This dataset consists of physics-based Delft3D model and Delwaq model input files used in modeling sediment deposition and concentrations around the coral reefs of west Maui, Hawaii. The Delft3D models were used to simulate waves and currents under small (SC1) and large (‘SC2’) wave conditions for current stream discharge (‘Alt1’) and stream discharge with watershed restoration (‘Alt3’). Delft3D model results were subsequently used as forcing conditions for Delwaq models to simulate sediment ...

Fine-sediment elemental chemistry, short-lived cosmogenic radionuclides (Beryllium-7, Cesium-137, and Lead-210), charcoal counts, and total organic carbon contents were quantified to describe urban and wildfire effects and land-based sediment sources and runoff to Olowalu Reef in February 2022.

This data set consists of physics-based Delft3D-FLOW and SWAN hydrodynamic models input files used to study the wave-induced 3D flow over spur-and-groove (SAG) formations. SAG are a common and impressive characteristic of coral reefs. They are composed of a series of submerged shore-normal coral ridges (spurs) separated by shore-normal patches of sediment (grooves) on the fore reef of coral reef environments. Although their existence and geometrical properties are well documented, the literature concerning ...

This part of the data release presents projected flooding extent polygon (flood masks) shapefiles based on wave-driven total water levels for the Territory of the U.S. Virgin Islands. There are 16 associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years), the current scenario (base) and each of the restoration scenarios (structural_25, structural_05, and ecological_25).

This part of the data release presents projected flooding extent polygon (flood masks) shapefiles based on wave-driven total water levels for the Commonwealth of Puerto Rico. There are 16 associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years), the current scenario (base) and each of the restoration scenarios (structural_25, structural_05, and ecological_25).

This part of the data release presents projected flooding extent polygon (flood masks) shapefiles based on wave-driven total water levels for the State Florida (the Florida Peninsula and the Florida Keys). There are 16 associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years), the current scenario (base) and each of the restoration scenarios (structural_25, structural_05, and ecological_25).

This portion of the data release presents a bathymetric point cloud from an unoccupied aerial system (UAS) survey of the coral reef off Waiakane, Molokai, Hawaii, on 24 June 2018. The point cloud has been corrected for the effects of refraction using the techniques described in Dietrich (2017a). The point cloud was created from structure-from-motion (SfM) processing of aerial imagery collected using a UAS with a Ricoh GR II digital camera fitted with a circular polarizing filter. During the survey, a ...

This portion of the data release presents the locations of the temporary ground control points (GCPs) used for the structure-from-motion (SfM) processing of the imagery collected during an unoccupied aerial system (UAS) survey of the coral reef off Waiakane, Molokai, Hawaii, on 24 June 2018. Twenty temporary ground control points (GCPs) were distributed throughout the survey area to establish survey control. The GCPs consisted of: nine submerged targets consisting of small (80 centimeter X 80 centimeter) ...

This portion of the data release presents raw aerial imagery collected during an unoccupied aerial system (UAS) survey of the coral reef off Waiakane, Molokai, Hawaii, on 24 June 2018. The imagery was acquired using a Department of Interior-owned 3DR Solo quadcopter fitted with a Ricoh GR II digital camera featuring a global shutter. The camera was mounted in a nadir orientation using a fixed mount. Before each flight, the camera’s digital ISO, aperture, and shutter speed were adjusted for ambient light ...

This data release includes the XBeach input data files used to evaluate the importance of explicitly modeling sea-swell waves for runup. This was examined using a 2D XBeach short wave-averaged (surfbeat, XB-SB) and a wave-resolving (non-hydrostatic, XB-NH) model of Roi-Namur Island on Kwajalein Atoll in the Republic of Marshall Islands. Results show that explicitly modelling the sea-swell component (using XB-NH) provides a better approximation of the observed runup than XB-SB (which only models the time ...

This portion of the data release presents a high-resolution orthomosaic image of the coral reef off Waiakane, Molokai, Hawaii. The orthomosaic has a resolution of 2.5 centimeters (cm) per pixel and was derived from structure-from-motion (SfM) processing of aerial imagery collected with an unoccupied aerial system (UAS) on 24 June 2018. The raw imagery used to create the orthomosaic was acquired using a UAS fitted with a Ricoh GR II digital camera featuring a global shutter. The UAS was flown on pre ...

A set of physics-based XBeach Non-hydrostatic hydrodynamic model simulations (with input files here included) were used to evaluate how varying carbonate budgets, and thus coral reef accretion and degradation, affect alongshore variations in wave-driven water levels along the adjacent shoreline of Buck Island Reef National Monument (BUIS) for a number of sea-level rise scenarios, specifically during extreme wave conditions when the risk for coastal flooding and the resulting impact to coastal communities is ...

Seventy six parent and alkylated polycyclic aromatic compounds, including polycyclic aromatic hydrocarbons (PAHs), were quantified in watershed and reef sediment from Olowalu, Maui, in February 2022 to explore urban and wildfire effects. Sample locations and total organic carbon contents (OC) are available in the accompanying file OlowaluWatershedReef2022_compositions.csv.

Using global climate model projections of sea-surface temperature at coral reef sites, we modeled the effects of depth and exposure to semidiurnal temperature fluctuations to examine how these effects may alter the projected year of annual severe bleaching for coral reef sites globally. Here we present the first global maps of the effects these processes have on bleaching projections for three IPCC-AR5 emissions scenarios.

This part of the data release presents projected flooding extent polygon (flood masks) and flooding depth points (flood points) shapefiles based on wave-driven total water levels for the Territory of the U.S. Virgin Islands (the islands of Saint Croix, Saint John, and Saint Thomas). For each island there are 8 associated flood mask and flood depth shapefiles: one for each four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years) and both with (wrf) and without (worf) the presence of ...

This data release provides flooding extent polygons (flood masks) and depth values (flood points) based on wave-driven total water levels for 22 locations within the States of Hawaii and Florida, the Territories of Guam, American Samoa, Puerto Rico, and the U.S. Virgin Islands, and the Commonwealth of the Northern Mariana Islands. For each of the 22 locations there are eight associated flood mask polygons and flood depth point files: one for each four nearshore wave energy return periods (rp; 10-, 50-, 100- ...

This part of the data release presents projected flooding extent polygon (flood masks) and flooding depth points (flood points) shapefiles based on wave-driven total water levels for the Territory of Puerto Rico (the islands of Culebra, Puerto Rico, and Vieques). For each island there are 8 associated flood mask and flood depth shapefiles: one for each four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years) and both with (wrf) and without (worf) the presence of coral reefs. Flooding ...

This part of the data release presents projected flooding extent polygon (flood masks) and flooding depth points (flood points) shapefiles based on wave-driven total water levels for the State of Hawaii (the islands of Hawaii, Kahoolawe, Kauai, Lanai, Maui, Molokai, Niihau, and Oahu). For each island there are 8 associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years) and both with (wrf) and without (worf) the presence of ...

This part of the data release presents projected flooding extent polygon (flood masks) and flooding depth points (flood points) shapefiles based on wave-driven total water levels for the Territory of Guam. There are 8 associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years) and both with (wrf) and without (worf) the presence of coral reefs. Flooding depth point data are also presented as a comma-separated value (.csv) ...

This part of the data release presents projected flooding extent polygon (flood masks) and flooding depth points (flood points) shapefiles based on wave-driven total water levels for the State Florida (the Florida Peninsula and the Florida Keys). For each island there are 8 associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years) and both with (wrf) and without (worf) the presence of coral reefs. Flooding depth point data ...

This part of the data release presents projected flooding extent polygon (flood masks) and flooding depth points (flood points) shapefiles based on wave-driven total water levels for Commonwealth of the Northern Mariana Islands (the islands of Saipan and Tinian). For each island there are 8 associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years) and both with (wrf) and without (worf) the presence of coral reefs.

This part of the data release presents projected flooding extent polygon (flood masks) and flooding depth points (flood points) shapefiles based on wave-driven total water levels for American Samoa (the islands of Tutuila, Ofu-Olosega, and Tau). For each island there are 8 associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years) and both with (wrf) and without (worf) the presence of coral reefs. Flooding depth point data ...

This part of the data release presents projected flooding extent polygon (flood masks) shapefiles based on wave-driven total water levels for Commonwealth of Puerto Rico. There are eight associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years), the pre-storm scenario (base) and the post-storm scenarios.

This part of the data release presents projected flooding extent polygon shapefiles based on wave-driven total water levels for the State Florida (the Florida Peninsula and the Florida Keys). There are eight associated flood mask and flood depth shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years), the pre-storm scenario (base) and the post-storm scenarios.

This data release presents projected flooding extent polygon (flood masks) shapefiles based on wave-driven total water levels for the State Florida (the Florida Peninsula and the Florida Keys). There are 12 associated flood mask shapefiles: one for each of four nearshore wave energy return periods (rp; 10-, 50-, 100-, and 500-years), the current scenario (base) and each of the degradation scenarios (Mean Elevation and Mean Erosion).

This data release includes representative cluster profiles (RCPs) from a large (>24,000) selection of coral reef topobathymetric cross-shore profiles (Scott and others, 2020). We used statistics, machine learning, and numerical modelling to develop the set of RCPs, which can be used to accurately represent the shoreline hydrodynamics of a large variety of coral reef-lined coasts around the globe. In two stages, the data were reduced by clustering cross-shore profiles based on morphology and hydrodynamic ...

An extensive set of physics-based XBeach Non-hydrostatic hydrodynamic model simulations (with input files here included) were used to evaluate the influence of shore-normal reef channels on flooding along fringing reef-lined coasts, specifically during extreme wave conditions when the risk for coastal flooding and the resulting impact to coastal communities is greatest. These input files accompany the modeling conducted for the following publication: Storlazzi, C.D., Rey, A.E., and van Dongeren, A.R., 2022, ...

A process-based wave-resolving hydrodynamic model (XBeach Non-Hydrostatic, ‘XBNH’) was used to create a large synthetic database for use in a “Bayesian Estimator for Wave Attack in Reef Environments” (BEWARE), relating incident hydrodynamics and coral reef geomorphology to coastal flooding hazards on reef-lined coasts. Building on previous work, BEWARE improves system understanding of reef hydrodynamics by examining the intrinsic reef and extrinsic forcing factors controlling runup and flooding on ...

We developed the HyCReWW metamodel to predict wave run-up under a wide range of coral reef morphometric and offshore forcing characteristics. Due to the complexity and high dimensionality of the problem, we assumed an idealized one-dimensional reef profile, characterized by seven primary parameters. XBeach Non-Hydrostatic was chosen to create the synthetic dataset and Radial Basis Functions implemented in Matlab were chosen for interpolation. Results demonstrate the applicability of the metamodel to obtain ...

This dataset consists of physics-based XBeach Non-hydrostatic hydrodynamic models input files used to study how coral reef restoration affects waves and wave-driven water levels over coral reefs, and the resulting wave-driven runup on the adjacent shoreline. Coral reefs are effective natural coastal flood barriers that protect adjacent communities. Coral degradation compromises the coastal protection value of reefs while also reducing their other ecosystem services, making them a target for restoration. ...

This data release contains water level and velocity measurements from wave runup experiments performed in a laboratory flume setting. Wave-driven water level variability (and runup at the shoreline) is a significant cause of coastal flooding induced by storms. Wave runup is challenging to predict, particularly along tropical coral reef-fringed coastlines due to the steep bathymetric profiles and large bottom roughness generated by reef organisms. The 2012 University of Western Australia Fringing Reef ...

This dataset contains the reef profiles and resulting hydrodynamic outputs of the "Broad-range Estimator of Wave Attack in Reef Environments" (BEWARE-2) meta-process modeling system. A process-based, wave-resolving hydrodynamic model (XBeach Non-Hydrostatic+, "XBNH+") was used to create a large synthetic database for use in BEWARE-2, relating incident hydrodynamics and coral reef geomorphology to coastal flooding hazards on reef-lined coasts. Building on previous work, BEWARE-2 improves system understanding ...

This portion of the data release presents a bathymetric digital surface model (DSM) from an unoccupied aerial system (UAS) survey of the coral reef off Waiakane, Molokai, Hawaii, on 24 June 2018. The DSM has a horizontal resolution of 10 centimeters per pixel and has been corrected for the effects of refraction using the techniques described in Dietrich (2017a). The DSM was created from structure-from-motion (SfM) processing of aerial imagery collected using a UAS with a Ricoh GR II digital camera fitted ...

Schematic atoll models with varying theoretical morphologies were used to evaluate the relative control of individual morphological parameters on alongshore transport gradients. Here we present physics-based numerical SWAN model results of incident wave transformations for a range of atoll and island morphologies and sea-level rise scenarios. Model results are presented in NetCDF format, accompanied by a README text file that lists the parameters used in each model run. These data accompany the following ...

Projected future wave-driven flooding depths on Roi-Namur Island on Kwajalein Atoll in the Republic of the Marshall Islands for a range of climate-change scenarios. This study utilized field data to calibrate oceanographic and hydrogeologic models, which were then used with climate-change and sea-level rise projections to explore the effects of sea-level rise and wave-driven flooding on atoll islands and their freshwater resources. The overall objective of this effort, due to the large uncertainty in ...

Projected wave climate trends from WAVEWATCH3 model output were used as input for nearshore wave models (for example, SWAN) for the main Hawaiian Islands to derive data and statistical measures (mean and top 5 percent values) of wave height, wave period, and wave direction for the recent past (1996-2005) and future projections (2026-2045 and 2085-2100). Three-hourly global climate model (GCM) wind speed and wind direction output from four different GCMs provided by the Coupled Model Inter-Comparison Project ...