Aquatic biology

The scientific study of organisms living in or near water. This term is to be used for the science of 'aquatic biology' and for biological studies in fresh and brackish water. For marine biological studies, use 'marine biology'.

27 results listed by similarity [list alphabetically]
Experimental data comparing two coral grow-out methods in nursery-raised Acropora cervicornis

Staghorn coral, Acropora cervicornis, is a threatened species and the primary focus of western Atlantic reef-restoration efforts to date. As part of the USGS Coral Reef Ecosystems Studies project (http://coastal.er.usgs.gov/crest/), scientists investigated skeletal characteristics of nursery-grown staghorn coral reared using two commonly used grow-out methods at Mote Tropical Research Laboratory’s offshore nursery. USGS staff compared linear extension, calcification rate, and skeletal density of nursery ...

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Sediment Trap Time Series of GDGT and alkenone flux in the Gulf of Mexico

The tetraether index of C86 (TEX86) and alkenone unsaturation index (Uk37Õ) molecular biomarker proxies have been broadly applied in down-core marine sediments to reconstruct past sea surface temperature (SST). Although both TEX86 and Uk37 have been interpreted as proxies for mean annual SST throughout the global ocean, regional studies of glycerol dibiphytanyl glycerol tetraethers (GDGT)s and alkenones in sinking particulate matter (SPM) are required to understand the influence of seasonality, depth ...

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Experimental coral-growth and physiological data and time-series imagery for Porites astreoides in the Florida Keys, U.S.A.

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies project (https://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. This data release contains data on coral-growth rates and time-series photographs taken of colonies of the mustard hill coral, Porites astreoides, grown at four sites on the Florida Keys reef tract from Spring 2015 to Spring 2017. The data will be used to inform resource managers on the spatial and ...

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Experimental coral-growth data and time-series imagery for Acropora palmata in the Florida Keys, U.S.A.

The USGS Coral Reef Ecosystems Studies project (https://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. This data release contains data on coral-growth rates and time-series photographs taken of colonies of the elkhorn coral, Acropora palmata, grown at five sites on the Florida Keys reef tract from Spring 2018 to Autumn 2019. The data will be used to inform resource managers of the capacity for restoration and growth of this ...

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Experimental coral-growth rate, reef survey, and time-series imagery data collected between 1998 and 2017 to investigate construction and erosion of Orbicella coral reefs in the Florida Keys, U.S.A.

The USGS Coral Reef Ecosystems Studies project (https://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. This data release contains data on coral-growth rates for Orbicella sp. coral colonies grown at five sites on the Florida Keys reef tract from 2013 to 2015, survey data for census-based carbonate budgeting at Hen and Chickens Reef (Islamorada, Florida) collected in 2017, and time-series photographs taken of permanent markers ...

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Shallow ATRIS Seafloor Images - West Turtle Shoal Patch Reef, Rawa PatchReef, Dustan Rocks Patch Reef, and Thor Patch Reef, Florida, 2011

Underwater digital images, single-beam bathymetry, and global-positioning system (GPS) data were collected September 29-30, 2011 around Dustan Rocks Patch Reef, Thor Patch Reef, West Turtle Shoal Patch Reef, and Rawa Patch Reef in the Florida Keys. A total of 101,734 images were collected, covering 4672 square meteres (m2) of reef habitat. This data release contains a subset of 1,420 images, organized into four sets: Track1, Track2, Track3, and Track4. These images were used for coral bleaching assessments ...

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Florida Keys Corals: A Photographic Record of Changes from 1959 to 2015

This data release contains time-series photographs taken of corals and coral habitats in the Florida Keys between 1959 and 2015 at Carysfort Reef and Grecian Rocks (a total of six sites). The original intent was to show coral reef recovery after Hurricane Donna devastated the area in 1960. Corals, especially elkhorn and staghorn coral, grew prolifically after the storm until the late 1970s, then began to decline, with the maximum period of decline centered around 1983 and 1984. These time-series photographs ...

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Multi-species Coral Sr/Ca Based Sea-Surface Temperature (SST) Reconstruction Data Using Orbicella faveolata and Siderastrea siderea from Dry Tortugas National Park, FL

This data release includes new sub annual and mean annual Sr/Ca records from two species of massive coral, Orbicella faveolata (coral B3) and Siderastrea siderea (coral CG2), from the Dry Tortugas National Park, FL (DTNP). We combine these new records with published Sr/Ca data from three additional S. siderea coral (DeLong et al., 2014) to generate a 278-year long multi-species stacked Sr/Ca-SST record from DRTO.

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Shallow Along Track Reef Imaging System (sATRIS) Images – Dry Tortugas, Florida, 2011

Underwater digital images, single-beam bathymetry, and global positioning system (GPS) data were collected July 13 to July 17, 2011 within Dry Tortugas National Park, Florida, USA. A total of 272,828 images of the seafloor and water column were collected along pre-defined transect lines and organized into 14 sets, track1-track14. This data release contains a subset of those images (43,991 images), all of which were used for benthic habitat classification and contain GPS data. The data were collected using ...

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Shallow Along Reef Track Imaging System (sATRIS) Images – Dry Tortugas, Florida, 2009

Underwater digital images, single-beam bathymetry, and global positioning system (GPS) data were collected June 13-14, 2009 at Pulaski Shoal within Dry Tortugas National Park, Florida, USA. A total of 195,406 images of the seafloor and water column were collected along pre-defined transect lines and organized into 3 sets: track1, track2, and track3. This data release contains a subset of those images (32,135 images), all of which were used for benthic habitat classification, and contain GPS data. The data ...

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Distribution of Benthic Habitats at Crocker Reef, Florida, 2014

The distribution of benthic habitats for a 1-kilometer (km) x 1-km area around Crocker Reef in the Florida Keys, USA, is based upon underwater digital images of the seafloor collected on June 24 and 25, 2014 (Zawada and others, 2016). The imagery was collected using the U.S. Geological Survey (USGS) shallow Along-Track Reef-Imaging System (sATRIS), a boat-based, pole-mounted sensor package for mapping shallow-water benthic environments. The polygons contained in the shapefile included in this data release, ...

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Shallow ATRIS (sATRIS) Images Crocker Reef, Florida, 2014

Underwater digital images, single-beam bathymetry, and global positioning system (GPS) data were collected June 24-25, 2014, within a 1-kilkometer (km) x 1-km area around Crocker Reef in the Florida Keys, USA. A total of 91,206 images of the seafloor and water column were collected along pre-defined transect lines and organized into three sets: track1, track2, and track3. This data release contains a subset of those images (25,485 images), all of which were used for benthic habitat classification, and ...

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Grainsize and Mineralogy Data of Sediments Samples Collected at Crocker Reef, Florida, 2013-2014

Understanding the processes that govern whether a coral reef is accreting (growing) or dissolving are fundamental to questions of reef health and resiliency. A total of 52 surficial sediment samples were collected within a 1-km x 1-km area around Crocker Reef in the Florida Keys, USA, between 2013 and 2014. Samples 1-35 were collected in July 2013 and samples 36-52 were collected in July 2014. The samples were processed using conventional, published techniques (see process step 2) to yield grain size and ...

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Photomicrograph Images of Sediment Samples Collected at Crocker Reef, Florida, 2013-2014

Understanding the processes that govern whether a coral reef is accreting (growing) or dissolving are fundamental to questions of reef health and resiliency. A total of 52 surficial sediment samples were collected within a 1-km x 1-km area around Crocker Reef in the Florida Keys, USA, between 2013 and 2014. Samples 1-35 were collected in July 2013 and samples 36-52 were collected in July 2014. The samples were processed using conventional, published techniques (see process step section) to yield grain size ...

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Time-series coral-cover data from Hawaii, Florida, Mo'orea, and the Virgin Islands

Coral reefs around the world have degraded over the last half-century as evidenced by loss of live coral cover. This ubiquitous observation led to the establishment of long-term, ecological monitoring programs in several regions with sizable coral-reef resources. As part of the U.S. Geological Survey (USGS) John Wesley Powell Center for Analysis and Synthesis working group "Local-scale ecosystem resilience amid global-scale ocean change: the coral reef example," scientists gathered resultant data from four ...

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Underwater temperature on off-shore coral reefs of the Florida Keys, U.S.A. (Version 7)

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (https://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. Coral reef organisms are very sensitive to high and low water-temperature extremes. It is critical to precisely know water temperatures experienced by corals and associated plants and animals that live in the dynamic nearshore environment to document thresholds in temperature tolerance. This ...

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Underwater temperature data collected from off-shore coral reefs of the Florida Keys, U.S.A. (Version 6)

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (https://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. Coral reef organisms are very sensitive to high and low water-temperature extremes. It is critical to precisely know water temperatures experienced by corals and associated plants and animals that live in the dynamic nearshore environment to document thresholds in temperature tolerance. This ...

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Underwater temperature data collected from off-shore coral reefs of the Florida Keys, U.S.A. (Version 5)

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (https://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. Coral reef organisms are very sensitive to high and low water-temperature extremes. It is critical to precisely know water temperatures experienced by corals and associated plants and animals that live in the dynamic nearshore environment to document thresholds in temperature tolerance. This ...

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Underwater temperature data collected from off-shore coral reefs of the Florida Keys, U.S.A. (Version 4)

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (https://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. Coral reef organisms are very sensitive to high and low water-temperature extremes. It is critical to precisely know water temperatures experienced by corals and associated plants and animals that live in the dynamic nearshore environment to document thresholds in temperature tolerance. This ...

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Underwater temperature data collected from off-shore coral reefs of the Florida Keys, U.S.A. (Version 3)

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (https://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. Coral reef organisms are very sensitive to high and low water-temperature extremes. It is critical to precisely know water temperatures experienced by corals and associated plants and animals that live in the dynamic nearshore environment to document thresholds in temperature tolerance. This ...

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Underwater temperature data collected from off-shore coral reefs of the Florida Keys, U.S.A. (Version 2)

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (http://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. Coral reef organisms are very sensitive to high and low water-temperature extremes. It is critical to precisely know water temperatures experienced by corals and associated plants and animals that live in the dynamic nearshore environment to document thresholds in temperature tolerance. This ...

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Collections inventory for the U.S. Geological Survey Woods Hole Coastal and Marine Science Center Samples Repository (ver. 2.0, September 2023)

Since 2002, the Woods Hole Coastal and Marine Science Center’s Samples Repository supports research by providing secure storage for geological, biological, and geochemical samples; maintaining organization and an active inventory of these sample collections; and providing access to these collections for study and reuse. This collections inventory has been compiled, organized, and released as a searchable database to provide researchers and the general public with means to discover and request scientific ...

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Experimental coral-physiology data for Acropora palmata in Florida, U.S.A.

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (https://coastal.er.usgs.gov/crest/) provides science that helps Department of Interior and other resource managers tasked with the stewardship of coral reef resources. This data release contains data on coral physiology of the elkhorn coral, Acropora palmata, grown at five sites along the Florida outer reef tract including in Biscayne National Park, the Florida Keys National Marine Sanctuary, and Dry Tortugas National Park, ...

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Experimental coral-growth data and time-series imagery for Acropora palmata and Pseudodiploria strigosa in St. Croix, U.S. Virgin Islands

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (https://coastal.er.usgs.gov/crest/) provides science that helps Department of Interior and other resource managers tasked with the stewardship of coral reef resources. This data release contains data on coral-growth rates and time-series photographs taken of colonies of the elkhorn coral, Acropora palmata, and the symmetrical brain coral, Pseudodiploria strigosa, grown at three sites at Buck Island Reef National Monument in St. ...

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Underwater temperature on off-shore coral reefs of the Florida Keys, U.S.A. (Version 8)

The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (https://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. Coral reef organisms are very sensitive to high and low water-temperature extremes. It is critical to precisely know water temperatures experienced by corals and associated plants and animals that live in the dynamic nearshore environment to document thresholds in temperature tolerance. This ...

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Data for evaluating the Sr/Ca temperature proxy with in-situ temperature in the western Atlantic coral Siderastrea siderea

Massive corals are used as environmental recorders throughout the tropics and subtropics to study environmental variability during time periods preceding ocean-observing instrumentation. However, careful testing of paleoproxies is necessary to validate the environmental-proxy record throughout a range of conditions experienced by the recording organisms. As part of the USGS Coral Reef Ecosystems Studies project (http://coastal.er.usgs.gov/crest/), we tested the hypothesis that the coral Siderastrea siderea ...

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Coral cores collected in Dry Tortugas National Park, Florida, U.S.A.: Photographs and X-rays

Cores from living coral colonies were collected from Dry Tortugas National Park, Florida, to obtain skeletal records of past coral growth and allow geochemical reconstruction of environmental variables during the corals’ centuries-long lifespans. The samples were collected as part of the U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies project (http://coastal.er.usgs.gov/crest/) that provides science to assist resource managers tasked with the stewardship of coral reef resources. Three colonies ...

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