., Paytan, A., and Street, J., 2006, Mapping Groundwater Discharge and Nutrient Flux across the Fringing Reefs of South Molokai and West Hawaii, Main Hawaiian Islands: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

Gutmacher, C.E., Ross, Stephanie L., Triezenberg, Peter J., Sliter, Ray W., Normark, William R., Edwards, Brian D., 2006, High-resolution boomer seismic-reflection profiles of the shelf off southern California from cruise A-1-00-SC: Santa Monica Bay to San Diego: U.S. Geological Survey Open-File Report 2006-1373, URL: http://pubs.usgs.gov/of/2006/1373/.

Hamilton, P., Noble, M.A., Largier, J., Rosenfeld, L.K., and Robertson, G., 2006, Cross-shelf subtidal variability in San Pedro Bay during summer, 2001: Continental Shelf Research, v. 26, pp. 681–702.

Hapke, C.J., Reid, David, Richmond, Bruce M., Ruggiero Peter, and List, Jeff,, 2006, National Assessment of Shoreline Change part 3; Historical shoreline change and associated coastal land loss along sandy shorelines of the California coast: U.S. Geological Survey Open-File Report 2006-1219, URL: http://pubs.usgs.gov/of/2006/1219/.

Hapke, C., and Reid, David, 2006, The National Assessment of Shoreline Change; A GIS compilation of vector shorelines and associated shoreline change data for the sandy shorelines of the California coast: U.S. Geological Survey Open-File Report 2006-1251, URL: http://pubs.usgs.gov/of/2006/1251/.

Harney, J., Cochrane, G., Etherington, L., Dartnell, P., Golden, N., and Chezar, H., 2006, Geologic characteristics of benthic habitats in Glacier Bay, southeast Alaska: U.S. Geological Survey Open-File Report 2006-1081, URL: https://doi.org/10.3133/ofr20061081.

Hein, J., McIntyre, B., Edwards, B., and Lakota, O., 2006, Quantitative X-ray Diffraction Mineralogy of Los Angeles Basin Core Samples: U.S. Geological Survey Open-File Report 2006-1036, 31 p., URL: http://pubs.usgs.gov/of/2006/1036/.

Hein, J.R., Normark, W.R., McIntyre, B.R., Lorenson, T.D., Powell, C.L., 2006, Methanogenic calcite, 13C-depleted bivalve shells, and gas hydrate from a mud volcano offshore southern California: Geology, v. 34 no. 2, doi: 10.1130/G22098.1.

Hill, P.S., George, D.A., and Grossman, E.E., 2006, A Global Perspective on Defining and Controlling the Mudline,: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

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Intelmann, S.S., and Cochrane, G.R., 2006, Olympic Coast National Marine Sanctuary habitat mapping; survey report and classification of side scan sonar data from surveys HMPR-114-2004-02 and HMPR-116-2005-01: Marine Sanctuaries Conservation Series MSD-06-07, U.S. Department of Commerce, National Oceanic and Atmospheric Administration, National Marine Sanctuary Program, Silver Spring, Md., 35 p.

Intelmann, S.S., Beaudoin, J., and Cochrane, G.R., 2006, Normalization and characterization of multibeam backscatter; Koitlah Point to Point of the Arches, Olympic Coast National Marine Sanctuary—Survey HMPR-115-2004-03: Marine Sanctuaries Conservation Series MSD-06-03, U.S. Department of Commerce, National Oceanic and Atmospheric Administration, Marine Sanctuaries Division, Silver Spring, Md., 22 p.

Jaffe, B.E., Borrero, J.C., Prasetya, G.S., Peters, R., McAdoo, B., Gelfenbaum, Guy, Morton, Robert, Ruggiero, Peter, Higman, B., Dengler, L., Hidayat, R., Kingsley, Etienne, Kongko, W., Lukijanto, Moore, A., Titov, V., and Yuliantom E., 2006, Northwest Sumatra and offshore islands field survey after the December 2004 Indian Ocean Tsunami: Earthquake Spectra, v. 22 no. S3, S105-S135 p.

Jaffe, B., and Foxgrover, Amy, 2006, A history of intertidal flat area in South San Francisco Bay, California; 1858 to 2005: U.S. Geological Survey Open-File Report 2006-1262, URL: http://pubs.usgs.gov/of/2006/1262/.

Jaffe, B., and Foxgrover, Amy, 2006, Sediment deposition and erosion in South San Francisco Bay, California from 1956 to 2005: U.S. Geological Survey Open-File Report 2006-1287, URL: http://pubs.usgs.gov/of/2006/1287/.

Kayen, R., Pack, R.T., Bay, J., Sugimoto, S., Tanaka, H., 2006, Terrestrial-LIDAR Visualization of Surface and Structural Deformations of the 2004 Niigata Ken Chuetsu, Japan, Earthquake: Earthquake Spectra, v. 22 no. S1, pp. 147–162, doi: 10.1193/1.2173020.

Kayen, R., Brian D. Collins, Gerald Bawden, Robert T. Pack, 2006, Earthquake Deformation Analysis Using Terrestrial Scanning Laser -Lidar Technology: Proceedings of the 8th U.S. National Conference on Earthquake Engineering April 18-22, 2006, San Francisco, California, USA Paper No. 1587.

Konrad, C.K., C., Pottsmith, C., Melis, Ted, and Rubin, David M., 2006, Real-time analysis of concentrated fluvial suspended sediments: Federal Interagency Sediment Conference, 8 p.

Kvenvolden, K.A., 2006, Organic geochemistry - A retrospective of its first 70 years: Organic Geochemistry, v. 37 no. 1, pp. 1–11, doi: 10.1016/j.orggeochem.2005.09.001.

Lee, H., Ryan, H., Kayen, R.E., Haeussler, P.J., Dartnell, P., and Hampton, M.A., 2006, Varieties of submarine failure morphologies of seismically-induced landslides in Alaskan fjords: Norwegian Journal of Geology, v. 86 no. 3, pp. 221–230, URL: http://njg.geologi.no/vol-81-90/details/17/339-339.

Lorenson, T.D., Colwell, F.S., Delwiche, M., and Dougherty, J.A., 2006, Data report: Acetate and hydrogen concentrations in pore fluids associated with a large gas hydrate reservoir, southern Hydrate Ridge, offshore Oregon, USA: In: Tréhu, A.M., Bohrmann, G., Torres, M.E., and Colwell, F.S. (Eds.). Proceedings of the Ocean Drilling Program: Scientific Results 204Ocean Drilling Program, College Station, TX, doi: 10.2973/odp.proc.sr.204.126.2006.

Martini, M., Sherwood, Chris, Horwitz, Rachel, Ramsey, Andree, Lightsom, Fran, Lacy, Jessie, and Xu, Jingping, 2006, Hydratools Manual Version 1.0, Documentation for a MATLAB?-Based Post-processing Package for the Sontek Hydra: U.S. Geological Survey Open-File Report 2005-1026, URL: http://pubs.usgs.gov/of/2005/1026/.

Morton, R.A., Richmond, Bruce M., Jaffe, Bruce E., and Gelfenbaum, Guy, 2006, Reconnaissance investigation of Caribbean extreme wave deposits; preliminary observations, interpretations, and research directions: U.S. Geological Survey Open-File Report 2006-1293, URL: http://pubs.usgs.gov/of/2006/1293/.

Moss, R.E.S., Seed, R.B., Kayen, Robert E., Stewart, J.P., and Der Kiureghian, 2006, Probabilistic seismic soil liquefaction triggering using the CPT: ASCE Journal of Geotechnical and Geoenvironmental Engineering, v. 132 no. 8, pp. 1032–1051.

Moss, R.E.S., Seed, R.B., Kayen, Robert E., Stewart, J.P., and Der Kiureghian, A., 2006, CPT-based probabilistic assessment of seismic soil liquefaction triggering: Pacific Earthquake Engineering Research Center (PEER) PEER Report 2005/15, April 2006, 80 p.

Nicholson, C., Kennett, J., Sorlien, C., Hopkins, S., Behl, R., Normark, W., Sliter, R., Hill, T., Pak, D., Schimmelmann, A., and Cannariato, K., 2006, Extending the High-Resolution Global Climate Record in Santa Barbara Basin: EOS, Transactions, American Geophysical Union 87, pp. 205–208.

Noble, M., Gartner, A., Paulson, A., Xu, J., Josberger, E., and Curran, C., 2006, Transport pathways in the lower reaches of Hood Canal: U.S. Geological Survey Open-File Report 2006-1001, URL: http://pubs.usgs.gov/of/2006/1001/.

Noble, M.A., Xu, J.P., Robertson, G.L., and Rosenfeld, L.K., 2006, Distribution and sources of surfzone bacteria at Huntington Beach before and after disinfection on an ocean outfall - A frequency-domain analysis: Marine Environmental Research, v. 61 no. 5, pp. 494–510, doi: 10.1016/j.marenvres.2006.02.006.

Normark, W., Piper, D., Sliter, R., Triezenberg, P., and Gutmacher, C., 2006, Digital single-channel seismic-reflection data from western Santa Monica Basin: U.S. Geological Survey Open-File Report 2006-1180, URL: http://pubs.usgs.gov/of/2006/1180/.

Normark, W.R., Piper, D.J.W., Sliter, R., 2006, Sea-level and tectonic control of middle to late Pleistocene turbidite systems in Santa Monica Basin, offshore California: Sedimentology, v. 53 no. 4, pp. 867–897, doi: 10.1111/j.1365-3091.2006.00797.x.

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Parsons, T., 2006, M≥7.0 earthquake recurrence on the San Andreas fault from a stress renewal model: Journal of Geophysical Research, v. 111, doi: 10.1029/2006JB004415.

Parsons, T., 2006, Tectonic stressing in California modeled from GPS observations: Journal of Geophysical Research, v. 111 no. B03407, doi: 10.1029/2005JB00394.

Parsons, T., Thompson, G.A., Cogbill, A.H., 2006, Earthquake and volcano clustering via stress transfer at Yucca Mountain, Nevada: Geology, v. 34 no. 9, doi: 10.1130/G22636.1.

Parsons, T., Yeats, R.S., Yagi, Y., Hussain, A., 2006, Static stress change from the 8 October, 2005 M = 7.6 Kashmir earthquake: Geophysical Research Letters, v. 33 no. 6, doi: 10.1029/2005gl025429.

Paulson, A.J., Konrad, C. P., Frans, L.M., Noble, Marlene A., Kendall, C., Josberger, E.G., Huffman, R.L., and Olsen, T.D., 2006, Freshwater and saline loads of dissolved inorganic nitrogen to Hood Canal and Lynch Cove, western Washington: U.S. Geological Survey Scientific Investigations Report 2006-5106, URL: http://pubs.usgs.gov/sir/2006/5106/.

Plumlee, G.S., Meeker, G.P., Lovelace, J.K., Rosenbauer, Robert J., Lamothe, P.J., Furlong, E.T., Demas, C.R., and Nilsen, Elena B., 2006, U.S. Geological Survey environmental characterization of flood sediments left in the New Orleans area after Hurricanes Katrina and Rita, 2005-Progress Report: U.S. Geological Survey Open-File Report 2006-1023, 74 p., URL: http://pubs.usgs.gov/of/2006/1023/.

Presto, M.K., Ogston, A.S., Storlazzi, C.D., and Field, M.E., 2006, Temporal and spatial variability in the flow and dispersal of suspended-sediment on a fringing reef flat, Molokai, Hawaii: Estuarine, Coastal and Shelf Science, v. 67 no. 1-2, pp. 67–81, doi: 10.1016/j.ecss.2005.10.015.

Reid, J.A., Reid, J.M., Jenkins, C.J., Zimmermann, M., Williams, S.J., and Field, M.E., 2006, usSEABED: Pacific coast (California, Oregon, Washington) offshore surficial-sediment data release: U.S. Geological Survey Data Series 182, URL: http://pubs.usgs.gov/ds/2006/182/.

Richmond, B.M., Jaffe, B.E., Gelfenbaum, G., and Morton, R.A., 2006, Geologic Impacts of the 2004 Indian Ocean Tsunami on Indonesia, Sri Lanka, and the Maldives: In: Scheffers, A., and Kelletat, D. (Eds.), Zeitschrift für Geomorphologie, Supplementbände. Tsunamis, Hurricanes and Neotectonics as Driving Mechanisms in Coastal Evolution: Proceedings of the Bonaire Field Symposium, March 2-6, 2006, A contribution to IGCP 495, Stuttgart, Germany, , pp. 235–251.

Rosenfeld, L.K., McGee, C., Robertson, G., Noble, M.A., and Jones, B., 2006, Temporal and spatial variability of fecal indicator bacteria in the surf zone off Huntington Beach, CA: Marine Environmental Research, v. 61 no. 5, pp. 471–493.

Rubin, D.M., 2006, Ripple Effect: Unforeseen Applications of Sand Studies: Eos, v. 87 no. 30, pp. 293–297.

Rubin, D.M., and Carter, C.L., 2006, Bedforms and cross-bedding in animation: SEPM Atlas Series, no. 2, DVD.

Rubin, D.M., and Carter, Carissa L., 2006, Cross-bedding, bedforms, and paleocurrents: SEPM Concepts in Sedimentology and Paleontology, v. 1, 195 p.

Rubin, D.M., Chezar, Henry, Harney, Jodi N., Topping, David J., Melis, Theodore S., and Sherwood, Christopher R., 2006, Underwater microscope for measuring spatial and temporal changes in bed-sediment grain size: U.S. Geological Survey Open-File Report 2006-1360, URL: http://pubs.usgs.gov/of/2006/1360/.

Ryan, H.F., and Noble, M.A., 2006, Alongshore wind forcing of coastal sea level as a function of frequency: Journal of Physical Oceanography, v. 36 no. 11, pp. 2173–2184.

Scott, S., Atmanand, M.A., Hein, James R., Heydon, D., and Morgan, C., 2006, Mineral deposits in the sea; a future resource: Report of the ECOR (Engineering Committee on Oceanic Resources) Specialist Panel on Marine Mining, London, 23 March, 2006, 13 p.

Sherwood, C.R., Lacy, J.R., Voulgaris, G., 2006, Shear velocity estimates on the inner shelf off Grays Harbor, Washington, USA: Continental Shelf Research, v. 26 no. 17-18, pp. 1995–2018, doi: 10.1016/j.csr.2006.07.025.

Snyder, N.P., Wright, S.A., Alpers, C.N., Flint, L.E., Holmes, C.W., and Rubin, D.M., 2006, Reconstructing depositional processes and history from reservoir stratigraphy: Englebright Lake, Yuba River, northern California: Journal of Geophysical Research, v. 111 no. F4, doi: 10.1029/2005JF000451.

Stamski, R.E., and Field, Michael E., 2006, Characterization of sediment trapped by macroalgae on a Hawaiian reef flat: Estuarine, Coastal and Shelf Science, v. 166 no. 1-2, pp. 211–216.

Stein, R.S., Toda, S., Parsons, T., Grunewald, E., 2006, A new probabilistic seismic hazard assessment for greater Tokyo: Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, v. 364 no. 1845, pp. 1965–1988, doi: 10.1098/rsta.2006.1808.

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Storlazzi, C., Presto, M., Logan, J., and Field, M., 2006, Coastal Circulation and Sediment Dynamics in Hanalei Bay, Kauai. PART I: Measurements of waves, currents, temperature, salinity and turbidity: June - August, 2005: U.S. Geological Survey Open-File Report 2006-1085, 35 p., URL: http://pubs.usgs.gov/of/2006/1085/.

Storlazzi, C.D., Brown, E.K., and Field, M.E., 2006, The application of acoustic Doppler current profilers to measure the timing and patterns of coral larval dispersal: Coral Reefs, v. 25 no. 3, pp. 369–381, doi: 10.1007/s00338-006-0121-x.

Storlazzi, C.D., McManus, M.A., Logan, J.B., McLaughlin, B.E., 2006, Cross-shore velocity shear, eddies and heterogeneity in water column properties over fringing coral reefs: West Maui, Hawaii: Continental Shelf Research, v. 26 no. 3, pp. 401–421, doi: 10.1016/j.csr.2005.12.006.

Street, J.H.S., J.H., Grossman, E.E., and Paytan, A., 2006, Submarine Groundwater Discharge and Nutrient Subsidies to the Leeward Shores of Maui, Moloka'i and Hawai'i Estimated Using Radium Isotopes: Eos Trans: AGU, 87(36), Ocean Sci. Meet. Suppl., Abstract OS46N-13.

Tanaka, Y., S. Nagata, K. L. Knudsen, and R. Kayen, 2006, Assessment of Ground Deformation due to Soil Liquefaction in the San Jose, California Area by Using Geotechnical IT: Proceedings of the 8th U.S. National Conference on Earthquake Engineering April 18-22, 2006, San Francisco, California, USA Paper No. 1522.

ten Brink, U.S., Geist, E.L., Andrews, B.D., 2006, Size distribution of submarine landslides and its implication to tsunami hazard in Puerto Rico: Geophysical Research Letters, v. 33 no. 11, doi: 10.1029/2006gl026125.

ten Brink, U.S., Geist, E.L., Lynett, P.J., and Andrews, B.D., 2006, Submarine slides north of Puerto Rico and their tsunami potential, in Mercado, A., and Liu, P., eds., Caribbean tsunami hazard: , Caribbean Tsunami Hazard. World Scientific, Singapore, pp. 67–90 doi: 10.1142/9789812774613_0004.

Topping, D.J., Rubin, David M., Schmidt, J.C., Hazel, J., Melis, T.S., Wright, S.A., Kaplinski, M., Draut, A.E., and Breedlove, M.J., 2006, Comparison of sediment-transport and bar-response results from the 1996 and 2004 controlled-flood experiments on the Colorado River in Grand Canyon: Federal Interagency Sediment Conference, 8 p.

Topping, D.J., Wright, S.A., Melis, T.S., and Rubin, David M., 2006, High-resolution monitoring of suspended-sediment concentration and grain size in the Colorado River using laser diffraction instruments and a three-frequency acoustic system: Federal Interagency Sediment Conference, 8 p.

Topping, D.J., Rubin, David M., Schmidt, J.C., Hazel, J.E. Jr., Wright, S.A., Kaplinski, M., Draut, Amy E., and Breedlove, M.J., 2006, Comparison of sediment-transport and bar-response results from the 1996 and 2004 controlled-flood experiments on the Colorado River in Grand Canyon: Proceedings of the Joint Eighth Federal Interagency Sedimentation Conference, Reno, Nevada, April 2-6, 2006.

Tsunami Pilot Study Working Group,, 2006, Seaside, Oregon tsunami pilot study; modernization of FEMA flood hazard maps: U.S. Geological Survey Open-File Report 2006-1234, URL: http://pubs.usgs.gov/of/2006/1234/.

U. S. Geological Survey, 2006, National Seafloor Mapping and Benthic Habitat Studies, NW Gulf of Mexico: U. S. Geological Survey Web Page, URL: http://walrus.wr.usgs.gov/pacmaps/wg-index.html.

U. S. Geological Survey, 2006, The December 26, 2004 Indian Ocean Tsunami: Initial Findings on Tsunami Sand Deposits, Damage, and Inundation in Sri Lanka: U. S. Geological Survey Web Page, URL: https://walrus.wr.usgs.gov/tsunami/srilanka05/index.html.

Vera-Grunauer, X., J.D. Bray, J.M. Pestan, R. Kayen, E. Tandazo, J. Ramirez, J.G. Vera-Grunauer, and W. Mera-Ortiz, 2006, Site Characterization And Seismic Zonation Of Guayaquil City, Ecuador: Proceedings of the 8th U.S. National Conference on Earthquake Engineering April 18-22, 2006, San Francisco, California, USA Paper No. 1467.

Warrick, J.A., and Orzech, K.M., 2006, The effects of urbanization on discharge and suspended-sediment concentrations in a southern California river, in Acevedo, William, Taylor, Janis, Hester, Dave J., Mladinich, Carol S., and Glavac, Sonya, eds., Rates, trends, causes, and consequences of urgan land-use change in the United States: U.S. Geological Survey Professional Paper 1726, pp. 163–170, URL: http://pubs.usgs.gov/pp/pp1726/.

Williams, S.J., Arsenault, M.A., Poppe, L.J. Reid, J.A., Reid, J.M., and C.J. Jenkins, 2006, Surficial Sediment Character of the New York-New Jersey Offshore Continental Shelf Region: A GIS Compilation, U.S. Geological Surve: U.S. Geological Survey Open-File Report 2006-1046, URL: http://pubs.usgs.gov/of/2006/1046/.

Wong, F.L., Venturato, A.J., and Geist, E.L., 2006, Seaside, Oregon, tsunami pilot study--Modernization of FEMA flood hazard maps; GIS Data: U. S. Geological Survey Data Series 236, URL: http://pubs.usgs.gov/ds/2006/236/.

Yanko-Hombach, V., Koral, H., Avsar, N., Motnenko, I., and McGann, Mary,, 2006, Geomorphological, depositional and foraminiferal indicators of Late Quaternary tectonic uplift in Iskenderun Bay, Turkey, in Dilek, Y., and Pavlides, S., eds., Postcollisional tectonics and magmatism in the Mediterranean region and Asia: Geological Society of America Special Paper 409, pp. 591–614.

2005

Adams, P.N., 2005, Nearshore wave-induced cyclical flexing of sea cliffs: Journal of Geophysical Research, v. 110 no. F2, doi: 10.1029/2004jf000217.

Anima, R., Clifton, H., Reiss, C., and Wong, F., 2005, Locations and Descriptions of Gravity, Box, and Push Cores Collected in San Francisco Bay Between January and February, 1990 and 1991: U.S. Geological Survey Open-File Report 2005-1453, 69 p., URL: https://pubs.usgs.gov/of/2005/1453/.

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Baher, S., 2005, Upper-Crustal Structure of the Inner Continental Borderland near Long Beach, California: Bulletin of the Seismological Society of America, v. 95 no. 5, pp. 1957–1969, doi: 10.1785/0120040051.

Banakar, V.K., Rajani, R.P., and Hein, James R., 2005, Genesis and growth history of ferromanganese encrustations from Afanasiy-Nikitin Seamounts in the equatorial India Ocean: Abstracts and Proceedings, 35th Underwater Mining Institute, 1-6 November, Monterey, California, pp. 9–18.

Barnard, P.L., 2005, Modern processes at the mouth of San Francisco Bay: American Shore and Beach Preservation Association, 2005 Conference Field Trip Guide, 21 p.

Barnard, P.L., and Hanes, D.M., 2005, Integrating field research, modeling and remote sensing to quantify morphodynamics in a high-energy coastal setting, Ocean Beach, San Francisco, California: American Society of Civil Engineers, 5th International Conference on Coastal Dynamics 2005 Conference Proceedings, Barcelona, Spain,, 14 p.

Barnhardt, W.A., Richmond, B.M., Grossman, E.E., Hart, P., 2005, Possible modes of coral-reef development at Molokai, Hawaii, inferred from seismic-reflection profiling: Geo-Marine Letters, v. 25 no. 5, pp. 315–323, doi: 10.1007/s00367-005-0214-5.

Barth, G., 2005, Methane gas volume expansion ratios and ideal gas deviation factors for the deep-water Bering Sea basins: U.S. Geological Survey Open-File Report 2005-1451, URL: http://pubs.usgs.gov/of/2005/1451/.

Cochran-Marquez, S., 2005, Moloka'i Benthic Habitat Mapping: U.S. Geological Survey Open-File Report 2005-1070, URL: http://pubs.usgs.gov/of/2005/1070/.

Cochrane, G., Conrad, J., Reid, J., Fangman, S., and Golden, N., 2005, Nearshore benthic habitat GIS for the Channel Islands National Marine Sanctuary and southern California state fisheries reserves volume II: U.S. Geological Survey Open-File Report 2005-1170, URL: http://pubs.usgs.gov/of/2005/1170/.

Dartnell, P., Cochrane, G., and Dunaway, M.E., 2005, Multibeam Bathymetry and Backscatter Data: Northeastern Channel Islands Region, Southern California: U.S. Geological Survey Open-File Report 2005-1153, URL: http://pubs.usgs.gov/of/2005/1153/.

Dean, W., Forester, R., Colman, S., Liu, A., Skipp, G., Simmons, K., Swarzenski, P., and Anderson, R., 2005, Modern and glacial-Holocene carbonate sedimentation in Bear Lake, Utah-Idaho: U.S. Geological Survey Open-File Report 2005-1124, URL: http://pubs.usgs.gov/of/2005/1124/.

Dohmen-Janssen, C.M., Hanes, D.M., 2005, Sheet flow and suspended sediment due to wave groups in a large wave flume: Continental Shelf Research, v. 25 no. 3, pp. 333–347, doi: 10.1016/j.csr.2004.10.009.

Drake, P.T., McManus, M.A., and Storlazzi, C.D., 2005, Local wind forcing of the Monterey Bay area inner shelf: Continental Shelf Research, v. 25 no. 3, pp. 397–417, doi: 10.1016/j.csr.2004.10.006.

Draut, A., and Rubin, D., 2005, Measurements of Wind, Aeolian Sand Transport, and Precipitation in the Colorado River Corridor, Grand Canyon, Arizona -- November 2003 to December 2004: U.S. Geological Survey Open-File Report 2005-1309, URL: http://pubs.usgs.gov/of/2005/1309/.

Draut, A., et al.,, 2005, Sedimentology and stratigraphy of the Palisades, Lower Comanche, and Arroyo Grande areas of the Colorado River corridor, Grand Canyon, Arizona: U.S. Geological Survey Scientific Investigations Report 2005-5072, 68 p., URL: http://pubs.usgs.gov/sir/2005/5072/.

Draut, A.E., Kineke, G.C., Velasco, D.W., Allison, M.A., and Prime, R.J., 2005, Influence of the Atchafalaya River on recent evolution of the chenier-plain inner continental shelf, northern Gulf of Mexico: Continental Shelf Research, v. 25 no. 1, pp. 91–112, doi: 10.1016/j.csr.2004.09.002.

EERI Team, including K., Robert E., 2005, Preliminary observations on the Niigata Ken Chuetsu, Japan, Earthquake of October 23, 2004: EERI Special Earthquake Report—January 2005, Earthquake Engineering Research Institute, Oakland, Calif., 12 p., URL: http://www.eeri.org/lfe/pdf/japan_niigata_eeri_preliminary_report.pdf.

Farnsworth, K.L., and Warrick, Jonathan A., 2005, Sources of fine sediment to the southern California coast; computation of a "mud budget": Report submitted to the California Coastal Sediment Management Workgroup, URL: http://dbw.ca.gov/csmw/csmwhome.htm.

Fisher, M., Normark, W., Langenheim, V., Calvert, A., and Sliter, R., 2005, Marine Geology and Earthquake Hazards of the San Pedro Shelf Region, Southern California: U.S. Geological Survey Professional Paper 1687, URL: http://pubs.usgs.gov/pp/pp1687/.

Fisher, M.A., 2005, Neotectonics of the Offshore Oak Ridge Fault near Ventura, Southern California: Bulletin of the Seismological Society of America, v. 95 no. 2, pp. 739–744, doi: 10.1785/0120040126.

Fisher, M.A., Hyndman, R.D., Johnson, S.Y., Brocher, T.M., Crosson, R.S., Wells, R.E., Calvert, A.J., and ten Brink, U.S., 2005, Crustal structure and earthquake hazards of the subduction zone in southwestern British Columbia and western Washington, in Kayen, R., ed., Earthquake hazards of the Pacific Northwest costal and marine regions: U.S. Geological Survey Professional Paper 1661-C, URL: http://pubs.usgs.gov/pp/pp1661c/.

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Fisher, M.A., Langenheim, V.E., Sorlien, C.C., Dartnell, P., Sliter, R.W., Cochrane, G.R., and Wong, F.L., 2005, Recent deformation along the offshore Malibu Coast, Dume, and related faults west of Point Dume, southern California: Bulletin of the Seismological Society of America, v. 95 no. 6, pp. 2486–2500, URL: https://doi.org/10.1785/0120050042.

Fisher, M.A., Normark, W.R., Greene, H.G., Lee, H.J., Sliter, R.W., 2005, Geology and tsunamigenic potential of submarine landslides in Santa Barbara Channel, Southern California: Marine Geology, v. 224 no. 1-4, pp. 1–22, doi: 10.1016/j.margeo.2005.07.012.

Foxgrover, A., and Jaffe, B., 2005, South San Francisco Bay 2004 topographic lidar survey: Data overview and preliminary quality assessment: U.S. Geological Survey Open-File Report 2005-1284, URL: http://pubs.usgs.gov/of/2005/1284/.

Geist, E., 2005, Local tsunami hazards in the Pacific Northwest from Cascadia subduction zone earthquakes: In: Kayen, R. (Ed.). U.S. Geological Survey Professional Paper 1661-B(Earthquake Hazards of the Pacific Northwest Coastal and Marine Regions), 17 p., URL: http://pubs.usgs.gov/pp/pp1661b/.

Geist, E.L., and Parsons, T., 2005, Triggering of Tsunamigenic Aftershocks from Large Strike-Slip Earthquakes: Analysis of the November 2000 New Ireland Earthquake Sequence: Geochemistry, Geophysics, Geosystems, v. 6 no. 10, doi: 10.1029/2005gc000935.

Geist, E.L., 2005, Rapid tsunami models and earthquake source parameters; far-field and local applications: ISET Journal of Earthquake Technology, v. 42, pp. 127–136.

George, D., Gelfenbaum, G., Lesser, G., Barnard, B., Morrison, S., and Lund, P., 2005, The Deschutes Estuary Restoration Feasibility Study: development of a process-based morphological model: Puget Sound Georgia Basin Research Conference Proceedings, March 2005.

Gibbs, A., Grossman, E., and Richmond, B., 2005, Summary and preliminary interpretations of U.S. Geological Survey cruise A202HW: Underwater video surveys collected off of Oahu, Molokai, and Maui, Hawaii June-July 2002: U.S. Geological Survey Open-File Report 2005-1244, URL: http://pubs.usgs.gov/of/2005/1244/.

Gibbs, A., Grossman, E., Logan, J., Cochran-Marquez, S., Storlazzi, C., Field, M., Paytan, A., and Street, J., 2005, Seafloor Habitat Mapping And Oceanographic Studies In The Kona Coast National Parks: Geological Society of America 2004 Annual Mtg. Abstract 45-7, URL: http://gsa.confex.com/gsa/2004AM/finalprogram/abstract_79346.htm.

Grossman, E.E., Hart, P., and Field, M.E., 2005, Evidence of recent sediment storage and transport from shallow seismic stratigraphy on the Cap de Creus shelf, Spain: EuroSTRATAFORM - Promess Joint Meeting, Salamanca, Spain, October 24-27, 2005.

Grossman, E., 2005, Deltaic Habitats in Puget Sound--Natural Versus Human-Related Change: U. S. Geological Survey Sound Waves, January 2005, URL: http://soundwaves.usgs.gov/2005/01/fieldwork3.html/.

Hapke, C., and Green, K., 2005, Decadal-scale analysis of coastal landslides along the Big Sur coast: Rates and processes: U.S. Geological Survey Open-File Report 2005-1434, URL: http://pubs.usgs.gov/of/2005/1434/.

Hapke, C., and Green, K., 2005, Rates of landsliding and cliff retreat along the Big Sur coast, California-measuring a crucial baseline: U.S. Geological Survey Fact Sheet 2004-3099, URL: http://pubs.usgs.gov/fs/2004/3099/.

Hapke, C., Gmirkin, R., and Richmond, B., 2005, Coastal Change Rates and Patterns: Kaloko-Honokohau National Historical Park, Hawai'i: U.S. Geological Survey Open-File Report 2005-1069, URL: http://pubs.usgs.gov/of/2005/1069/.

Hart, P.E., Hutchinson, D. R., and Lee, M., 2005, High-resolution multichannel seismic-reflection data acquired in the northern Gulf of Mexico, 2003: U.S. Geological Survey Open-File Report 2005-1411, URL: http://pubs.usgs.gov/of/2005/1411/.

Hein, J.R., Koschinsky, A., McIntyre, B.R., 2005, Mercury- and Silver-Rich Ferromanganese Oxides, Southern California Borderland: Deposit Model and Environmental Implications: Economic Geology, v. 100 no. 6, pp. 1151–1168, doi: 10.2113/gsecongeo.100.6.1151.

Hein, J.R., McIntyre, B.R., Piper, D.Z., 2005, Marine mineral resources of Pacific Islands - a review of the Exclusive Economic Zones of islands of U.S. affiliation, excluding the State of Hawaii: U.S. Geological Survey Circular 1286, 69 p., URL: http://pubs.usgs.gov/circ/2005/1286/.

Higgins, S.A., Jaffe, B. E., and Smith, R. E., 2005, Bathychronology: Reconstructing historical sedimentation from bathymetric data in a GIS: U.S. Geological Survey Open-File Report 2005-1273, URL: http://pubs.usgs.gov/of/2005/1273/.

Hutchinson, D., et al.,, 2005, A Preliminary Assessment of Geologic Framework and Sediment Thickness Studies Relevant to Prospective US Submission on Extended Continental Shelf: U.S. Geological Survey Open-File Report 2004-1447, URL: http://pubs.usgs.gov/of/2004/1447/.

Kayen, R., Carkin, B., Minasian, D., and Tinsley, J., 2005, Shear wave velocity of the ground near southern California TRINET sites using the spectral analysis of surface waves method (SASW) and parallel-arrayed harmonic-wave sources: U.S. Geological Survey Open-File Report 2005-1365, URL: http://pubs.usgs.gov/of/2005/1365/.

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Kayen, R., Thompson, E., Minasian, D., and Carkin, B., 2005, Shear-wave velocity of the ground near sixty California strong motion recording sites by the Spectral Analysis of Surface Waves (SASW) method and harmonic-wave sources: U.S. Geological Survey Open-File Report 2005-1366, URL: http://pubs.usgs.gov/of/2005/1366/.

Kayen, R.E., 2005, The spectral analysis of surface waves measured at William Street Park, San Jose, California, using swept-sine harmonic waves, in Asten, Michael W., and Boore, David M., eds., Blind comparisons of shear-wave velocities at closely-spaced sites in San Jose, California; proceedings of a workshop held at the U.S. Geological Survey, Menlo Park, May 3, 2004: U.S. Geological Survey Open-File Report 2005-1169, URL: http://pubs.usgs.gov/of/2005/1169/.

Kvenvolden, K.A., Rogers, B.W., 2005, Gaia's breath--global methane exhalations: Marine and Petroleum Geology, v. 22 no. 4, pp. 579–590, doi: 10.1016/j.marpetgeo.2004.08.004.

Lacy, J.R., 2005, Estimating hydrodynamic roughness in a wave-dominated environment with a high-resolution acoustic Doppler profiler: Journal of Geophysical Research, v. 110 no. C6, doi: 10.1029/2003jc001814.

Lee, H.J., 2005, Undersea landslides: extent and significance in the Pacific Ocean, an update: Natural Hazards and Earth Science Systems, v. 5 no. 6, pp. 877–892, doi: 10.5194/nhess-5-877-2005.

Logan, J.B., Field, M. E., and Chavez, P. S., 2005, Bathymetry and selected views of the fringing coral reef, south Molokai, Hawaii: U.S. Geological Survey Scientific Investigations Map 2886, URL: http://pubs.usgs.gov/sim/2005/2886/.

Martini, M., Lightsom, F.L., Sherwood, C.R., Jingping Xu, Lacy, J.R., Ramsey, A., Horwitz, R., 2005, Hydratools, a MATLAB based data processing package for sontek hydra data: Ieee, pp. 147–151 doi: 10.1109/Ccm.2005.1506360.

Nilsen, E.B., and Delaney, M.L., 2005, Factors Influencing the biogeochemistry of sedimentary carbon and phosphorus in the Sacramento-San Joaquin Delta: Estuaries, v. 28 no. 5, pp. 653–663.

Normark, W. and M.G., M.,, 2005, Late Quaternary deposition in the inner basins of the California continental borderland-part A. Santa Monica Basin: U.S. Geological Survey Scientific Investigations Report 2004-5183, URL: http://pubs.usgs.gov/sir/2004/5183/.

Orange, D., García-García, A., Lorenson, T.D., Nittrouer, C., Milligan, T., Miserocchi, S., Langone, L., Correggiari, A., and Trincardi, F., 2005, Shallow gas and flood deposition on the Po Delta; Mediterranean prodelta systems: Marine Geology, v. 222-223, pp. 159–177, doi: 10.1016/j.margeo.2005.06.040.

Palandri, J.L., Rosenbauer, Robert J., and Kharaka, Y.K., 2005, Ferric iron in sediments as a novel CO2 mineral trap - CO2-SO2 reaction with hematite: Applied Geochemistry, v. 20, pp. 2038–2048.

Parsons, et. al., 2005, Crustal Structure of the Cascadia Fore Arc of Washington, in Kayen, R., ed., Earthquake hazards of the Pacific Northwest costal and marine regions: U.S. Geological Survey Professional Paper 1661-D, URL: http://pubs.usgs.gov/pp/pp1661d/.

Parsons, T., 2005, A hypothesis for delayed dynamic earthquake triggering: Geophysical Research Letters, v. 32 no. 4, doi: 10.1029/2004gl021811.

Parsons, T., 2005, Significance of stress transfer in time-dependent earthquake probability calculations: Journal of Geophysical Research, v. 110 no. B5, doi: 10.1029/2004jb003190.

Parsons, T., Bruns, T.R., and Sliter, R., 2005, Structure and mechanics of the San Andreas-San Gregorio fault junction, San Francisco, California: Geochemistry, Geophysics, Geosystems (G3), v. 6 no. 1, doi: 10.1029/2004GC000838.

Paull, C.K., Ussler, W., Lorenson, T., Winters, W., Dougherty, J., 2005, Geochemical constraints on the distribution of gas hydrates in the Gulf of Mexico: Geo-Marine Letters, v. 25 no. 5, pp. 273–280, doi: 10.1007/s00367-005-0001-3.

Polgári, M., Szabó, Z., Szabó-Drubina, M., Hein, J.R., Yeh, H.-W., 2005, A porous silica rock (“tripoli”) in the footwall of the Jurassic Úrkút manganese deposit, Hungary: Composition, and origin through carbonate dissolution: Sedimentary Geology, v. 177 no. 1–2, pp. 87–96, doi: 10.1016/j.sedgeo.2005.02.002.

Reid, J.M., Reid, J.A., Jenkins, C.J., Hastings, M.E., Williams, S.J., and Poppe, L.J, 2005, usSEABED: Atlantic coast offshore surficial sediment data release: U.S. Geological Survey Data Series 118, URL: http://pubs.usgs.gov/ds/2005/118/.

Richmond, B., and Gibbons, Helen, 2005, Assessing Tsunami Impacts in the Republic of Maldives: U. S. Geological Survey Sound Waves, April, 2005, URL: http://soundwaves.er.usgs.gov/2005/04/fieldwork3.html.

Robertson, G.L., Noble, Marlene A., Xu, Jingping, Rosenfeld, L.K., and McGee, C.D., 2005, Temporal and spatial patterns for surf zone bacteria before and after disinfection of the Orange County Sanitation District Effluent: Proceedings, MTS/IEEE Oceans 2005, 050214-16.

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Rosenbauer, R.J., Koksalan, T., and Palandri, J. L., 2005, Experimental investigation of CO2–brine–rock interactions at elevated temperature and pressure; implications for CO2 sequestration in deep-saline aquifers: Fuel Processing Technology, v. 86 no. 14-15, pp. 1581–1597.

Rubin, D., and Carter, C., 2005, Bedforms 4.0: MATLAB code for simulating bedforms and cross-bedding: U.S. Geological Survey Open-File Report 2005-1272, URL: http://pubs.usgs.gov/of/2005/1272/.

Ruggiero, P., Kaminski, G., Gelfenbaum, G., and Voigt, B., 2005, Seasonal to Interannual Morphodynamics along a High-Energy Dissipative Littoral Cell: Journal of Coastal Research, v. 21 no. 3, pp. 553–578.

Sliter, R.W., Normark, William R., and Gutmacher, Christina E., 2005, Multichannel seismic-reflection data acquired off the coast of southern California-Part A 1997, 1998, 1999, and 2000: U.S. Geological Survey Open-File Report 2005-1084, URL: http://pubs.usgs.gov/of/2005/1084/.

Storlazzi, C., and Presto, K., 2005, Coastal Circulation and Sediment Dynamics along West Maui, Hawaii: PART IV: Measurements of waves, currents, temperature, salinity and turbidity in Honolua Bay, Northwest Maui: 2003-2004: U.S. Geological Survey Open-File Report 2005-1068, URL: http://pubs.usgs.gov/of/2005/1068/.

Storlazzi, C., and Presto, K., 2005, Coastal circulation and water column Properties along Kaloko-Honokohau National Historical Park, Hawaii, Part I: Measurements of waves, currents, temperature, salinity and turbidity: April-October 2004: U.S. Geological Survey Open-File Report 2005-1161, URL: http://pubs.usgs.gov/of/2005/1161/.

Storlazzi, C., and Wingfield, D.,, 2005, Spatial and temporal variations in oceanographic and meteorologic forcing along the central California coast, 1980-2002: U.S. Geological Survey Scientific Investigations Report 2005-5085, URL: http://pubs.usgs.gov/sir/2005/5085/.

Storlazzi, C., Russell, M., Presto, K., and Burbank, J., 2005, Flow Patterns and Current Structure at the USS Arizona Memorial: April, 2005: U.S. Geological Survey Open-File Report 2005-1334, URL: http://pubs.usgs.gov/of/2005/1334/.

Storlazzi, C.D., Brown, E.K., Field, M.E., Rodgers, K., and Jokiel, P.L., 2005, A model for wave control on coral breakage and species distribution in the Hawaiian Islands: Coral Reefs, v. 24 no. 1, pp. 43–55, doi: 10.1007/s00338-004-0430-x.

Topping, D.J., Rubin, David M., and Schmidt, J.C., 2005, Regulation of sand transport in the Colorado River by changes in the surface grain size of eddy sandbars over multi-year timescales: Sedimentology, v. 52, pp. 1133–1153.

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