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2013

Barnard, P.L., Erikson, L.H., Elias, E.P.L., Dartnell, P., 2013, Sediment transport patterns in the San Francisco Bay Coastal System from cross-validation of bedform asymmetry and modeled residual flux: Marine Geology, v. 345, pp. 72–95, doi: 10.1016/j.margeo.2012.10.011.

Barnard, P.L., Foxgrover, A.C., Elias, E.P.L., Erikson, L.H., Hein, J.R., McGann, M., Mizell, K., Rosenbauer, R.J., Swarzenski, P.W., Takesue, R.K., Wong, F.L., Woodrow, D.L., 2013, Integration of bed characteristics, geochemical tracers, current measurements, and numerical modeling for assessing the provenance of beach sand in the San Francisco Bay Coastal System: Marine Geology, v. 345, pp. 181–206, doi: 10.1016/j.margeo.2013.08.007.

Barnard, P.L., Jaffe, B.E., Schoellhamer, D.H., 2013, Preface for Special Issue of Marine Geology: Marine Geology, v. 345, pp. 1–2, doi: 10.1016/j.margeo.2013.09.010.

Barnard, P.L., Schoellhamer, D.H., Jaffe, B.E., McKee, L.J., 2013, Sediment transport in the San Francisco Bay Coastal System: An overview: Marine Geology, v. 345, pp. 3–17, doi: 10.1016/j.margeo.2013.04.005.

Batelaan, O., Hughes, D.A., Swarzenski, P.W., Willems, P., Bárdossy, A., Charlet, L., Georgakakos, K.P., Kitanidis, P.K., Syme, G., Corradini, C., 2013, Editorial: Journal of Hydrology: Regional Studies, v. 507, A1-A2 p., doi: 10.1016/j.jhydrol.2013.10.023.

Carkin, B.A., and Kayen, R.E., 2013, Settlement of the USS Arizona, Pearl Harbor, Hawaii: U.S. Geological Survey Scientific Investigations Report 2013-5096, 153 p., URL: http://pubs.usgs.gov/sir/2013/5096/.

Clague, D.A., Dreyer, B.M., Paduan, J.B., Martin, J.F., Chadwick, W.W., Caress, D.W., Portner, R.A., Guilderson, T.P., McGann, M.L., Thomas, H., Butterfield, D.A., and Embley, R.W., 2013, Geologic history of the summit of Axial Seamount, Juan de Fuca Ridge: Geochemistry, Geophysics, Geosystems, v. 14 no. 10, pp. 4403–4443, doi: 10.1002/ggge.20240.

Cochran, S.A., 2013, Photography Applications: In: Goodman, J.A., Purkis, S.J., and Phinn, S.T. (Eds.). Coral reef remote sensing: a guide for mapping, monitoring and management, Springer Netherlands, pp. 29–49, doi: 10.1007/978-90-481-9292-2_2.

Conaway, C.H., Draut, A.E., Echols, K.R., Storlazzi, C.D., and Ritchie, A., 2013, Episodic Suspended Sediment Transport And Elevated Polycyclic Aromatic Hydrocarbon Concentrations In A Small, Mountainous River In Coastal California: Ssc And Pah In The San Lorenzo River: River Research and Applications, v. 29 no. 7, pp. 919–932, doi: 10.1002/rra.2582.

Conaway, C.H., Storlazzi, C.D., Draut, A.E., and Swarzenski, P.W., 2013, Short-term variability of 7Be atmospheric deposition and watershed response in a Pacific coastal stream, Monterey Bay, California, USA: Journal of Environmental Radioactivity, v. 120, pp. 94–103, doi: 10.1016/j.jenvrad.2013.02.004.

Davis, A.C.D., Kvitek, R.G., Mueller, C.B.A., Young, M.A., Storlazzi, C.D., and Phillips, E.L., 2013, Distribution and abundance of rippled scour depressions along the California coast: Continental Shelf Research, v. 69, pp. 88–100, doi: 10.1016/j.csr.2013.09.010.

DeMartini, E., Jokiel, P., Beets, J., Stender, Y., Storlazzi, C., Minton, D., and Conklin, E., 2013, Terrigenous sediment impact on coral recruitment and growth affects the use of coral habitat by recruit parrotfishes (F. Scaridae): Journal of Coastal Conservation, v. 17 no. 3, pp. 417–429, doi: 10.1007/s11852-013-0247-2.

Draut, A.E., and Clift, P.D., 2013, Differential preservation in the geologic record of island-arc sedimentary and tectonic processes: Earth-Science Reviews, v. 116, 57–84 p.

Draut, A.E., Redsteer, M.H., and Amoroso, L., 2013, Recent Seasonal Variations in Arid Landscape Cover and Aeolian Sand Mobility, Navajo Nation, Southwestern United States: In: Giosan, L., Fuller, D.Q., Nicoll, K., Flad, R.K., and Clift, P.D. (Eds.). Climates, Landscapes, and Civilizations, American Geophysical Union, pp. 51–60, doi: 10.1029/2012gm001214.

Draut, A.E., Rubin, D.M., 2013, Assessing Grain-Size Correspondence Between Flow and Deposits of Controlled Floods In the Colorado River, U.S.A: Journal of Sedimentary Research, v. 83 no. 11, pp. 962–973, doi: 10.2110/jsr.2013.79.

Edwards, B.D., Childs, J.R., Triezenberg, P.J., Danforth, W.W., and Gibbons, H., 2013, 2010 Joint United States-Canadian Program to explore the limits of the Extended Continental Shelf aboard U.S. Coast Guard Cutter Healy—Cruise HLY1002: U.S. Geological Survey Open-File Report 2013–1067, 26 p., URL: http://pubs.usgs.gov/of/2013/1067/.

Edwards, B.D., Childs, J.R., Triezenberg, P.J., Danforth, W.W., and Gibbons, Helen, 2013, 2010 Joint United States-Canadian Program to explore the limits of the Extended Continental Shelf aboard U.S. Coast Guard Cutter Healy—Cruise HLY1002: U. S. Geological Survey Open-File Report 2013-1067, URL: http://pubs.usgs.gov/of/2013/1067/.

Elias, E.P.L., Hansen, J.E., 2013, Understanding processes controlling sediment transports at the mouth of a highly energetic inlet system (San Francisco Bay, CA): Marine Geology, v. 345, pp. 207–220, doi: 10.1016/j.margeo.2012.07.003.

Erikson, L.H., Wright, S.A., Elias, E., Hanes, D.M., Schoellhamer, D.H., Largier, J., 2013, The use of modeling and suspended sediment concentration measurements for quantifying net suspended sediment transport through a large tidally dominated inlet: Marine Geology, v. 345, pp. 96–112, doi: 10.1016/j.margeo.2013.06.001.

Ferrero, R.C., Kolak, J.J., Bills, D.J., Bowen, Z.H., Cordier, D.J., Gallegos, T.J., Hein, J.R., Kelley, K.D., Nelson, P.H., Nuccio, V.F., Schmidt, J.M., and Seal, R.R., 2013, U.S. Geological Survey energy and minerals science strategy—A resource lifecycle approach: U.S. Geological Survey Circular 1383–D, 37 p., URL: http://pubs.usgs.gov/circ/1383d/.

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Field, E.H., Biasi, G.P., Bird, P., Dawson, T.E., Felzer, K.R., Jackson, D.D., Johnson, K.M., Jordan, T.H., Madden, C., Michael, A.J., Milner, K.R., Page, M.T., Parsons, T., Powers, P.M., Shaw, B.E., Thatcher, W.R., Weldon, R.J. II, and Zeng, Y., 2013, Uniform California earthquake rupture forecast, version 3 (UCERF3)—The time-independent model: U.S. Geological Survey Open-File Report 2013–1165, 97 p.

Field, M.E., Chezar, H., and Storlazzi, C.D., 2013, SedPods: a low-cost coral proxy for measuring net sedimentation: Coral Reefs, v. 32 no. 1, pp. 155–159, doi: 10.1007/s00338-012-0953-5.

Gallien, T.W., Barnard, P.L., van Ormondt, M., Foxgrover, A.C., and Sanders, B.F.,, 2013, A Parcel-Scale Coastal Flood Forecasting Prototype for a Southern California Urbanized Embayment: Journal of Coastal Research, v. 29 no. 3, pp. 642–656, doi: 10.2112/JCOASTRES-D-12-00114.1.

Geist, E.L., 2013, Near-Field Tsunami Edge Waves and Complex Earthquake Rupture: Pure and Applied Geophysics, v. 170 no. 9-10, pp. 1475–1491, doi: 10.1007/s00024-012-0491-7.

Geist, E.L., Chaytor, J.D., Parsons, T., and ten Brink, U., 2013, Estimation of submarine mass failure probability from a sequence of deposits with age dates: Geosphere, v. 9 no. 2, 287–298 p., doi: 10.1130/GES00829.1.

Geist, E.L., Jones, H., McBride, M., and Fedors, R., 2013, Tsunami flooding, chap. 6 of Nicholson, T.J., and Reed, W.A., 2013: Proceedings of the Workshop on Probabilistic Flood Hazard Assessment NUREG/CP-0302, U.S. Nuclear Regulatory Commission, 61–67 p., URL: http://www.nrc.gov/reading-rm/doc-collections/nuregs/conference/cp0302/.

Geist, E.L., Parsons, T., and ten Brink, U.S., 2013, Statistical testing of hypotheses and assumptions inherent to Probabilistic Tsunami Hazard Analysis (PTHA) [extended abs.], in Nicholson, T.J., and Reed, W.A., 2013: pp. 6–23 – 6–26 URL: http://www.nrc.gov/reading-rm/doc-collections/nuregs/conference/cp0302/.

Gibbons, H., 2013, Training to use New Lidar (Light Detection and Ranging) Scanner in Santa Cruz, California: U. S. Geological Survey Sound Waves, Jan./Feb. 2013, URL: http://soundwaves.usgs.gov/2013/02/meetings2.html.

Gibbs, A.E., Cochran, S.A., and Tierney, P.W., 2013, Seafloor video footage and still-frame grabs from U.S. Geological Survey cruises in Hawaiian nearshore waters: U.S. Geological Survey Data Series 735, 11 p., URL: http://pubs.usgs.gov/ds/735/.

Golden, N.E., 2013, California State Waters Map Series data catalog: U.S. Geological Survey Data Series 781, URL: http://pubs.usgs.gov/ds/781/.

Grady, A.E., Moore, L.J., Storlazzi, C.D., Elias, E., and Reidenbach, M.A., 2013, The influence of sea level rise and changes in fringing reef morphology on gradients in alongshore sediment transport: Geophysical Research Letters, v. 40 no. 12, pp. 3096–3101, doi: 10.1002/grl.50577.

Greene, H.G., Endris, C., Vallier, T., Golden, N., Cross, J., Ryan, H., Dieter, B., Niven, E., 2013, Sub-tidal benthic habitats of central San Francisco Bay and offshore Golden Gate area -- A review: Marine Geology, v. 345, pp. 31–46, doi: 10.1016/j.margeo.2013.05.001.

Haines, S., Hart, P., and Ruppel, C., 2013, New seismic data acquired over known gas hydrate occurrences in the deepwater Gulf of Mexico: Fire in the Ice, U.S. Department of Energy/National Energy Technology Laboratory Newsletter, v. 13 no. 2, pp. 3–6, URL: http://www.netl.doe.gov/technologies/oil-gas/FutureSupply/MethaneHydrates/newsletter/newsletter.htm.

Hanes, D.M., Erikson, L.H., 2013, The significance of ultra-refracted surface gravity waves on sheltered coasts, with application to San Francisco Bay: Estuarine, Coastal and Shelf Science, v. 133, pp. 129–136, doi: 10.1016/j.ecss.2013.08.022.

Hansen, J.E., Elias, E., Barnard, P.L., 2013, Changes in surfzone morphodynamics driven by multi-decadal contraction of a large ebb-tidal delta: Marine Geology, v. 345, pp. 221–234, doi: 10.1016/j.margeo.2013.07.005.

Hansen, J.E., Elias, E., List, J.H., Erikson, L.H., and Barnard, P.L., 2013, Tidally influenced alongshore circulation at an inlet-adjacent shoreline: Continental Shelf Research, v. 56, pp. 26–38, doi: 10.1016/j.csr.2013.01.017.

Hartwell, S.R., Wingfield, D.K., Allwardt, A.O., Wong, F.L., and Lightsom, F.L., 2013, Shapefile for Coastal Zone Management Program counties of the United States and its territories, 2009 (CZMP_counties_2009.shp): U.S. Geological Survey Open-File Report 2013–1284, doi: doi:10.3133/ofr20131284.

Hartwell, S.R., Finlayson, D.P., Dartnell, P., and Johnson, S.Y., 2013, Bathymetry and acoustic backscatter—Estero Bay, California: U.S. Geological Survey Open-File Report 2013–1225, doi: 10.3133/ofr20131225.

Hein, J.R., and Mizell, K., 2013, Hydrothermal systems and mineralization of volcanic arcs: Comparison of West Pacific and Mediterranean arcs: Geological Setting: Mineral Resources and ancient works of Samos and adjacent islands of the Aegean Sea, 26-30 August 2013,Karlovassi, Samos Island, Greece.

Hein, J.R., and Petersen, S., 2013, The geology of cobalt-rich ferromanganese crusts: In: Baker, E., and Beaudoin, Y. (Eds.). Deep Sea Minerals: Cobalt-rich Ferromanganese Crusts, a physical, biological, environmental, and technical review 1CSecretariat of the Pacific Community, , URL: http://www.grida.no/publications/184.

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Hein, J.R., and Petersen, S., 2013, The Geology of Manganese Nodules: In: Baker, E., and Beaudoin, Y. (Eds.). Deep Sea Minerals: Manganese Nodules, a physical, biological, environmental, and technical review 1B, Secretariat of the Pacific Community, 7–18 p., URL: http://www.grida.no/publications/184.

Hein, J.R., Mizell, K., Barnard, P.L., 2013, Sand sources and transport pathways for the San Francisco Bay coastal system, based on X-ray diffraction mineralogy: Marine Geology, v. 345, pp. 154–169, doi: 10.1016/j.margeo.2013.04.003.

Hein, J.R., Mizell, K., Koschinsky, A., Conrad, T.A., 2013, Deep-ocean mineral deposits as a source of critical metals for high- and green-technology applications: Comparison with land-based resources: Ore Geology Reviews, v. 51, pp. 1–14, doi: 10.1016/j.oregeorev.2012.12.001.

Hodson, T.O., Cochrane, G.R., Powell, R.D., 2013, Marine benthic habitat mapping of the West Arm, Glacier Bay National Park and Preserve, Alaska: U.S. Geological Survey Scientific Investigations Map, URL: http://pubs.usgs.gov/sim/3253/.

Hoeke, R.K., Storlazzi, C.D., Ridd, P.V., 2013, Drivers of circulation in a fringing coral reef embayment: A wave-flow coupled numerical modeling study of Hanalei Bay, Hawaii: Continental Shelf Research, v. 58, pp. 79–95, doi: 10.1016/j.csr.2013.03.007.

Hostettler, F.D., Lorenson, T.D., and Bekins, B.A., 2013, Petroleum Fingerprinting with Organic Markers: Environmental Forensics, v. 14 no. 4, pp. 262–277, doi: 10.1080/15275922.2013.843611.

Ishii, M., Kiser, E., and Geist, E.L., 2013, Mw 8.6 Sumatran earthquake of 11 April 2012: Rare seaward expression of oblique subduction: Geology, v. 41 no. 3, pp. 319–322, doi: 10.1130/G33783.1.

Jayko, A.S., Hart, P.E., Childs, J.R., Cormier, M.H., Ponce, D.A., Athens, N.A., and McClain, J.S., 2013, Methods and spatial extent of geophysical Investigations, Mono Lake, California, 2009 to 2011: U.S. Geological Survey Open-File Report 2013–1113, 18 p., URL: http://pubs.usgs.gov/of/2013/1113/.

Johnson, S.Y., Dartnell, P., Cochrane, G.R., Golden, N.E., Phillips, E.L., Ritchie, A.C., Greene, H.G., Krigsman, L.M., Kvitek, R.G., Dieter, B.E., Endris, C.A., Seitz, G.G., Sliter, R.W., Erdey, M.E., Gutierrez, C.I., Wong, F.L., Yoklavich, M.M., Draut, A.E., Hart, P.E., and Conrad, J.E., 2013, California State Waters Map Series—Offshore of Santa Barbara, California: In: Johnson, S.Y., and Cochran, S.A. (Eds.). U.S. Geological Survey Scientific Investigations Map 3281, 45 p., URL: http://pubs.usgs.gov/sim/3281/.

Johnson, S.Y., Dartnell, P., Cochrane, G.R., Golden, N.E., Phillips, E.L., Ritchie, A.C., Kvitek, R.G., Greene, H.G., Endris, C.A., Seitz, G.G., Sliter, R.W., Erdey, M.D., Wong, F.L., Gutierrez, C.I., Krigsman, L.M., Draut, A.E., and Hart, P.E., 2013, California State Waters Map Series—Offshore of Carpinteria, California: In: Johnson, S.Y., and Cochran, S.A. (Eds.). U.S. Geological Survey Scientific Investigations Map 3261, 42 p., URL: http://pubs.usgs.gov/sim/3261/.

Johnson, S.Y., Dartnell, P., Cochrane, G.R., Golden, N.E., Phillips, E.L., Ritchie, A.C., Kvitek, R.G., Greene, H.G., Krigsman, L.M., Endris, C.A., Seitz, G.G., Gutierrez, C.I., Sliter, R.W., Erdey, M.D., Wong, F.L., Yoklavich, M.M., Draut, A.E., and Hart, P.E., 2013, California State Waters Map Series—Offshore of Ventura, California: In: Johnson, S.Y., and Cochran, S.A. (Eds.). U.S. Geological Survey Scientific Investigations Map 3254, 42 p., URL: http://pubs.usgs.gov/sim/3254/.

Jones, B.M., Stoker, J.M., Gibbs, A.E., Grosse, G., Romanovsky, V.E., Douglas, T.A., Kinsman, N.E.M., and Richmond, B.M., 2013, Quantifying landscape change in an arctic coastal lowland using repeat airborne LiDAR: Environmental Research Letters, v. 8 no. 4, doi: 10.1088/1748-9326/8/4/045025.

Jones, B.M., Stoker, Jm>, Gibbs, A.E., Grosse, G., Romanovsky, V.E., Douglas, T.A., Kinsman, N.E.M., and Richmond, B.M., 2013, Quantifying landscape change in an arctic coastal lowland using repeat airborne LiDAR: Environmental Research Letters, v. 8 no. 4, 045025 p., doi: 10.1088/1748-9326/8/4/045025.

Jones, C.A., Jaffe, B.E., 2013, Influence of history and environment on the sediment dynamics of intertidal flats: Marine Geology, v. 345, pp. 294–303, doi: 10.1016/j.margeo.2013.05.011.

Kayen, R., Moss, R., Thompson, E., Seed, R., Cetin, K., Kiureghian, A., Tanaka, Y., Tokimatsu, K., 2013, Shear-Wave Velocity–Based Probabilistic and Deterministic Assessment of Seismic Soil Liquefaction Potential: Journal of Geotechnical and Geoenvironmental Engineering, v. 139 no. 3, pp. 407–419, doi: 10.1061/(Asce)Gt.1943-5606.0000743.

Kirby, S., Scholl, D., von Huene, R., and Wells, R., 2013, Alaska earthquake source for the SAFRR tsunami scenario, chap. B in Ross, S.L., and Jones, L.M., eds., The SAFRR (Science Application for Risk Reduction) Tsunami Scenario: U.S. Geological Survey Open-File Report 2013–1170, 40 p., URL: http://pubs.usgs.gov/of/2013/1170/b/.

Lamborg, C.H., Swarr, G., Hughen, K., Jones, R.J., Birdwhistell, S., Furby, K., Murty, S.A., Prouty, N., Tseng, C.-M., 2013, Determination of low-level mercury in coralline aragonite by calcination-isotope dilution-inductively coupled plasma-mass spectrometry and its application to Diploria specimens from Castle Harbour, Bermuda: Geochimica et Cosmochimica Acta, v. 109, pp. 27–37, doi: 10.1016/j.gca.2013.01.026.

Lee, H.J., Field, M.E., and Hampton, M.A., 2013, Workshop on Submarine Landslide Processes: Landslides in Central California: San Francisco and Central California, July 20–29, 1989, American Geophysical Union, pp. 66–69, doi: 10.1029/FT381p0066.

Li, J., Okin, G.S., Herrick, J.E., Belnap, J., Miller, M.E., Vest, K., and Draut, A.E., 2013, Evaluation of a new model of aeolian transport in the presence of vegetation: Journal of Geophysical Research F: Earth Surface, v. 118 no. 1, pp. 288–306, doi: 10.1002/jgrf.20040.

McGann, M., Erikson, L., Wan, E., Powell, C., Maddocks, R.F., 2013, Distribution of biologic, anthropogenic, and volcanic constituents as a proxy for sediment transport in the San Francisco Bay Coastal System: Marine Geology, v. 345, pp. 113–142, doi: 10.1016/j.margeo.2013.05.006.

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Muiños, S.B., Hein, J.R., Frank, M., Monteiro, J.H., Gaspar, L., Conrad, T., Pereira, H.G., and Abrantes, F., 2013, Deep-sea Fe-Mn Crusts from the Northeast Atlantic Ocean: Composition and Resource Considerations: Marine Georesources & Geotechnology, v. 31 no. 1, pp. 40–70, doi: 10.1080/1064119x.2012.661215.

Noble, M.A., Rosenberger, K.J., Paulson, A.J., and Gartner, A.L., 2013, Circulation exchange patterns in Sinclair Inlet, Washington: U.S. Geological Survey Open-File Report 2013-1117, 40 p., URL: http://pubs.usgs.gov/of/2013/1117/.

Paull, C.K., Caress, D.W., Lundsten, E., Gwiazda, R., Anderson, K., McGann, M., Conrad, J., Edwards, B., Sumner, E.J., 2013, Anatomy of the La Jolla Submarine Canyon system; offshore southern California: Marine Geology, v. 335, pp. 16–34, doi: 10.1016/j.margeo.2012.10.003.

Petersen, S., and Hein, J.R., 2013, The Geology of Sea-Floor Massive Sulphides: In: Baker, E., and Beaudoin, Y. (Eds.). Deep Sea Minerals: Sea-Floor Massive Sulphides; A physical, biological, environmental, and technical review 1A, Secretariat of the Pacific Community, 7–18 p.

Polgári, M., Hein, J.R., Németh, T., Pál-Molnár, E., Vigh, T., 2013, Celadonite and smectite formation in the Úrkút Mn-carbonate ore deposit (Hungary): Sedimentary Geology, v. 294, pp. 157–163, doi: 10.1016/j.sedgeo.2013.05.017.

Porter, K., Jones, L., Ross, S., Borrero, J., Bwarie, J., Dykstra, D., Geist, E.L., Johnson, L., Kirby, S., Long, K., Lynett, P., Miller, K., Mortensen, C., Perry, S., Plumlee, G., Real, C., Ritchie, L., Scawthorn, C., Thio, H.K., Wein, A., Whitmore, P., Wilson, R., Wood, N., 2013, The SAFRR Tsunami Scenario: American Society of Civil Engineers, pp. 1512–1521 doi: 10.1061/9780784413067.155.

Prouty, N.G., Goodkin, N.F., Jones, R., Lamborg, C.H., Storlazzi, C.D., and Hughen, K.A., 2013, Environmental assessment of metal exposure to corals living in Castle Harbour, Bermuda: Marine Chemistry, v. 154, pp. 55–66, doi: 10.1016/j.marchem.2013.05.002.

Reece, R.S., Gulick, S.P.S., Christeson, G.L., Horton, B.K., van Avendonk, H., Barth, G., 2013, The role of farfield tectonic stress in oceanic intraplate deformation, Gulf of Alaska: Journal of Geophysical Research: Solid Earth, J. Geophys. Res. Solid Earth, v. 118 no. 5, pp. 1862–1872, doi: 10.1002/jgrb.50177.

Rippy, M.A., Franks, P.J.S., Feddersen, F., Guza, R.T., and Warrick, J.A., 2013, Beach Nourishment Impacts on Bacteriological Water Quality and Phytoplankton Bloom Dynamics: Environmental Science & Technology, v. 47 no. 12, doi: 10.1021/es400572k.

Rogers, J.S., Monismith, S.G., Feddersen, F., and Storlazzi, C.D., 2013, Hydrodynamics of spur and groove formations on a coral reef: Hydrodynamics of Reef Spur and Grooves: Journal of Geophysical Research: Oceans, v. 118 no. 6, pp. 3059–3073, doi: 10.1002/jgrc.20225.

Rosenbauer, R.J., Foxgrover, A.C., Hein, J.R., and Swarzenski, P.W., 2013, A Sr-Nd isotopic study of sand-sized sediment provenance and transport for the San Francisco Bay coastal system: Marine Geology, v. 345, pp. 143–153, doi: 10.1016/j.margeo.2013.01.002.

Ross, S.L., and Jones, L.M., 2013, The SAFRR (Science Application for Risk Reduction) Tsunami Scenario: U.S. Geological Survey Open-File Report 2013-1170, 897 p., URL: http://pubs.usgs.gov/of/2013/1170/.

Ross, S.L., Jones, L.M., Miller, K., Porter, K.A., Wein, A., Wilson, R.I., Bahng, B., Barberopoulou, A., Borrero, J.C., Brosnan, D.M., Bwarie, J.T., Geist, E.L., Johnson, L.A., Kirby, S.H., Knight, W.R., Long, K., Lynett, P., Mortensen, C.E., Nicolsky, D.J., Perry, S.C., Plumlee, G.S., Real, C.R., Ryan, K., Suleimani, E., Thio, H., Titov, V.V., Whitmore, P.M., and Wood, N.J., 2013, SAFRR (Science Application for Risk Reduction) Tsunami Scenario—Executive Summary and Introduction: U.S. Geological Survey Open-File Report 2013–1170–A.

Ross, S.L., Jones, L.M., Miller, K., Porter, K.A., Wein, A., Wilson, R.I., Bahng, B., Barberopoulou, A., Borrero, J.C., Brosnan, D.M., Bwarie, J.T., Geist, E.L., Johnson, L.A., Kirby, S.H., Knight, W.R., Long, K., Lynett, P., Mortensen, C.E., Nicolsky, D.J., Perry, S.C., Plumlee, G.S., Real, C.R., Ryan, K., Suleimani, E., Thio, H., Titov, V.V., Whitmore, P.M., and Wood, N.J., 2013, The SAFRR tsunami scenario--Improving resilience for California: U.S. Geological Survey Fact Sheet 2013-3081, 4 p., URL: http://pubs.usgs.gov/fs/2013/3081/.

Rubin, D.M., Rubin, A.M., 2013, Origin and lateral migration of linear dunes in the Qaidam Basin of NW China revealed by dune sediments, internal structures, and optically stimulated luminescence ages, with implications for linear dunes on Titan: Discussion: Geological Society of America Bulletin, v. 125 no. 11-12, pp. 1943–1946, doi: 10.1130/B30780.1.

Schreppel, H.A., Degnan, C.H, Dadisman, S.V., and Metzger, D.R., 2013, Archive of U.S. Geological Survey Selected Single-Beam Bathymetry Datasets, 1969–2000: U. S. Geological Survey Data Series 757, URL: http://pubs.usgs.gov/ds/757/.

Sliter, R.J., S.Y., Watt, J.T., Scheirer, D.S., Allwardt, P. and Triezenberg, P.J., 2013, High-resolution seismic-reflection and marine-magnetic data from offshore central California—San Gregorio to Point Sur: U.S. Geological Survey Open-File Report 2013-1071, URL: http://pubs.usgs.gov/of/2013/1071/.

Storlazzi, C.D., Berkowitz, P., Reynolds, M.H., and Logan, J.B., 2013, Forecasting the impact of storm waves and sea-level rise on Midway Atoll and Laysan Island within the Papahānaumokuākea Marine National Monument—A comparison of passive versus dynamic inundation models: U.S. Geological Survey Open-File Report 2013–1069, 78 p., URL: http://pubs.usgs.gov/of/2013/1069/.

Storlazzi, C.D., Field, M.E., Cheriton, O.M., Presto, M.K., and Logan, J.B., 2013, Rapid fluctuations in flow and water-column properties in Asan Bay, Guam—Implications for selective resilience of coral reefs in warming seas: Coral Reefs, v. 32, 949–961 p., doi: 10.1007/s00338-013-1061-x.

Storlazzi, C.D., Field, M.E., Presto, M.K., Swarzenski, P.W., Logan, J.B., Reiss, T.E., Elfers, T.C., Cochran, S.A., Torresan, M.E., and Chezar, H., 2013, Coastal circulation and sediment dynamics in Pelekane and Kawaihae Bays, Hawaii—measurements of waves, current, temperature, salinity, turbidity, and geochronology: November 2010-March 2011: U.S. Geological Survey Open-File Report 2012-1264, 102 p., URL: http://pubs.usgs.gov/of/2012/1264/.

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Storlazzi, C.D., Fregoso, T.A., Figurski, J.D., Freiwald, J., Lonhart, S.I., and Finlayson, D.P., 2013, Burial and exhumation of temperate bedrock reefs as elucidated by repetitive high-resolution sea floor sonar surveys: Spatial patterns and impacts to species' richness and diversity: Continental Shelf Research, v. 55, pp. 40–51, doi: 10.1016/j.csr.2013.01.013.

Storlazzi, C.D., Golden, N.E., and Gibbons, H., 2013, Seafloor off Lighthouse Point Park, Santa Cruz, California: General Information Product 153, doi: 10.3133/gip153.

Storlazzi, C.D., Golden, N.E., and Gibbons, H., 2013, Seafloor off Natural Bridges State Beach, Santa Cruz, California: General Information Product 154, doi: 10.3133/gip154.

Storlazzi, C.D., Golden, N.E., and Gibbons, H., 2013, Seafloor off Pleasure Point, Santa Cruz County, California: General Information Product 152, doi: 10.3133/gip152.

Swarzenski, P., Baskaran, M., Rosenbauer, R., Edwards, B., and Land, M., 2013, A Combined Radio- and Stable-Isotopic Study of a California Coastal Aquifer System: Water, v. 5 no. 2, pp. 480–504, doi: 10.3390/w5020480.

Swarzenski, P.W., Dulaiova, H., Dailer, M.L., Glenn, C.R., Smith, C.G., and Storlazzi, C.D., 2013, A Geochemical and Geophysical Assessment of Coastal Groundwater Discharge at Select Sites in Maui and Oʻahu, Hawaiʻi: In: Wetzelhuetter, C. (Ed.). Groundwater in the Coastal Zones of Asia-Pacific 7(Coastal Research Library), Springer Netherlands, pp. 27–46, doi: 10.1007/978-94-007-5648-9_3.

Takesue, R.K., and Jaffe, B.E., 2013, Sediment geochemistry of Corte Madera Marsh, San Francisco Bay, California--Have local inputs changed, 1830-2010? U.S. Geological Survey Open-File Report 2013-1042, 23 p., URL: http://pubs.usgs.gov/of/2013/1042/.

ten Brink, U.S., Chaytor, J.D., Brothers, D.S., and Geist, E.L., 2013, Geological perspective on submarine landslide tsunami probability [extended abs.], in Nicholson, T.J., and Reed, W.A., 2013, Proceedings of the Workshop on Probabilistic Flood Hazard Assessment (PFHA): U.S. Nuclear Regulatory Commission, pp. 6–13 – 6–17 URL: http://www.nrc.gov/reading-rm/doc-collections/nuregs/conference/cp0302/.

The SAFRR Tsunami Modeling Working Group,, 2013, Modeling for the SAFRR Tsunami Scenario—Generation, propagation, inundation, and currents in ports and harbors, chap. D, in Ross, S.L., and Jones, L.M., The SAFRR (Science Application for Risk Reduction) Tsunami Scenario: U.S. Geological Survey Open-File Report 2013-1170, 136 p., URL: http://pubs.usgs.gov/of/2013/1170/d/.

van der Wegen, M., Jaffe, B.E., 2013, Does centennial morphodynamic evolution lead to higher channel efficiency in San Pablo Bay, California? Marine Geology, v. 345, pp. 254–265, doi: 10.1016/j.margeo.2013.06.020.

van der Wegen, M., Jaffe, B.E., 2013, Towards a probabilistic assessment of process-based, morphodynamic models: Coastal Engineering, v. 75, pp. 52–63, doi: 10.1016/j.coastaleng.2013.01.009.

Warrick, J.A., 2013, Dispersal of Fine Sediment in Nearshore Coastal Waters: Journal of Coastal Research, v. 288, pp. 579–596, doi: 10.2112/Jcoastres-D-12-00087.1.

Warrick, J.A., and Storlazzi, C.D., 2013, Fine-grained sediment dispersal along the California coast: U.S. Geological Survey Fact Sheet 2013-3023, 4 p., URL: http://pubs.usgs.gov/fs/2013/3023/.

Warrick, J.A., Madej, M.A., Goñi, M.A., Wheatcroft, R.A., 2013, Trends in the suspended-sediment yields of coastal rivers of northern California, 1955-2010: Journal of Hydrology, v. 489, pp. 108–123, doi: 10.1016/j.jhydrol.2013.02.041.

Warrick, J.A., Simms, A.R., Ritchie, A., Steel, E., Dartnell, P., Conrad, J.E., and Finlayson, D.P., 2013, Hyperpycnal plume-derived fans in the Santa Barbara Channel, California: Geophysical Research Letters, v. 40 no. 10, pp. 2081–2086, doi: 10.1002/grl.50488.

Williams, B.K., Wingard, G.L., Brewer, G., Cloern, J.E., Gelfenbaum, G., Jacobson, R.B., Kershner, J.L., McGuire, A.D., Nichols, J.D., Shapiro, C.D., van Riper III, C., and White, R.P., 2013, U.S. Geological Survey Ecosystems Science Strategy: Advancing discovery and application through collaboration: U.S. Geological Survey Circular 1383-C, 43 p., URL: http://pubs.usgs.gov/circ/1383c/.

Wong, F.L., Woodrow, D.L., McGann, M., 2013, Heavy mineral analysis for assessing the provenance of sandy sediment in the San Francisco Bay Coastal System: Marine Geology, v. 345, pp. 170–180, doi: 10.1016/j.margeo.2013.05.012.

Xu, J.P., Barry, J.P., Paull, C.K., 2013, Small-scale turbidity currents in a big submarine canyon: Geology, v. 41 no. 2, pp. 143–146, doi: 10.1130/G33727.1.

Zoback, M.L., Geist, E.L., Pallister, J., Hill, D., Young, S., and W. McCausland, 2013, Advances in natural hazard science and assessment, 1963-2013, in The Impact of the Geological Sciences on Society, edited by M. E. Bickford,: Geological Society of America Special Paper 501, Boulder, CO, pp. 81–154.

2012

Anderson, T., Rosenberger, K.J., and Gartner, A.L., 2012, Reformatted data sets used in the Cooperative LACSD/U.S. Geological Survey Palos Verdes Flow Study, 2000-2008: U.S. Geological Survey Open-File Report 2010-1253, 45 p., URL: http://pubs.usgs.gov/of/2010/1253/.

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Apotsos, A., Gelfenbaum, G., Jaffe, B., 2012, Time-dependent onshore tsunami response: Coastal Engineering, v. 64, pp. 73–86, doi: 10.1016/j.coastaleng.2012.01.001.

Atwater, B.F., ten Brink, U.S., Buckley, M., Halley, R.S., Jaffe, B.E., Lopez-Venegas, A.M., Reinhardt, E.G., Tuttle, M.P., Watt, S., Wei, Y., 2012, Geomorphic and stratigraphic evidence for an unusual tsunami or storm a few centuries ago at Anegada, British Virgin Islands: Natural Hazards, v. 63 no. 1, pp. 51–84, doi: 10.1007/s11069-010-9622-6.

Atwater, B.F., ten Brink, U.S., Buckley, M., Halley, R.S., Jaffe, B.E., López-Venegas, A.M., Reinhardt, E.G., Tuttle, M.P., Watt, S., Wei, Y., 2012, Geomorphic and stratigraphic evidence for an unusual tsunami or storm a few centuries ago at Anegada, British Virgin Islands: Natural Hazards, v. 63 no. 1, pp. 51–84, doi: 10.1007/s11069-010-9622-6.

Barnard, P.L., Erikson, L.H., Rubin, D.M., Dartnell, P., and Kvitek, R.G., 2012, Analyzing bedforms mapped using multibeam sonar to determine regional bedload sediment transport patterns in the San Francisco Bay coastal system: Sedimentology: In: Li, M.Z., Sherwood, C.R., and Hill, P.R. (Eds.), Sediments, Morphology and Sedimentary Processes on Continental Shelves. Advances in technologies, research and applications: Special Publication 44 of the International Association of Sedimentologists (IAS), pp. 273–294.

Barnard, P.L., Hansen, J.E., Erikson, L.H., 2012, Synthesis Study of an Erosion Hot Spot, Ocean Beach, California: Journal of Coastal Research, v. 283, pp. 903–922, doi: 10.2112/Jcoastres-D-11-00212.1.

Barnard, P.L., Hubbard, D.M., Dugan, J.E., 2012, Beach response dynamics of a littoral cell using a 17-year single-point time series of sand thickness: Geomorphology, v. 139-140, pp. 588–598, doi: 10.1016/j.geomorph.2011.12.023.

Berkowitz, P., Storlazzi, C.D., Courtot, K.N., Krause, C.M., and Reynolds, M.H., 2012, Sea-level rise and wave-driven inundation models for Laysan Island, Chapter 2 of Reynolds, M.H., Berkowitz, P., Courtot, K.N., and Krause, C.M., eds., Predicting sea-level rise vulnerability of terrestrial habitat and wildlife of the Northwestern Hawaiian Islands: U.S. Geological Survey Open-File Report 2012-1182, 72126 p., URL: http://pubs.usgs.gov/of/2012/1182/.

Briggs, B.R., Inagaki, F., Morono, Y., Futagami, T., Huguet, C., Rosell-Mele, A., Lorenson, T.D., Colwell, F.S., 2012, Bacterial dominance in subseafloor sediments characterized by methane hydrates: FEMS Microbiology Ecology, v. 81 no. 1, pp. 88–98, doi: 10.1111/j.1574-6941.2012.01311.x.

Brothers, L.L., Hart, P.E., Ruppel, C.D., 2012, Minimum distribution of subsea ice-bearing permafrost on the U.S. Beaufort Sea continental shelf: US BEAUFORT SEA SUBSEA PERMAFROST: Geophysical Research Letters, v. 39 no. 15, n/a-n/a p., doi: 10.1029/2012gl052222.

Buckley, M.L., Wei, Y., Jaffe, B.E., Watt, S.G., 2012, Inverse modeling of velocities and inferred cause of overwash that emplaced inland fields of boulders at Anegada, British Virgin Islands: Natural Hazards, v. 63 no. 1, pp. 133–149, doi: 10.1007/s11069-011-9725-8.

Buscombe, D., Rubin, D.M., 2012, Advances in the simulation and automated measurement of well-sorted granular material: 1. Simulation: Journal of Geophysical Research, v. 117 no. F2, doi: 10.1029/2011jf001974.

Buscombe, D., Rubin, D.M., 2012, Advances in the simulation and automated measurement of well-sorted granular material: 2. Direct measures of particle properties: Journal of Geophysical Research, v. 117 no. F2, doi: 10.1029/2011jf001975.

Calderon, K., Forde, A.S., Dadisman, S.V., Wiese, D.S., and Phelps, D.C., 2012, Archive of digital boomer subbottom profile data collected in the Atlantic Ocean offshore northeast Florida during USGS cruises 03FGS01 and 03FGS02 in September and October of 2003: U. S. Geological Survey Data Series 670, URL: http://pubs.usgs.gov/ds/670/.

Childs, J.R., Triezenberg, P.J., and Danforth, W.W., 2012, 2008 Joint United States-Canadian program to explore the limits of the Extended Continental Shelf aboard the U.S. Coast Guard cutter Healy—Cruise HLY0806: U.S. Geological Survey Open-File Report 2012-1210, 15 p., URL: http://pubs.usgs.gov/of/2012/1210/.

Childs, J.R., Triezenberg, P.J., and Danforth, W.W., 2012, 2008 Joint United States-Canadian program to explore the limits of the Extended Continental Shelf aboard the U.S. Coast Guard cutter Healy—Cruise HLY0806: U. S. Geological Survey Open-File Report 2012-1210, 15 p., URL: http://pubs.usgs.gov/of/2012/1210/.

Conaway, C.H., Swarzenski, P.W., and Cohen, A.S., 2012, Recent paleorecords document rising mercury contamination in Lake Tanganyika: Applied Geochemistry, v. 27 no. 1, pp. 352–359, doi: 10.1016/j.apgeochem.2011.11.005.

Dartnell, P., Finlayson, D.P., Ritchie, A.C., Cochrane, G.R., and Erdey, M.D., 2012, Bathymetry and acoustic backscatter—Outer mainland shelf, eastern Santa Barbara Channel, California: U.S. Geological Survey Data Series 702, URL: http://pubs.usgs.gov/ds/702/.

Dimova, N.T., Swarzenski, P.W., Dulaiova, H., and Glenn, C.R., 2012, Utilizing multichannel electrical resistivity methods to examine the dynamics of the fresh water-seawater interface in two Hawaiian groundwater systems: Journal of Geophysical Research, v. 117 no. C2, doi: 10.1029/2011jc007509.

Draut, A.E., 2012, Effects of river regulation on aeolian landscapes, Colorado River, southwestern USA: Journal of Geophysical Research, v. 117 no. F2, doi: 10.1029/2011jf002329.

Draut, A.E., Redsteer, M.H., and Amoroso, L., 2012, Vegetation, substrate, and aeolian sand transport at Teesto Wash, Navajo Nation, 2009–12: U.S. Geological Survey Scientific Investigations Report 2012-5095, 78 p., URL: http://pubs.usgs.gov/sir/2012/5095/.

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Draut, A.E., and Clift, P.D., 2012, Basins in ARC-Continent Collisions: In: Busby, C., Azor, A. (Eds.). Tectonics of Sedimentary Basins, John Wiley & Sons, Ltd, Chichester, UK, pp. 347–368, doi: 10.1002/9781444347166.ch17.

Edgar, L.A., Grotzinger, J.P., Hayes, A.G., Rubin, D.M., Squyres, S.W., Bell, J.F, and Herkenhoff, K.E., 2012, Stratigraphic architecture of bedrock reference section, Victoria Crater, Meridiani Planum, Mars: Sedimentary Geology of Mars: SEPM Special Publication No. 102, pp. 195–209.

Elias, E.P.L., Gelfenbaum, G., and Van der Westhuysen, A.J., 2012, Validation of a coupled wave-flow model in a high-energy setting: The mouth of the Columbia River: Journal of Geophysical Research: Oceans, v. 117 no. C9, doi: 10.1029/2012jc008105.

Erikson, L.H., Gibbs, A.E., Richmond, B.M., Storlazzi, C.D., and Jones, B.M., 2012, Modeling arctic barrier island-lagoon system response to projected arctic warming: Arctic Landscape Conservation Cooperative Progress Report, URL: http://arcticlcc.org/projects/geophysical/barrier-island-lagoon-systems/.

Fletcher, C.H., Romine, B.M., Genz, A.S., Barbee, M.M., Dyer, M., Anderson, T.R., Lim, S.C., Vitousek, S., Bochicchio, C., and Richmond, B.M., 2012, National assessment of shoreline change: Historical shoreline change in the Hawaiian Islands: Open-File Report 2011-1051, 55 p., URL: http://pubs.usgs.gov/of/2011/1051.

Foxgrover, A.C., and Barnard, P.L., 2012, A seamless, high-resolution digital elevation model (DEM) of the north-central California coast: U.S. Geological Survey Data Series 684, 11 p., URL: http://pubs.usgs.gov/ds/684/.

Ganguli, P.M., Conaway, C.H., Swarzenski, P.W., Izbicki, J.A., and Flegal, A.R., 2012, Mercury Speciation and Transport via Submarine Groundwater Discharge at a Southern California Coastal Lagoon System: Environmental Science & Technology, v. 46 no. 3, pp. 1480–1488, doi: 10.1021/es202783u.

Garcia, S., Rosenbauer, R.J., Palandri, J., and Maroto-Valer, M.M., 2012, Sequestration of non-pure carbon dioxide streams in iron oxyhydroxide-containing saline repositories: International Journal of Greenhouse Gas Control, v. 7, pp. 89–97, doi: 10.1016/j.ijggc.2011.12.004.

García-García, A., Schoolmeester, T., Orange, D., Calafat, A., Fabres, J., Grossman, E., Field, M., Lorenson, T.D., Levey, M., and Sansoucy, M., 2012, Recent Sedimentary Processes in the Cap de Creus Canyon Head and Adjacent Continental Shelf, NE Spain: Evidence from Multibeam Bathymetry, Sub-Bottom Profiles and Coring: In: Li, M.Z., Sherwood, C.R., and Hill, P.R. (Eds.). Sediments, Morphology and Sedimentary Processes on Continental Shelves: Advances in Technologies, Research, and Applications, John Wiley & Sons, Ltd, pp. 71–97, doi: 10.1002/9781118311172.ch4.

Geist, E.L., 2012, Chapter Two – Phenomenology of Tsunamis II: Scaling, Event Statistics, and Inter-Event Triggering: , Advances in Geophysics. Advances in Geophysics 53, Elsevier, , pp. 35–92, doi: 10.1016/B978-0-12-380938-4.00002-1.

Geist, E.L., 2012, Near-field tsunami edge waves and complex earthquake rupture: Pure and Applied Geophysics, v. 170 no. 9-10, pp. 1475–1491, doi: 10.1007/s00024-012-0491-7.

George, D.A., Gelfenbaum, G., and Stevens, A.W., 2012, Modeling the Hydrodynamic and Morphologic Response of an Estuary Restoration: Estuaries and Coasts, v. 35 no. 6, pp. 1510–1529, doi: 10.1007/s12237-012-9541-8.

Gibbs, A.E., and Cochran, S.A., 2012, Seafloor Morphology and Coral Habitat Variability in a Volcanic Environment: Kaloko–Honokohau National Historical Park, Hawaii, USA A2 - Harris, Peter T: In: Baker, E.K. (Ed.), Seafloor Geomorphology as Benthic Habitat. Elsevier, London, pp. 409–423 doi: 10.1016/B978-0-12-385140-6.00028-1.

Goff, J., Chagué-Goff, C., Nichol, S., Jaffe, B., Dominey-Howes, D., 2012, Progress in palaeotsunami research: Sedimentary Geology, v. 243-244, pp. 70–88, doi: 10.1016/j.sedgeo.2011.11.002.

Goldfinger, C., Nelson, C.H., et al., 2012, Turbidite event history—Methods and implications for Holocene paleoseismicity of the Cascadia subduction zone: U.S. Geological Survey Professional Paper 1661–F, 170 p., URL: http://pubs.usgs.gov/pp/pp1661f/.

Goldfinger, C., Nelson, C.H., Morey, A.E., Johnson, J.E., Patton, J.R., Karabanov, E., Gutierrez-Pastor, J., Eriksson, A.T., Gracia, E., Dunhill, G., Enkin, R.J., Dallimore, A., and Vallier, T., 2012, Turbidite event history--Methods and implications for Holocene paleoseismicity of the Cascadia subduction zone: In: Kayen, R. (Ed.). U.S. Geological Survey Professional Paper 1661F, 184 p., URL: http://pubs.usgs.gov/pp/pp1661f/.

Goto, K., Chagué-Goff, C., Goff, J., Jaffe, B., 2012, The future of tsunami research following the 2011 Tohoku-oki event: Sedimentary Geology, v. 282, pp. 1–13, doi: 10.1016/j.sedgeo.2012.08.003.

Guerry, A.D., Ruckelshaus, M.H., Arkema, K.K., Bernhardt, J.R., Guannel, G., Kim, C.-K., Marsik, M., Papenfus, M., Toft, J.E., Verutes, G., Wood, S.A., Beck, M., Chan, F., Chan, K.M.A., Gelfenbaum, G., Gold, B.D., Halpern, B.S., Labiosa, W.B., Lester, S.E., Levin, P.S., McField, M., Pinsky, M.L., Plummer, M., Polasky, S., Ruggiero, P., Sutherland, D.A., Tallis, H., Day, A., Spencer, J., 2012, Modeling benefits from nature: using ecosystem services to inform coastal and marine spatial planning: International Journal of Biodiversity Science, Ecosystem Services & Management, v. 8 no. 1-2, pp. 107–121, doi: 10.1080/21513732.2011.647835.

Hein, J.R., Conrad, T.A., Frank, M., Christl, M., Sager, W.W., 2012, Copper-nickel-rich, amalgamated ferromanganese crust-nodule deposits from Shatsky Rise, NW Pacific: SHATSKY RISE Cu-RICH Fe-Mn CRUSTS: Geochemistry, Geophysics, Geosystems, v. 13 no. 10, doi: 10.1029/2012gc004286.

Hein, J., 2012, Prospects for Rare Earth Elements From Marine Minerals: Briefing Paper 02/12, International Seabed Authority sensitization seminar, May 2012.

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Izbicki, J.A., Swarzenski, P.W., Burton, C.A., Van De Werfhorst, L., Holden, P.A., and Dubinsky, E.A., 2012, Sources of Fecal Indicator Bacteria to Groundwater, Malibu Lagoon and the Near-Shore Ocean, Malibu, California, USA: Annals of Environmental Science, v. 6.

Jaffe, B.E., Goto, K., Sugawara, D., Richmond, B.M., Fujino, S., Nishimura, Y., 2012, Flow speed estimated by inverse modeling of sandy tsunami deposits: results from the 11 March 2011 tsunami on the coastal plain near the Sendai Airport, Honshu, Japan: Sedimentary Geology, v. 282, pp. 90–109, doi: 10.1016/j.sedgeo.2012.09.002.

Jaffe, B.E., Watt, Steve, and Buckley, Mark, 2012, Inland fields of dispersed cobbles and boulders as evidence for a tsunami on Anegada, British Virgin Islands: Natural Hazards, v. 63 no. 11, pp. 119–131, doi: 10.1007/s11069-011-9848-y.

Johnson, S.Y., Dartnell, P., Cochrane, G.R., Golden, N.E., Phillips, E.L., Ritchie, A.C., Kvitek, R.G., Greene, H.G., Krigsman, L.M., Endris, C.A., Clahan, K.B., Sliter, R.W., Wong, F.L., Yoklavich, M.M., and Normark, W.R.(S.Y.J., ed.), 2012, California State Waters Map Series--Hueneme Canyon and vicinity, California: U.S. Geological Survey Scientific Investigations Map 3225, 41 p.

Johnson, S.Y., Watt, J.T., 2012, Influence of fault trend, bends, and convergence on shallow structure and geomorphology of the Hosgri strike-slip fault, offshore central California: Geosphere, v. 8 no. 6, pp. 1632–1656, doi: 10.1130/Ges00830.1.

Kinsman, N., and Xu, J.P., 2012, Fluorescent tracer experiment on Holiday Beach near Mugu Canyon: U.S. Geological Survey Open-File Report 2012–1131, URL: http://pubs.usgs.gov/of/2012/1131/.

Kvenvolden, K.A., 2012, Fifty years of IMOG (International Meetings on Organic Geochemistry): Organic Geochemistry, v. 53, pp. 5–7, doi: 10.1016/j.orggeochem.2012.09.004.

Lacy, J.R., Rubin, D.M., Buscombe, D., 2012, Currents, drag, and sediment transport induced by a tsunami: TSUNAMI CURRENTS: Journal of Geophysical Research: Oceans, v. 117 no. C9, n/a-n/a p., doi: 10.1029/2012jc007954.

Langenheim, V.E., Watt, J.T., and Denton, K.M., 2012, Magnetic map of the Irish Hills and surrounding areas, San Luis Obispo County, central California: Open-File Report, URL: http://pubs.usgs.gov/of/2012/1080/.

Ledezma, C., Hutchinson, T., Ashford, S.A., Moss, R., Arduino, P., Bray, J.D., Olson, S., Hashash, Y.M.A., Verdugo, R., Frost, D., Kayen, R., and Rollins, K., 2012, Effects of Ground Failure on Bridges, Roads, and Railroads: Earthquake Spectra, v. 28 no. S1, S119-S143 p., doi: 10.1193/1.4000024.

Logan, J., 2012, New Video Shows a Virtual Fly-Through Along the Lower Elwha River, Washington, Using Recently Acquired Ground-Based Lidar Data: U. S. Geological Survey Sound Waves, Mar/Apr. 2012, URL: http://soundwaves.usgs.gov/2012/04/pubs.html.

McGann, M., Grossman, E.E., Takesue, R.K., Penttila, D., Walsh, J.P., Corbett, R., 2012, Arrival and Expansion of the Invasive Foraminifera Trochammina hadai Uchio in Padilla Bay, Washington: Northwest Science, v. 86 no. 1, pp. 9–26, doi: 10.3955/046.086.0102.

McGlue, M.M., Ellis, G.S., Cohen, A.S., and Swarzenski, P.W., 2012, Playa-lake sedimentation and organic matter accumulation in an Andean piggyback basin: the recent record from the Cuenca de Pozuelos, North-west Argentina: Organic sedimentation in piggyback playa lakes: Sedimentology, v. 59 no. 4, pp. 1237–1256, doi: 10.1111/j.1365-3091.2011.01304.x.

McGlue, M.M., Silva, A., Corradini, F.A., Zani, H., Trees, M.A., Ellis, G.S., Parolin, M., Swarzenski, P.W., Cohen, A.S., and Assine, M.L., 2012, Erratum to: Limnogeology in Brazil's ''forgotten wilderness'': a synthesis from the large floodplain lakes of the Pantanal: Journal of Paleolimnology, v. 47 no. 1, pp. 165–166, doi: 10.1007/s10933-011-9545-6.

McGlue, M.M., Silva, A., Corradini, F.A., Zani, H., Trees, M.A., Ellis, G.S., Parolin, M., Swarzenski, P.W., Cohen, A.S., and Assine, M.L., 2012, Erratum to: Limnogeology in Brazil’s ‘‘forgotten wilderness’’: a synthesis from the large floodplain lakes of the Pantanal: Journal of Paleolimnology, v. 47 no. 1, pp. 165–166, doi: 10.1007/s10933-011-9545-6.

Merrifield, M.A., and 27 others, 2012, Sea Level and Coastal Inundation on Pacific Islands; In, Marra, J.J., Keener, V.W., Finucane, M.L., Spooner, D., Smith, M.H. (eds.), Climate Change and Pacific Islands—Indicators and Impacts: Report for The 2012 Pacific Islands Regional Climate Assessment (PIRCA), Honolulu, Hawai'i, USA, pp. 58–79.

Miller, I.M., and Warrick, J.A., 2012, Measuring sediment transport and bed disturbance with tracers on a mixed beach: Marine Geology, v. 299–302, pp. 1–17, doi: 10.1016/j.margeo.2012.01.002.

Mitra, S., Kimmel, D.G., Snyder, J., Scalise, K., McGlaughon, B.D., Roman, M.R., Jahn, G.L., Pierson, J.J., Brandt, S.B., Montoya, J.P., Rosenbauer, R.J., Lorenson, T.D., Wong, F.L., and Campbell, P.L., 2012, Macondo-1 well oil-derived polycyclic aromatic hydrocarbons in mesozooplankton from the northern Gulf of Mexico: Geophysical Research Letters, v. 39 no. 1, L01605 p., doi: 10.1029/2011GL049505.

Noble, M.A., Rosenberger, K.J., Rosenfeld, L.K., Robertson, G.L., 2012, Temporal and spatial patterns in wind stress and wind stress curl over the central Southern California Bight: Continental Shelf Research, v. 38, pp. 98–109, doi: 10.1016/j.csr.2012.03.006.

Null, K.A., Dimova, N.T., Knee, K.L., Esser, B.K., Swarzenski, P.W., Singleton, M.J., Stacey, M., and Paytan, A., 2012, Submarine Groundwater Discharge-Derived Nutrient Loads to San Francisco Bay: Implications to Future Ecosystem Changes: Estuaries and Coasts, v. 35 no. 5, pp. 1299–1315, doi: 10.1007/s12237-012-9526-7.

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Parker, B., and 39 others, 2012, Marine, Freshwater, and Terrestrial Ecosystems on Pacific Islands; In, Marra, J.J., Keener, V.W., Finucane, M.L., Spooner, D., Smith, M.H. (eds.), Climate Change and Pacific Islands—Indicators and Impacts: Report for The 2012 Pacific Islands Regional Climate Assessment (PIRCA), Honolulu, Hawai'i, USA, pp. 80–101.

Parsons, T., 2012, Paleoseismic interevent times interpreted for an unsegmented earthquake rupture forecast: PALEOEARTHQUAKES ON UNSEGMENTED FAULTS: Geophysical Research Letters, v. 39 no. 13, n/a-n/a p., doi: 10.1029/2012gl052275.

Parsons, T., Console, R., Falcone, G., Murru, M., Yamashina, K.'ichiro, 2012, Comparison of characteristic and Gutenberg-Richter models for time-dependent M >= 7.9 earthquake probability in the Nankai-Tokai subduction zone, Japan: Earthquake forecasts in the Tokai area: Geophysical Journal International, v. 190 no. 3, pp. 1673–1688, doi: 10.1111/j.1365-246X.2012.05595.x.

Parsons, T., Field, E.H., Page, M.T., Milner, K., 2012, Possible Earthquake Rupture Connections on Mapped California Faults Ranked by Calculated Coulomb Linking Stresses: Bulletin of the Seismological Society of America, v. 102 no. 6, pp. 2667–2676, doi: 10.1785/0120110349.

Parsons, T., Geist, E.L., 2012, Were Global M>=8.3 Earthquake Time Intervals Random between 1900 and 2011? Bulletin of the Seismological Society of America, v. 102 no. 4, pp. 1583–1592, doi: 10.1785/0120110282.

Parsons, T., Kaven, J.O., Velasco, A.A., Gonzalez-Huizar, H., 2012, Unraveling the apparent magnitude threshold of remote earthquake triggering using full wavefield surface wave simulation: REMOTE EARTHQUAKE TRIGGERING MAGNITUDES: Geochemistry, Geophysics, Geosystems, v. 13 no. 6, n/a-n/a p., doi: 10.1029/2012gc004164.

Parsons, T., Ogata, Y., Zhuang, J., Geist, E.L., 2012, Evaluation of static stress change forecasting with prospective and blind tests: Prospective tests of stress change forecasts: Geophysical Journal International, v. 188 no. 3, pp. 1425–1440, doi: 10.1111/j.1365-246X.2011.05343.x.

Polgári, M., Hein, J.R., Tóth, A.L., Pál-Molnár, E., Vigh, T., Bíró, L., and Fintor, K., 2012, Microbial action formed Jurassic Mn-carbonate ore deposit in only a few hundred years (Urkut, Hungary): Geology, v. 40 no. 10, pp. 903–906, doi: 10.1130/G33304.1.

Polgári, M., Hein, J.R., Vigh, T., Szabó-Drubina, M., Fórizs, I., Bíró, L., Müller, A., Tóth, A.L., 2012, Microbial processes and the origin of the Úrkút manganese deposit, Hungary: Ore Geology Reviews, v. 47, pp. 87–109, doi: 10.1016/j.oregeorev.2011.10.001.

Presto, M.K., Storlazzi, C.D., Logan, J.B., Reiss, T.E., and Rosenberger, K.J., 2012, Coastal Circulation and Potential Coral-larval Dispersal in Maunalua Bay, Oʻahu, Hawaii—Measurements of Waves, Currents, Temperature, and Salinity, June–September 2010: U.S. Geological Survey Open-File Report 2012-1040, 67 p., URL: http://pubs.usgs.gov/of/2012/1040/.

Richmond, B., Szczucinski, W., Chagué-Goff, C., Goto, K., Sugawara, D., Witter, R., Tappin, D.R., Jaffe, B., Fujino, S., Nishimura, Y., Goff, J., 2012, Erosion, deposition and landscape change on the Sendai coastal plain, Japan, resulting from the March 11, 2011 Tohoku-oki tsunami: Sedimentary Geology, v. 282, pp. 27–39, doi: 10.1016/j.sedgeo.2012.08.005.

Romine, B.M., Fletcher, C.H., Genz, A.S., Barbee, M.M., Dyer, M., Anderson, T.R., Lim, S.C., Vitousek, S., Bochicchio, C., and Richmond, B.M., 2012, National Assessment of Shoreline Change: A GIS compilation of vector shorelines and associated shoreline change data for the sandy shorelines of Kauai, Oahu, and Maui, Hawaii: Open-File Report 2011–1009, URL: http://pubs.usgs.gov/of/2011/1009/.

Rosenbauer, R.J., Thomas, B., Bischoff, J.L., Palandri, J., 2012, Carbon sequestration via reaction with basaltic rocks: Geochemical modeling and experimental results: Geochimica et Cosmochimica Acta, v. 89, pp. 116–133, doi: 10.1016/j.gca.2012.04.042.

Rubin, D.M., 2012, A unifying model for planform straightness of ripples and dunes in air and water: Earth-Science Reviews, v. 113 no. 3-4, pp. 176–185, doi: 10.1016/j.earscirev.2012.03.010.

Ryan, H., von Huene, R., Scholl, D., and Kirby, S., 2012, Tsunami hazards to U.S. coasts from giant earthquakes in Alaska: Eos, Transactions, v. 93 no. 19, doi: 10.1029/2012eo190001.

Ryan, H.F., Conrad, J.E., Paull, C.K., McGann, M., 2012, Slip Rate on the San Diego Trough Fault Zone, Inner California Borderland, and the 1986 Oceanside Earthquake Swarm Revisited: Bulletin of the Seismological Society of America, v. 102 no. 6, pp. 2300–2312, doi: 10.1785/0120110317.

Ryan, H.F., Draut, A.E., Keranen, K., Scholl, D.W., 2012, Influence of the Amlia fracture zone on the evolution of the Aleutian Terrace forearc basin, central Aleutian subduction zone: Geosphere, v. 8 no. 6, pp. 1254–1273, doi: 10.1130/Ges00815.1.

Ryan, H.F., von Huene, R., Wells, R.E., Scholl, D.W., Kirby, S., and Draut, A.E., 2012, History of earthquakes and tsunamis along the eastern Aleutian-Alaska megathrust, with implications for tsunami hazards in the California Continental Borderland, in Dumoulin, J.A., and Dusel-Bacon, C., eds., Studies by the U.S. Geological Survey in Alaska, 2011: U.S. Geological Survey Professional Paper 1795-A, 31 p., URL: http://pubs.usgs.gov/pp/1795/a/.

Schönfeld, J., Alve, E., Geslin, E., Jorissen, F., Korsun, S., Spezzaferri, S., and Members of the FOBIMO group, 2012, The FOBIMO (FOraminiferal BIo-MOnitoring) initiative—Towards a standardised protocol for soft-bottom benthic foraminiferal monitoring studies: Marine Micropaleontology, v. 94–95, pp. 1–13, doi: 10.1016/j.marmicro.2012.06.001.

Shim, M.-J., Swarzenski, P.W., and Shiller, A.M., 2012, Dissolved and colloidal trace elements in the Mississippi River delta outflow after Hurricanes Katrina and Rita: Continental Shelf Research, v. 42, pp. 1–9, doi: 10.1016/j.csr.2012.03.007.

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Smith, C.G., and Swarzenski, P.W., 2012, An investigation of submarine groundwater-borne nutrient fluxes to the west Florida shelf and recurrent harmful algal blooms: Limnology and Oceanography, v. 57, pp. 471–485.

Smith, C.G., Swarzenski, P.W., 2012, An investigation of submarine groundwater-borne nutrient fluxes to the west Florida shelf and recurrent harmful algal blooms: Limnology and Oceanography, v. 57 no. 2, pp. 471–485, doi: 10.4319/lo.2012.57.2.0471.

Stevens, A.W., Gelfenbaum, G., Ruggiero, P., and Kaminsky, G.M, 2012, Southwest Washington littoral drift restoration—Beach and nearshore morphological monitoring: U.S. Geological Survey Open-File Report 2012–1175, 67 p., URL: http://pubs.usgs.gov/of/2012/1175/.

Stevens, A.W., Lacy, J.R., 2012, The Influence of Wave Energy and Sediment Transport on Seagrass Distribution: Estuaries and Coasts, v. 35 no. 1, pp. 92–108, doi: 10.1007/s12237-011-9435-1.

Swarzenski, P.W., Storlazzi, C.D., Presto, M.K., Gibbs, A.E., Smith, C.G., Dimova, N.T., Dailer, M.L., and Logan, J.B., 2012, Nearshore morphology, benthic structure, hydrodynamics, and coastal groundwater discharge near Kahekili Beach Park, Maui, Hawaii: U.S. Geological Survey Open-File Report 2012–1166, URL: http://pubs.usgs.gov/of/2012/1166/.

Tallis, H., Lester, S.E., Ruckelshaus, M., Plummer, M., McLeod, K., Guerry, A., Andelman, S., Caldwell, M.R., Conte, M., Copps, S., Fox, D., Fujita, R., Gaines, S.D., Gelfenbaum, G., Gold, B., Kareiva, P., Kim, C.-ki, Lee, K., Papenfus, M., Redman, S., Silliman, B., Wainger, L., White, C., 2012, New metrics for managing and sustaining the ocean's bounty: Marine Policy, v. 36 no. 1, pp. 303–306, doi: 10.1016/j.marpol.2011.03.013.

Tappin, D.R., Evans, H.M., Jordan, C.J., Richmond, B., Sugawara, D., Goto, K., 2012, Coastal changes in the Sendai area from the impact of the 2011 Tohoku-oki tsunami: Interpretations of time series satellite images, helicopter-borne video footage and field observations: Sedimentary Geology, v. 282, pp. 151–174, doi: 10.1016/j.sedgeo.2012.09.011.

Warrick, J.A., Barnard, P.L., 2012, The offshore export of sand during exceptional discharge from California rivers: Geology, v. 40 no. 9, pp. 787–790, doi: 10.1130/G33115.1.

Warrick, J.A., Duda, J.J., Magirl, C.S., Curran, C.A., 2012, River turbidity and sediment loads during dam removal: Eos, Transactions American Geophysical Union, v. 93 no. 43, doi: 10.1029/2012eo430002.

Warrick, J.A., Hatten, J.A., Pasternack, G.B., Gray, A.B., Goni, M.A., Wheatcroft, R.A., 2012, The effects of wildfire on the sediment yield of a coastal California watershed: Geological Society of America Bulletin, v. 124 no. 7-8, pp. 1130–1146, doi: 10.1130/B30451.1.

Warrick, J.A., Rosenberger, K., Lam, A., Ferreira, J., Miller, I.M., Rippy, M., Svejkovsky, J., and Mustain, N., 2012, Observations of coastal sediment dynamics of the Tijuana Estuary Fine Sediment Fate and Transport Demonstration Project, Imperial Beach, California: U.S. Geological Survey Open-File Report 2012-1083, 29 p., URL: http://pubs.usgs.gov/of/2012/1083/.

Watt, S., Buckley, M., Jaffe, B., 2012, Inland fields of dispersed cobbles and boulders as evidence for a tsunami on Anegada, British Virgin Islands: Natural Hazards, v. 63 no. 1, pp. 119–131, doi: 10.1007/s11069-011-9848-y.

Williams, B.K., Wingard, G.L., Brewer, G., Cloern, J., Gelfenbaum, G., Jacobson, R.B., Kershner, J.L., McGuire, A.D., Nichols, J.D., Shapiro, C.D., van Riper III, C., and White, R.P., 2012, The U.S. Geological Survey Ecosystem Science Strategy, 2012-2022—Advancing discovery and application through collaboration: U.S. Geological Survey Open-File Report 2012-1092, 29 p., URL: http://pubs.usgs.gov/of/2012/1092/.

Wilson, R., Davenport, C., Jaffe, B., 2012, Sediment scour and deposition within harbors in California (USA), caused by the March 11, 2011 Tohoku-oki tsunami: Sedimentary Geology, v. 282, pp. 228–240, doi: 10.1016/j.sedgeo.2012.06.001.

Witter, R.C., Jaffe, B., Zhang, Y., Priest, G., 2012, Reconstructing hydrodynamic flow parameters of the 1700 tsunami at Cannon Beach, Oregon, USA: Natural Hazards, v. 63 no. 1, pp. 223–240, doi: 10.1007/s11069-011-9912-7.

Wong, F.L., Dartnell, P., Edwards, B.D., and Phillips, E.L., 2012, Seafloor geology and benthic habitats, San Pedro Shelf, southern California: U.S. Geological Survey Data Series 552, URL: https://pubs.usgs.gov/ds/552/.

Wong, F.L., Phillips, E.L., Johnson, S.Y., and Sliter, R.W., 2012, Modeling of depth to base of Last Glacial Maximum and seafloor sediment thickness for the California State Waters Map Series, eastern Santa Barbara Channel, California: U.S. Geological Survey Open-File Report 2012-1161, 16 p., URL: https://pubs.usgs.gov/of/2012/1161/.

Wood, W., Barth G., Scholl, D., and N. Lebedeva-Ivanova, N., 2012, Using Hi-res Acoustics to VAMP Up Better Estimates of Methane Hydrate Concentrations: Deep Water Acoustic Anomalies from Methane Hydrate in the Bering Sea: Naval Research Laboratory Review, pp. 132–138.

Zhang, L., Zhang, J., Swarzenski, P.W., and Liu, Z., 2012, Radium Isotope Tracers to Evaluate Coastal Ocean Mixing and Residence Times: In: Baskaran, M. (Ed.). Handbook of Environmental Isotope Geochemistry, Springer Berlin Heidelberg, Berlin, Heidelberg, pp. 331–343, doi: 10.1007/978-3-642-10637-8_17.


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