Biota

Flora or fauna in natural environment, for example wildlife, vegetation, biological sciences, ecology, wilderness, sea life, wetlands, habitat, biological resources
Subtopics:
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170 results listed by similarity [list alphabetically]
DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Wreck Island, VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Smith Island, VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Ship Shoal Island, VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Rhode Island National Wildlife Refuge, RI, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Parker River, MA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Parramore Island, VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Myrtle Island, VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Monomoy Island, MA, 2013-2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Metompkin Island, VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Fisherman Island, VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Cobb Island, VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Coast Guard Beach, MA, 2013-2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Cape Lookout, NC, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Cape Hatteras, NC, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Assawoman Island, VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSH_Shoreline: Distance to foraging areas for piping plovers including foraging shoreline, cost mask, and least-cost path distance: Assateague Island, MD & VA, 2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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Wave thrust values at point locations along the shorelines of Chesapeake Bay, Maryland and Virginia

This product provides spatial variations in wave thrust along shorelines in the Chesapeake Bay. Natural features of relevance along the Bay coast are salt marshes. In recent times, marshes have been eroding primarily through lateral erosion. Wave thrust represents a metric of wave attack acting on marsh edges. The wave thrust is calculated as the vertical integral of the dynamic pressure of waves. This product uses a consistent methodology with sufficient spatial resolution to include the distinct features ...

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Eddy covariance fluxes of carbon dioxide and methane from the Herring River in Wellfleet, MA (ver 2.0, June 2022)

Saline tidal wetlands are important sites of carbon sequestration and produce negligible methane (CH4) emissions due to regular inundation with sulfate-rich seawater. Yet, widespread management of coastal hydrology has restricted vast areas of coastal wetlands to tidal exchange. These ecosystems often undergo impoundment and freshening, which in turn cause vegetation shifts like invasion by Phragmites, that affect ecosystem carbon balance. Understanding controls of carbon exchange in these understudied ...

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Static chamber fluxes of carbon dioxide and methane from Phragmites wetlands and supporting data collected across a salinity gradient on Cape Cod, Massachusetts

Saline tidal wetlands are important sites of carbon sequestration and produce negligible methane (CH4) emissions due to regular inundation with sulfate-rich seawater. Yet, widespread management of coastal hydrology has restricted vast areas of coastal wetlands to tidal exchange. These ecosystems often undergo impoundment and freshening, which in turn cause vegetation shifts like invasion by Phragmites, that affect ecosystem carbon balance. Understanding controls of carbon exchange in these understudied ...

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Static chamber fluxes of carbon dioxide and methane from coastal wetlands on Upper Cape Cod, Massachusetts and supporting environmental data, 2021

Saline tidal wetlands are important sites of carbon sequestration and produce negligible methane (CH4) emissions due to regular inundation with sulfate-rich seawater. Yet, widespread management of coastal hydrology has restricted vast areas of coastal wetlands to tidal exchange. These ecosystems often undergo impoundment and freshening, which in turn cause vegetation shifts like invasion by Phragmites, that affect ecosystem carbon balance. Understanding controls of carbon exchange in these understudied ...

Info
Wave thrust values at point locations along the shorelines of Massachusetts and Rhode Island

This product provides spatial variations in wave thrust along shorelines in Massachusetts and Rhode Island. Natural features of relevance along the State coast are salt marshes. In recent times, marshes have been eroding primarily through lateral erosion. Wave thrust represents a metric of wave attack acting on marsh edges. The wave thrust is calculated as the vertical integral of the dynamic pressure of waves. This product uses a consistent methodology with sufficient spatial resolution to include the ...

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Collection, analysis, and age-dating of sediment cores from a salt marsh platform and ponds, Rowley, Massachusetts, 2014-15

Sediment cores were collected from three sites within the Plum Island Ecosystems Long-Term Ecological Research (PIE-LTER) domain in Massachusetts to obtain estimates of long-term marsh decomposition and evaluate shifts in the composition and reactivity of sediment organic carbon in disturbed marsh environments. Paired sediment cores were collected from three sites on the marsh platform and from three ponds; these cores were about 100 and 50 centimeters in length, respectively. The marsh sites had similar ...

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Table and accompanying photographs for biogeomorphic classification of shorebird nesting sites on the U.S. Atlantic coast from March to September, 2016

Atlantic coast piping plover (Charadrius melodus) nest sites are typically found on low-lying beach and dune systems, which respond rapidly to coastal processes like sediment overwash, inlet formation, and island migration that are sensitive to climate-related changes in storminess and the rate of sea-level rise. Data were obtained to understand piping plover habitat distribution and use along their Atlantic Coast breeding range. A smartphone application called iPlover was developed to collect standardized ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Rockaway Peninsula, NY, 2013–2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Rockaway Peninsula, NY, 2012

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Rockaway Peninsula, NY, 2010–2011

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Fire Island, NY, 2014–2015

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Fire Island, NY, 2012

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Fire Island, NY, 2010–2011

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Edwin B. Forsythe NWR, NJ, 2013–2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Edwin B. Forsythe NWR, NJ, 2012

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

Info
DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Edwin B. Forsythe NWR, NJ, 2010

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Cedar Island, VA, 2013–2014

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Cedar Island, VA, 2012–2013

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

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DisMOSH, Cost, MOSHShoreline: Distance to foraging areas for piping plovers (foraging shoreline, cost mask, and least-cost path distance): Cedar Island, VA, 2010–2011

Understanding how sea-level rise will affect coastal landforms and the species and habitats they support is critical for crafting approaches that balance the needs of humans and native species. Given this increasing need to forecast sea-level rise effects on barrier islands in the near and long terms, we are developing Bayesian networks to evaluate and to forecast the cascading effects of sea-level rise on shoreline change, barrier island state, and piping plover habitat availability. We use publicly ...

Info
Table and accompanying photographs for biogeomorphic classification of shorebird nesting sites on the U.S. Atlantic coast from April to August, 2015

Atlantic coast piping plover (Charadrius melodus) nest sites are typically found on low-lying beach and dune systems, which respond rapidly to coastal processes like sediment overwash, inlet formation, and island migration that are sensitive to climate-related changes in storminess and the rate of sea-level rise. Data were obtained to understand piping plover habitat distribution and use along their Atlantic Coast breeding range. A smartphone application called iPlover was developed to collect standardized ...

Info
Table and accompanying photographs for biogeomorphic classification of shorebird nesting sites on the U.S. Atlantic coast from May to August, 2014

Atlantic coast piping plover (Charadrius melodus) nest sites are typically found on low-lying beach and dune systems, which respond rapidly to coastal processes like sediment overwash, inlet formation, and island migration that are sensitive to climate-related changes in storminess and the rate of sea-level rise. Data were obtained to understand piping plover habitat distribution and use along their Atlantic Coast breeding range. A smartphone application called iPlover was developed to collect standardized ...

Info
30 meter Esri binary grids of probability of predicted elevation with respect to projected sea levels for the Northeastern U.S. from Maine to Virginia for the 2020s, 2030s, 2050s and 2080s (Albers, NAD 83)

The U.S. Geological Survey has been forecasting sea-level rise impacts on the landscape to evaluate where coastal land will be available for future use. The purpose of this project is to develop a spatially explicit, probabilistic model of coastal response for the Northeastern U.S. to a variety of sea-level scenarios that take into account the variable nature of the coast and provides outputs at spatial and temporal scales suitable for decision support. Model results provide predictions of adjusted land ...

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30 meter Esri binary grids of coastal response type probabilities with respect to projected sea levels for the Northeastern U.S. from Maine to Virginia for the 2020s, 2030s, 2050s and 2080s (Albers, NAD 83)

The U.S. Geological Survey has been forecasting sea-level rise impacts on the landscape to evaluate where coastal land will be available for future use. The purpose of this project is to develop a spatially explicit, probabilistic model of coastal response for the Northeastern U.S. to a variety of sea-level scenarios that take into account the variable nature of the coast and provides outputs at spatial and temporal scales suitable for decision support. Model results provide predictions of adjusted land ...

Info
30 meter Esri binary grids of predicted elevation with respect to projected sea levels for the Northeastern U.S. from Maine to Virginia for the 2020s, 2030s, 2050s and 2080s (Albers, NAD 83)

The U.S. Geological Survey has been forecasting sea-level rise impacts on the landscape to evaluate where coastal land will be available for future use. The purpose of this project is to develop a spatially explicit, probabilistic model of coastal response for the Northeastern U.S. to a variety of sea-level scenarios that take into account the variable nature of the coast and provides outputs at spatial and temporal scales suitable for decision support. Model results provide predictions of adjusted land ...

Info
Bottom photographs (JPEG format) collected by the U.S. Geological Survey offshore of Massachusetts between Duxbury and Hull (DH_SEABOSS_Photos)

These data were collected under a cooperative agreement with the Massachusetts Office of Coastal Zone Management (CZM) and the U.S. Geological Survey (USGS), Coastal and Marine Geology Program, Woods Hole Science Center (WHSC). Initiated in 2003, the primary objective of this program is to develop regional geologic framework information for the management of coastal and marine resources. Accurate data and maps of sea-floor geology are important first steps toward protecting fish habitat, delineating marine ...

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Geographic Locations of Images in the USGS Collection of Photographs from the Stellwagen Bank National Marine Sanctuary Region (SB_PHOTOLOCS (Shapefile))

The U.S. Geological Survey, in collaboration with the National Oceanic and Atmospheric Administration's (NOAA) National Marine Sanctuary Program, conducted seabed mapping and related research in the Stellwagen Bank National Marine Sanctuary region from 1994 to 2004. The mapped area is approximately square 3,700 km (1,100 square nm) in size and was subdivided into 18 quadrangles. Several series of sea floor maps of the region based on multibeam sonar surveys have been published. In addition, 2,628 seabed ...

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USGS Collection of Sea Bottom Photographs from the Stellwagen Bank National Marine Sanctuary Region (JPEG images)

The U.S. Geological Survey, in collaboration with the National Oceanic and Atmospheric Administration's (NOAA) National Marine Sanctuary Program, conducted seabed mapping and related research in the Stellwagen Bank National Marine Sanctuary region from 1994 to 2004. The mapped area is approximately 3,700 square km (1,100 square nm) in size and was subdivided into 18 quadrangles. Several series of sea floor maps of the region based on multibeam sonar surveys have been published. In addition, 2,628 seabed ...

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Microbial Ecology of the Floridan Aquifer near Okeechobee, FL

This metadata record describes the microbial uptake of nutrients by native planktonic and biofilm-associated bacteria within the Upper Floridan Aquifer (approximately 1,000 feet below land surface) in the Okeechobee, Florida area. Groundwater samples were collected between 2018 and 2019 from a South Florida Water Management District (SFWMD) monitoring well installed at the Kissimmee River Aquifer Storage and Recovery (ASR) facility, which is located at the discharge point of the Kissimmee River into Lake ...

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Sediment Trap Time Series of GDGT and alkenone flux in the Gulf of Mexico

The tetraether index of C86 (TEX86) and alkenone unsaturation index (Uk37Õ) molecular biomarker proxies have been broadly applied in down-core marine sediments to reconstruct past sea surface temperature (SST). Although both TEX86 and Uk37 have been interpreted as proxies for mean annual SST throughout the global ocean, regional studies of glycerol dibiphytanyl glycerol tetraethers (GDGT)s and alkenones in sinking particulate matter (SPM) are required to understand the influence of seasonality, depth ...

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Holocene evolution of sea-surface temperature and salinity in the Gulf of Mexico

Stable oxygen and carbon isotope composition (δ18O and δ13C) and magnesium-to-calcium (Mg/Ca) ratios were measured in the tests of planktic foraminiferal species, Globigerinoides ruber (white variety), in a northwestern Gulf of Mexico (GoM) sediment core 2010-GB2-GC1 collected from the Garrison Basin (26.67°N, 93.92°W) at a water depth of 1776 meters (m), aboard the R/V Cape Hatteras in April 2010. These measurements are used to generate sub-centennial-scale reconstructions of sea surface temperature ...

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Presence/absence Quantitative Polymerase Chain Reaction (qPCR) Data from the Sediment-Bound Contaminant Resiliency and Response Strategy Pilot Study, Northeastern United States, 2015

Due to the recognized proliferation and spread of antibiotic resistance genes by anthropogenic use of antibiotics for human, agriculture and aquaculture purposes, antibiotic resistance genes have been defined as an emerging contaminant (Laxminarayan and others, 2013; Rodriguez-Rojas and others, 2013; Niu and others, 2016). The presence and spread of these genes in non-clinical and non-agricultural environments has created the need for background investigations to enhance our understanding of the magnitude ...

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Cold-water coral microbiomes (Acanthogorgia spp. Desmophyllum dianthus, and Lophelia pertusa) from the Gulf of Mexico and Atlantic Ocean off the southeast coast of the United States: raw sequencing data

The files provided in this U.S. Geological Survey (USGS) data release (Kellogg and Voelschow, 2021) are the raw DNA sequence files referenced in the associated journal article (Kellogg and Pratte, 2021) entitled, “Unexpected diversity of Endozoicomonas in deep-sea corals.”. This dataset, PRJNA699458_16S-V3V4_raw_data_1.zip, represents the 16S rRNA gene amplicon surveys of 28 samples of deep-sea corals, including Acanthogorgia aspera (n=5), Acanthogorgia spissa (n=4), Desmophyllum dianthus (n=7), and ...

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Benthic foraminiferal data from the eastern Mississippi Sound salt marshes and estuaries

Microfossil (benthic foraminifera) and coordinate/elevation data were obtained from sediments collected in the coastal zones of Mississippi and Alabama, including marsh and estuarine environments of eastern Mississippi Sound and Mobile Bay, in order to develop a census for coastal environments and to aid in paleoenvironmental reconstruction. These data provide a baseline dataset for use in future wetland and estuarine change studies and assessments, both descriptive and predictive types. The data presented ...

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Benthic foraminiferal data from sedimentary cores collected in the Grand Bay (Mississippi) and Dauphin Island (Alabama) salt marshes

Microfossil (benthic foraminifera) data from coastal areas were collected from state and federally managed lands within the Grand Bay National Estuarine Research Reserve and Grand Bay National Wildlife Refuge, Grand Bay, Mississippi/Alabama; federally managed lands of Bon Secour National Wildlife Refuge on Cedar Island and Little Dauphin Island, Alabama; and municipally managed land around Dauphin Island, Alabama. Samples were analyzed and quantified for foraminiferal census in order to document changes to ...

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Benthic foraminiferal data from sedimentary cores collected in the Grand Bay (Mississippi) and Dauphin Island (Alabama) salt marshes

Microfossil (benthic foraminifera) data from coastal areas were collected from state and federally managed lands within the Grand Bay National Estuarine Research Reserve and Grand Bay National Wildlife Refuge, Grand Bay, Mississippi/Alabama; federally managed lands of Bon Secour National Wildlife Refuge on Cedar Island and Little Dauphin Island, Alabama; and municipally managed land around Dauphin Island, Alabama. Samples were analyzed and quantified for foraminiferal census in order to document changes to ...

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Benthic foraminiferal data from the eastern Mississippi Sound salt marshes and estuaries

Microfossil (benthic foraminifera) and coordinate/elevation data were obtained from sediments collected in the coastal zones of Mississippi and Alabama, including marsh and estuarine environments of eastern Mississippi Sound and Mobile Bay, in order to develop a census for coastal environments and to aid in paleoenvironmental reconstruction. These data provide a baseline dataset for use in future wetland and estuarine change studies and assessments, both descriptive and predictive types. The data presented ...

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Microbial and environmental dataset from Crocker Reef, Florida Keys, 2014-2015

Crocker Reef was the site of an integrated reefscape characterization effort focused on calcification and related biogeochemical processes as part of the USGS Coral Reef Ecosystem Study (CREST) project. This effort included two intensive seasonal sampling trips to capture summer (July 8 to 17, 2014) and winter (January 29 to February 5, 2015) conditions. This data release represents water column microbial and environmental data collected for use as metadata in future publications examining reef metabolic ...

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Cold-water coral metagenomes (Lophelia pertusa) from the Gulf of Mexico and Atlantic Ocean: raw data

In 2009, three unique colonies of the cold-water coral Lophelia pertusa were sampled in the western Atlantic Ocean to examine their microbial metagenomes. Nine additional samples were collected from three sites (Viosca Knoll 826, Viosca Knoll 906, and West Florida Slope) around the Gulf of Mexico in 2009 and 2010. Previous studies have examined the bacterial associates of this coral, but to date, no cold-water coral metagenomes have been published. This analysis characterized and identified microbial ...

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Foraminiferal Mg/Ca data from IODP sediment core U1446

In 2019, the magnesium-to-calcium (Mg/Ca) ratios were measured in the tests of planktic foraminiferal species, Globigerinoides ruber (white variety), in a subset of samples from Integrated Ocean Drilling Program (IODP) sediment core U1146 from the Bay of Bengal drilled November 2014 to January 2015. For further information regarding data collection and/or processing methods, refer to the associated journal article (Clemens and others, 2021).

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Southeast Florida and Florida Keys Antibiotic Resistance Study

The prevalence of antibiotic resistance genes in microbial communities from sewage wastewater streams and from offshore marine sediments in the vicinity of sewage wastewater outfalls in Southeast Florida was investigated from June 2018 to March 2019. Sediment and wastewater samples were analyzed for 15 different antibiotic resistant gene targets via polymerase chain reaction (PCR) presence/absence assays in Southeast Florida coral reef environments. Data collected from five sites (Broward North Wastewater ...

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YSI water quality data from August 2015 from Dauphin Island and the surrounding areas.

Scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center collected 303 surface sediment samples from Dauphin Island, Alabama, and the surrounding water bodies in August 2015. These sediments were processed to determine physical characteristics such as organic content, bulk density, and grain-size. The environments where the sediments were collected include high and low salt marshes, over-wash deposits, dunes, beaches, sheltered bays, and open water. Sampling by the USGS ...

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Sediment Sample Locations Collected in August 2015 from Dauphin Island and the surrounding areas

Scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center collected 303 surface sediment samples from Dauphin Island, Alabama, and the surrounding water bodies in August 2015. These sediments were processed to determine physical characteristics such as organic content, bulk density, and grain-size. The environments where the sediments were collected include high and low salt marshes, over-wash deposits, dunes, beaches, sheltered bays, and open water. Sampling by the USGS ...

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Surface sediment physical parameters data collected in August 2015 from Dauphin Island and the surrounding areas

Scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center collected 303 surface sediment samples from Dauphin Island, Alabama, and the surrounding water bodies in August 2015. These sediments were processed to determine physical characteristics such as organic content, bulk density, and grain-size. The environments where the sediments were collected include high and low salt marshes, over-wash deposits, dunes, beaches, sheltered bays, and open water. Sampling by the USGS ...

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Textural description of surface sediment samples collected in August 2015 from Dauphin Island and the surrounding areas

Scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center collected 303 surface sediment samples from Dauphin Island, Alabama, and the surrounding water bodies in August 2015. These sediments were processed to determine physical characteristics such as organic content, bulk density, and grain-size. The environments where the sediments were collected include high and low salt marshes, over-wash deposits, dunes, beaches, sheltered bays, and open water. Sampling by the USGS ...

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Sediment Core Locations Collected in March 2012 from the Chandeleur Islands, Louisiana (U.S. Geological Survey Field Activity Number 12BIM01)

Scientists from the U.S. Geological Survey (USGS), St. Petersburg Coastal and Marine Science Center collected a set of sediment cores from the back-barrier environments along the Chandeleur Islands, Louisiana, in March 2012. The sampling efforts were part of a larger USGS study to evaluate effects on the geomorphology of the Chandeleur Islands following the construction of an artificial sand berm to reduce oil transport onto federally managed lands. The objective of this study was to evaluate the response ...

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Radiochemistry Data from Sediment Cores Collected in March 2012 Along the Northern Chandeleur Islands, Louisiana (U.S. Geological Survey Field Activity Numbers 12BIM01)

Scientists from the U.S. Geological Survey (USGS), St. Petersburg Coastal and Marine Science Center collected a set of sediment cores from the back-barrier environments along the Chandeleur Islands, Louisiana, in March 2012. The sampling efforts were part of a larger USGS study to evaluate effects on the geomorphology of the Chandeleur Islands following the construction of an artificial sand berm to reduce oil transport onto federally managed lands. The objective of this study was to evaluate the response ...

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Sediment Physical Properties Data from Sediment Cores Collected in March 2012 Along the Northern Chandeleur Islands, Louisiana (U.S. Geological Survey Field Activity Numbers 12BIM01)

Scientists from the U.S. Geological Survey (USGS), St. Petersburg Coastal and Marine Science Center collected a set of sediment cores from the back-barrier environments along the Chandeleur Islands, Louisiana, in March 2012. The sampling efforts were part of a larger USGS study to evaluate effects on the geomorphology of the Chandeleur Islands following the construction of an artificial sand berm to reduce oil transport onto federally managed lands. The objective of this study was to evaluate the response ...

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Sediment Grain-Size Data from Sediment Cores Collected in March 2012 Along the Northern Chandeleur Islands, Louisiana (U.S. Geological Survey Field Activity Numbers 12BIM01)

Scientists from the U.S. Geological Survey (USGS), St. Petersburg Coastal and Marine Science Center collected a set of sediment cores from the back-barrier environments along the Chandeleur Islands, Louisiana, in March 2012. The sampling efforts were part of a larger USGS study to evaluate effects on the geomorphology of the Chandeleur Islands following the construction of an artificial sand berm to reduce oil transport onto federally managed lands. The objective of this study was to evaluate the response ...

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Multi-species Coral Sr/Ca Based Sea-Surface Temperature (SST) Reconstruction Data Using Orbicella faveolata and Siderastrea siderea from Dry Tortugas National Park, FL

This data release includes new sub annual and mean annual Sr/Ca records from two species of massive coral, Orbicella faveolata (coral B3) and Siderastrea siderea (coral CG2), from the Dry Tortugas National Park, FL (DTNP). We combine these new records with published Sr/Ca data from three additional S. siderea coral (DeLong et al., 2014) to generate a 278-year long multi-species stacked Sr/Ca-SST record from DRTO.

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Sr/Ca and linear extension data for five modern Orbicella faveolata colonies from Dry Tortugas National Park, Florida, USA

This data release includes new, sub-annual Strontium/Calcium (Sr/Ca) and annual linear extension rates covering a period between 1980 and 2012 for five colonies of the massive coral, Orbicella faveolata (O. faveolata). All five coral colonies were collected live by U.S. Geological Survey (USGS) scientists from the Dry Tortugas National Park (DTNP), Florida (FL) in August 2008 and May 2012.

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Digital Polymerase Chain Reaction (dPCR) Data from the Sediment-Bound Contaminant Resiliency and Response Strategy Pilot Study, Northeastern United States, 2015

Due to the recognized proliferation and spread of antibiotic resistance genes by anthropogenic use of antibiotics for human, agriculture and aquaculture purposes, antibiotic resistance genes have been defined as an emerging contaminant (Laxminarayan and others, 2013; Rodriguez-Rojas and others, 2013; Niu and others, 2016). The presence and spread of these genes in non-clinical and non-agricultural environments has created the need for background investigations to enhance our understanding of the magnitude ...

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Coral microbiome preservation and extraction method comparison of samples collected in March and August 2018-raw data

The files in this this U.S. Geological Survey (USGS) data release (Kellogg and others, 2021) are the raw 16S ribosomal ribonucleic acid (rRNA) gene amplicon deoxyribonucleic acid (DNA) sequence files from 90 samples of tropical and cold-water corals, as well as sequence files from a mock community and extraction blanks for the kits used for DNA extraction. The mock community was sequenced in order to assess any biases in the sequencing technology, while extraction blanks were sequenced in order to identify ...

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Cold-water coral microbiomes (Primnoa spp.) from Gulf of Alaska, Baltimore Canyon, and Norfolk Canyon: raw data

The files in this data release are the raw DNA sequence files referenced in the journal article by Goldsmith and others (2018) entitled "Comparison of microbiomes of cold-water corals Primnoa pacifica and Primnoa resedaeformis, with possible link between microbiome composition and host genotype". They represent a 16S ribosomal ribonucleic acid (rRNA) gene amplicon survey of the corals’ microbiomes (Primnoa spp.) completed using Roche 454 pyrosequencing with Titanium series reagents. The 16S rRNA gene ...

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Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data

The files in this data release are the raw deoxyribonucleic acid (DNA) sequence files referenced in the submitted journal article by Christina A. Kellogg, Dawn B. Goldsmith and Michael A. Gray entitled "Biogeographic comparison of Lophelia-associated bacterial communities in the western Atlantic reveals conserved core microbiome". They represent a 16S ribosomal ribonucleic acid (rRNA) gene amplicon survey of the coral’s microbiomes completed using Roche 454 pyrosequencing with Titanium series reagents. ...

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Experimental PCR Data on Soil DNA Extracts

Bacillus species and B. anthracis presence/absence data were determined in 4,770 soil samples collected across the contiguous United States, in cooperation with the U.S. Environmental Protection Agency (EPA). Polymerase Chain Reaction (PCR) data for Bacillus species and B. anthracis rpoB gene PCR amplicon detection were reported as non-detect (n), low (l), medium (m), and high (h). Results for both pag and lef genes of the pX01 plasmid were reported by the University of South Florida's Center for Biological ...

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Raw sequencing and amplicon sequence variant data from bacterial communities shed by Montastraea cavernosa coral fragments into filtered seawater mesocosms

The files provided in this U.S. Geological Survey (USGS) data release (Kellogg and others, 2021) include an amplicon sequence variant (ASV) table and the raw 16S rRNA gene amplicon files from six microbial communities (Mcav17, Mcav18, McH-101, McH-103, McD-57, and McD-58) derived from mesocosms consisting of filtered seawater in which either healthy or diseased (stony coral tissue loss disease) fragments of Montastraea cavernosa had been incubated, as well as sequence files of a mock community and ...

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Cold-water coral microbiomes (Astrangia poculata) from Narragansett Bay: sequence data

The files provided in this data release are the DNA sequence files referenced in Goldsmith and others (2019), which represent a 16S ribosomal ribonucleic acid (rRNA) gene amplicon survey of Astrangia poculata microbiomes completed using Sanger dideoxy sequencing. The coral samples were collected from Narragansett Bay at Fort Wetherill State Park, Jamestown, Rhode Island in 2015 and 2016 (Sharp and others, 2017). Sequences were obtained by first extracting DNA from a fragment of each A. poculata sample ...

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Surficial and Downcore Sedimentological and Foraminiferal Microfossil Data from St. Marks National Wildlife Refuge, Florida

In October 2019, five marsh push cores (core names appended with M for marsh push core) and 18 surface sediment samples (top 1 cm of sediment) were collected from the estuary (sample name appended G for PONAR grab) near the mouth of the St. Marks River and some of the surrounding marshes (sample name appended with S for surface), along with elevation transects and peat augers (sample name appended with R or R50, depending on length, for Russian peat auger). The purpose of the study was to 1) evaluate peat ...

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Sedimentary Data Collected in September 2016 From Old Tampa Bay, Florida (U.S. Geological Survey Field Activity Number 2016–350–FA)

The toxic dinoflagellate Pyrodinium bahamense (P. bahamense) produces recurring, persistent summer algal blooms in Old Tampa Bay, Florida, which degrade water quality and are potentially harmful to humans if contaminated shellfish is consumed. As part of its life cycle, P. bahamense produces dormant cysts, which settle to the seafloor, forming seed beds that may initiate future blooms if favorable conditions for germination occur. From August 2015 to September 2016, the U. S. Geological Survey (USGS) and ...

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Sedimentary Data Collected in April 2016 From Old Tampa Bay, Florida (U.S. Geological Survey Field Activity Number 2016–327–FA)

The toxic dinoflagellate Pyrodinium bahamense (P. bahamense) produces recurring, persistent summer algal blooms in Old Tampa Bay, Florida, which degrade water quality and are potentially harmful to humans if contaminated shellfish is consumed. As part of its life cycle, P. bahamense produces dormant cysts, which settle to the seafloor, forming seed beds that may initiate future blooms if favorable conditions for germination occur. From August 2015 to September 2016, the U. S. Geological Survey (USGS) and ...

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Sedimentary Data Collected in February 2016 From Old Tampa Bay, Florida (U.S. Geological Survey Field Activity Number 2016–312–FA)

The toxic dinoflagellate Pyrodinium bahamense (P. bahamense) produces recurring, persistent summer algal blooms in Old Tampa Bay, Florida, which degrade water quality and are potentially harmful to humans if contaminated shellfish is consumed. As part of its life cycle, P. bahamense produces dormant cysts, which settle to the seafloor, forming seed beds that may initiate future blooms if favorable conditions for germination occur. From August 2015 to September 2016, the U. S. Geological Survey (USGS) and ...

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Sedimentary Data From Grand Bay, Alabama/Mississippi, 2014-2016 (ver. 1.1, April 2020)

This data release is an archive of sedimentary field and laboratory analytical data collected in Grand Bay, Alabama/Mississippi from 2014-2016 by scientists from the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center (USGS SPCMSC). This work, a component of the SPCMSC’s Sea-level and Storm Impacts on Estuarine Environments and Shorelines (SSIEES) project, provides the necessary data to quantify sedimentation rates and sediment sources for the marsh and estuary. The SSIEES project ...

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Sediment Core Microfossil Data Collected from the Coastal Marsh of Grand Bay National Estuarine Research Reserve, Mississippi, USA

To aid in geologic studies of sediment transport and environmental change in coastal marsh, 1-centimeter (cm) foraminiferal subsamples were taken from seven sediment push cores collected in the Grand Bay National Estuarine Research Reserve (GNDNERR), Mississippi, in October 2016. The push cores were collected along two, shore-perpendicular transects at 5, 15, 25, and 50 meters (m) from the shoreline, on opposite sides of Middle Bay during U.S. Geological Survey (USGS) Field Activities Number (FAN) 2016-358 ...

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Sedimentary Data From Grand Bay, Alabama/Mississippi, 2014-2016

This data release is an archive of sedimentary field and laboratory analytical data collected in Grand Bay, Alabama/Mississippi from 2014-2016 by scientists from the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center (USGS SPCMSC). This work, a component of the SPCMSC’s Sea-level and Storm Impacts on Estuarine Environments and Shorelines (SSIEES) project, provides the necessary data to quantify sedimentation rates and sediment sources for the marsh and estuary. The SSIEES project ...

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Benthic Foraminiferal Data from Surface Samples and Sedimentary Cores in the Grand Bay Estuary, Mississippi and Alabama

Microfossil (benthic foraminifera) samples were obtained from surficial grab (denoted with “G”) and push core (denoted with “M”) sediments collected in Grand Bay estuary, Mississippi and Alabama, to aid in the paleoenvironmental understanding of Grand Bay estuary. The data presented here were collected as part of the U.S. Geological Survey’s Sea-level and Storm Impacts on Estuarine Environments and Shorelines (SSIEES) project, and Barrier Island Evolution Research (BIER) project. Sampling was ...

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Sedimentary Data From Grand Bay, Alabama/Mississippi, 2014-2016

This data release is an archive of sedimentary field and laboratory analytical data collected in Grand Bay, Alabama/Mississippi from 2014-2016 by scientists from the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center (USGS SPCMSC). This work, a component of the SPCMSC’s Sea-level and Storm Impacts on Estuarine Environments and Shorelines (SSIEES) project, provides the necessary data to quantify sedimentation rates and sediment sources for the marsh and estuary. The SSIEES project ...

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Sedimentary Data Collected in November 2015 From Old Tampa Bay, Florida (U.S. Geological Survey Field Activity Number 2015–341–FA)

The toxic dinoflagellate Pyrodinium bahamense (P. bahamense) produces recurring, persistent summer algal blooms in Old Tampa Bay, Florida, which degrade water quality and are potentially harmful to humans if contaminated shellfish is consumed. As part of its life cycle, P. bahamense produces dormant cysts, which settle to the seafloor, forming seed beds that may initiate future blooms if favorable conditions for germination occur. From August 2015 to September 2016, the U. S. Geological Survey (USGS) and ...

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Sedimentary Data Collected in August 2015 From Old Tampa Bay, Florida (U.S. Geological Survey Field Activity Number 2015–329–FA)

The toxic dinoflagellate Pyrodinium bahamense (P. bahamense) produces recurring, persistent summer algal blooms in Old Tampa Bay, Florida, which degrade water quality and are potentially harmful to humans if contaminated shellfish is consumed. As part of its life cycle, P. bahamense produces dormant cysts, which settle to the seafloor, forming seed beds that may initiate future blooms if favorable conditions for germination occur. From August 2015 to September 2016, the U. S. Geological Survey (USGS) and ...

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Sedimentary Data From Grand Bay, Alabama/Mississippi, 2014-2016

This data release is an archive of sedimentary field and laboratory analytical data collected in Grand Bay, Alabama/Mississippi from 2014-2016 by scientists from the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center (USGS SPCMSC). This work, a component of the SPCMSC’s Sea-level and Storm Impacts on Estuarine Environments and Shorelines (SSIEES) project, provides the necessary data to quantify sedimentation rates and sediment sources for the marsh and estuary. The SSIEES project ...

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The Sedimentological Characteristics and Radiochemistry Data for the Marshes on Dauphin Island, Alabama (U.S. Geological Survey Field Activity Number 2015-322-FA)

This project is a collaborative effort between the U.S. Geological Survey (USGS), U.S. Army Corps of Engineers (USACE), and the state of Alabama funded by the National Fish and Wildlife Foundation (NFWF) to investigate viable, sustainable restoration options that protect and restore the natural resources of Dauphin Island, Alabama. Scientists from the USGS, St. Petersburg Coastal and Marine Science Center collected push cores and water quality data from the marshes of Dauphin Island, Little Dauphin Island, ...

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Raw and Normalized Foraminiferal Data for Chincoteague Bay and the Marshes of Assateague Island and the Adjacent Vicinity, Maryland and Virginia- July 2014

Foraminiferal samples were collected from Chincoteague Bay, Newport Bay, and Tom’s Cove as well as the marshes on the back-barrier side of Assateague Island and the Delmarva (Delaware-Maryland-Virginia) mainland by U.S. Geological Survey (USGS) researchers from the St. Petersburg Coastal and Marine Science Center in March, April (14CTB01), and October (14CTB02) 2014. Samples were also collected by the Woods Hole Coastal and Marine Science Center (WHCMSC) in July 2014 and shipped to the St. Petersburg ...

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Raw Foraminiferal Data for Chincoteague Bay and the Marshes of Assateague Island and the Adjacent Vicinity, Maryland and Virginia- Fall 2014

Foraminiferal samples were collected from Chincoteague Bay, Newport Bay, and Tom’s Cove as well as the marshes on the back-barrier side of Assateague Island and the Delmarva (Delaware-Maryland-Virginia) mainland by U.S. Geological Survey (USGS) researchers from the St. Petersburg Coastal and Marine Science Center in March, April (14CTB01), and October (14CTB02) 2014. Samples were also collected by the Woods Hole Coastal and Marine Science Center (WHCMSC) in July 2014 and shipped to the St. Petersburg ...

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Normalized Foraminiferal Data for Chincoteague Bay and the Marshes of Assateague Island and the Adjacent Vicinity, Maryland and Virginia- Fall 2014

Foraminiferal samples were collected from Chincoteague Bay, Newport Bay, and Tom’s Cove as well as the marshes on the back-barrier side of Assateague Island and the Delmarva (Delaware-Maryland-Virginia) mainland by U.S. Geological Survey (USGS) researchers from the St. Petersburg Coastal and Marine Science Center in March, April (14CTB01), and October (14CTB02) 2014. Samples were also collected by the Woods Hole Coastal and Marine Science Center (WHCMSC) in July 2014 and shipped to the St. Petersburg ...

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Raw Foraminiferal Data for Chincoteague Bay and the Marshes of Assateague Island and the Adjacent Vicinity, Maryland and Virginia- Spring 2014

Foraminiferal samples were collected from Chincoteague Bay, Newport Bay, and Tom’s Cove as well as the marshes on the back-barrier side of Assateague Island and the Delmarva (Delaware-Maryland-Virginia) mainland by U.S. Geological Survey (USGS) researchers from the St. Petersburg Coastal and Marine Science Center in March, April (14CTB01), and October (14CTB02) 2014. Samples were also collected by the Woods Hole Coastal and Marine Science Center (WHCMSC) in July 2014 and shipped to the St. Petersburg ...

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Normalized Foraminiferal Data for Chincoteague Bay and the Marshes of Assateague Island and the Adjacent Vicinity, Maryland and Virginia-Spring 2014

Foraminiferal samples were collected from Chincoteague Bay, Newport Bay, and Tom’s Cove as well as the marshes on the back-barrier side of Assateague Island and the Delmarva (Delaware-Maryland-Virginia) mainland by U.S. Geological Survey (USGS) researchers from the St. Petersburg Coastal and Marine Science Center in March, April (14CTB01), and October (14CTB02) 2014. Samples were also collected by the Woods Hole Coastal and Marine Science Center (WHCMSC) in July 2014 and shipped to the St. Petersburg ...

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Sedimentary Data From Grand Bay, Alabama/Mississippi, 2014-2016

This data release is an archive of sedimentary field and laboratory analytical data collected in Grand Bay, Alabama/Mississippi from 2014-2016 by scientists from the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center (USGS SPCMSC). This work, a component of the SPCMSC’s Sea-level and Storm Impacts on Estuarine Environments and Shorelines (SSIEES) project, provides the necessary data to quantify sedimentation rates and sediment sources for the marsh and estuary. The SSIEES project ...

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Sedimentary Data Collected in April 2013 From Dauphin Island and salt marshes of coastal Alabama

From April 13 to 20, 2013, scientists from the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center (USGS SPCMSC) collected push cores and vibracores on Dauphin Island, Alabama, along with push and auger cores in salt marshes at several locations in southwestern coastal Alabama. This work, a component of the SPCMSC’s Barrier Island Evolution Research (BIER) project, was conducted as part of USGS field activity number (FAN) 13BIM01. The objectives of the study were to evaluate processes ...

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Wetland Paleoecological Study of Coastal Louisiana: Surface Sediment and Diatom Calibration Dataset

Wetland sediment data was collected from coastal Louisiana as part of a pilot study to develop a diatom-based proxy for past wetland water chemistry and the identification of sediment deposits for tropical storms. The complete dataset includes forty-six surface sediment samples and nine sediment cores. The surface sediment samples were collected in fresh to brackish marsh throughout the southwest Louisiana Chenier plain and are located coincident with Coastwide Reference Monitoring System (CRMS). Sediment ...

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Wetland Paleoecological Study of Coastal Louisiana: X-radiographs

Wetland sediment data was collected from coastal Louisiana as part of a pilot study to develop a diatom-based proxy for past wetland water chemistry and the identification of sediment deposits for tropical storms. The complete dataset includes forty-six surface sediment samples and nine sediment cores. The surface sediment samples were collected in fresh to brackish marsh throughout the southwest Louisiana Chenier plain and are located coincident with Coastwide Reference Monitoring System (CRMS). Sediment ...

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Wetland Paleoecological Study of Coastal Louisiana: Sediment Cores and Diatom Samples Dataset

Wetland sediment data was collected from coastal Louisiana as part of a pilot study to develop a diatom-based proxy for past wetland water chemistry and the identification of sediment deposits for tropical storms. The complete dataset includes forty-six surface sediment samples and nine sediment cores. The surface sediment samples were collected in fresh to brackish marsh throughout the southwest Louisiana Chenier Plain and are located coincident with Coastwide Reference Monitoring System (CRMS). Sediment ...

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Benthic habitats of the coral reef ecosystem off the coast of Pu'uhonua O Honaunau (PUHO) National Historical Park

A benthic habitat polygon coverage has been created of the coral reef ecosystem off the coast of Pu'uhonua O Honaunau (PUHO) National Historical Park on the Kona Coast of Hawai'i. Polygons were hand-digitized from visual interpretation of aerial photography and SHOALS bathymetry data. We also utilized in situ knowledge from towed instruments, underwater photography and videography, and diver and snorkeler observations. The polygons have attributes for Main Structure/Substrate, Dominant Structure/Substrate, ...

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Benthic habitats of the coral reef ecosystem off the coast of Kaloko-Honokohau (KAHO) National Historical Park

A benthic habitat polygon coverage has been created of the coral reef ecosystem within and adjacent to Kaloko-Honokohau (KAHO) National Historical Park on the Kona Coast of Hawai'i. Polygons were hand-digitized from visual interpretation of aerial photography and SHOALS bathymetry data. We also utilized in situ knowledge from towed instruments, underwater photography and videography, and diver and snorkeler observations. The polygons have attributes for Main Structure/Substrate, Dominant Structure/Substrate ...

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Benthic habitats of the coral reef ecosystem off the coast of Pu'ukohola Heiau (PUHE) National Historic Site

A benthic habitat polygon coverage has been created of the coral reef ecosystem off the coast of Pu'ukohola Heiau (PUHE) National Historic Site on the Kona Coast of Hawai'i. Polygons were hand-digitized from visual interpretation of aerial photography and SHOALS bathymetry data. We also utilized in situ knowledge from towed instruments, underwater photography and videography, and diver and snorkeler observations. The polygons have attributes for Main Structure/Substrate, Dominant Structure/Substrate, Major ...

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Benthic habitat map of the U.S. Coral Reef Task Force Watershed Partnership Initiative Kaanapali priority study area and the State of Hawaii Kahekili Herbivore Fisheries Management Area, west-central Maui, Hawaii

A benthic habitat polygon coverage has been created of the coral reef ecosystem within the U.S. Coral Reef Task Force Watershed Partnership Initiative Kaanapali priority study area and the State of Hawaii Kahekili Herbivore Fisheries Management Area, West-Central Maui, Hawaii. Polygons were hand-digitized from visual interpretation of QuickBird-2 satellite imagery (2005), and SHOALS bathymetry data. We also utilized in situ knowledge from underwater photography and videography (2002-2011), side-scan sonar ...

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SECRUHAB -- Habitat polygons for Southeast Santa Cruz Island (UTM 10N, NAD83)

Benthic habitat polygon coverages have been created for marine reserve locations surrounding the Santa Barbara Basin. Diver, ROV and submersible video transects, bathymetry data, sedimentary samples, and sonar mapping, have been integrated to describe the geological, biological, and oceanographic aspects of habitat. Anacapa Reserve, is part of the Marine Ecological Reserves Research Program (MERRP). The U.S. Geological Survey (USGS), in a cooperative project with Sea Grant-MERRP and investigators at ...

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SCAV2OBS -- Assorted visual observations of benthic habitat from ROV and SCUBA dives in the Channel Islands National Marine Sanctuary. (UTM 10N, NAD83)

Point based visual observations of benthic habitat from a variety of SCUBA and ROV dives. Unknown postitional accuracy. Some video data maintained by Russ Vetter, National Marine Fisheries Service, Southwest Fisheries Science Center.

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SANPHAB -- Habitat polygons for South Anacapa Passage (UTM 10N, NAD83)

Benthic habitat polygon coverages have been created for marine reserve locations surrounding the Santa Barbara Basin. Diver, ROV and submersible video transects, bathymetry data, sedimentary samples, and sonar mapping, have been integrated to describe the geological, biological, and oceanographic aspects of habitat. Anacapa Reserve, is part of the Marine Ecological Reserves Research Program (MERRP). The U.S. Geological Survey (USGS), in a cooperative project with Sea Grant-MERRP and investigators at ...

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SANAHAB -- Benthic Habitat polygons for South Anacapa Island (UTM 10N, NAD83)

Benthic habitat polygon coverages have been created for marine reserve locations surrounding the Santa Barbara Basin. Diver, ROV and submersible video transects, bathymetry data, sedimentary samples, and sonar mapping, have been integrated to describe the geological, biological, and oceanographic aspects of habitat. Anacapa Reserve, is part of the Marine Ecological Reserves Research Program (MERRP). The U.S. Geological Survey (USGS), in a cooperative project with Sea Grant-MERRP and investigators at ...

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NANPHAB -- Benthic Habitat polygons for North Anacapa Passage (UTM 10N, NAD83)

Benthic habitat polygon coverages have been created for marine reserve locations surrounding the Santa Barbara Basin. Diver, ROV and submersible video transects, bathymetry data, sedimentary samples, and sonar mapping, have been integrated to describe the geological, biological, and oceanographic aspects of habitat. Anacapa Reserve, is part of the Marine Ecological Reserves Research Program (MERRP). The U.S. Geological Survey (USGS), in a cooperative project with Sea Grant-MERRP and investigators at ...

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Benthic habitats of the coral reef ecosystem on the south shore of Moloka'i

A benthic habitat polygon coverage has been created of the coral reef ecosystem on the south shore of Moloka'i. Polygons were hand-digitized from visual interpretation of aerial photography and SHOALS bathymetry data. We also utilized in situ knowledge from towed instruments, underwater photography and videography, and diver and snorkeler observations. The polygons have attributes for Main Structure/Substrate, Dominant Structure/Substrate, Major Biological Cover, Percent of Major Biological Cover, Reef Zone ...

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SVANHAB -- Habitat polygons for the nearshore Point Arguello study area, South Vandenberg Reserve

Benthic habitat polygon coverages have been created for marine reserve locations surrounding the Santa Barbara Basin. Diver, ROV and submersible video transects, bathymetry data, sedimentary samples, and sonar mapping, have been integrated to describe the geological, biological, and oceanographic aspects of habitat. The U.S. Geological Survey (USGS), in a cooperative project with Sea Grant-MERRP and investigators at National Marine Fisheries Service (NMFS), the Channel Islands National Marine Sanctuary ...

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SMIGHAB -- Habitat polygons for the nearshore San Miguel Island, Channel Islands NMS

Benthic habitat polygon coverages have been created for marine reserve locations surrounding the Santa Barbara Basin. Diver, ROV and submersible video transects, bathymetry data, sedimentary samples, and sonar mapping, have been integrated to describe the geological, biological, and oceanographic aspects of habitat. The U.S. Geological Survey (USGS), in a cooperative project with Sea Grant-MERRP and investigators at National Marine Fisheries Service (NMFS), the Channel Islands National Marine Sanctuary ...

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NANAHAB -- Habitat polygons for the nearshore North Anacapa Island, Channel Islands NMS

Benthic habitat polygon coverages have been created for marine reserve locations surrounding the Santa Barbara Basin. Diver, ROV and submersible video transects, bathymetry data, sedimentary samples, and sonar mapping, have been integrated to describe the geological, biological, and oceanographic aspects of habitat. Anacapa Reserve, is part of the Marine Ecological Reserves Research Program (MERRP). The U.S. Geological Survey (USGS), in a cooperative project with Sea Grant-MERRP and investigators at ...

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BSYCHAB -- Habitat polygons for the Big Sycamore reserve area

Benthic habitat polygon coverages have been created for marine reserve locations surrounding the Santa Barbara Basin. Diver, ROV and submersible video transects, bathymetry data, sedimentary samples, and sonar mapping, have been integrated to describe the geological, biological, and oceanographic aspects of habitat. Big Sycamore reserve, is part of the Marine Ecological Reserves Research Program (MERRP). The U.S. Geological Survey (USGS), in a cooperative project with Sea Grant-MERRP and investigators at ...

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Census counts of benthic foraminifera, environmental parameters (temperature, salinity, and oxygen concentration), and radiocarbon measurements from cores obtained under and near a whale-fall off western Vancouver Island, British Columbia, Canada

This data release provides census counts of benthic foraminifera (in percent for the total fauna and as raw counts for just the living specimens) as well as environmental parameters (temperature, salinity, and oxygen concentration) at the sampling sites, and radiocarbon measurements from selected push core samples obtained under and near a whale-fall off western Vancouver Island, British Columbia, Canada.

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Eelgrass distributions derived from a towed underwater video survey of the Nisqually River delta, 2017

This portion of the USGS data release presents eelgrass distributions derived from towed underwater video surveys of the Nisqually River delta, Washington in 2017 (USGS Field Activity Number 2017-614-FA). Eelgrass data were collected from the R/V George Davidson equipped with a towed underwater video system and global navigation satellite system (GNSS) receiver. The underwater video system consisted of a Splashcam standard definition video camera connected to a Sony GV-D1000 video monitor and tape recorder. ...

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Eelgrass distributions derived from a towed underwater video survey of the Nisqually River delta, 2014

This portion of the USGS data release presents eelgrass distributions derived from towed underwater video surveys of the Nisqually River delta, Washington in 2014 (USGS Field Activity Number D-01-14-PS). Eelgrass data were collected from the R/V George Davidson equipped with a towed underwater video system and global navigation satellite system (GNSS) receiver. The underwater video system consisted of a Splashcam standard definition video camera connected to a Sony GV-D1000 video monitor and tape recorder. ...

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Eelgrass distributions derived from a towed underwater video survey of the Nisqually River delta, 2012

This portion of the USGS data release presents eelgrass distributions derived from towed underwater video surveys of the Nisqually River delta, Washington in 2012 (USGS Field Activity Number D-01-12-PS). Eelgrass data were collected from the R/V George Davidson equipped with a towed underwater video system and global navigation satellite system (GNSS) receiver. The underwater video system consisted of a Splashcam standard definition video camera connected to a Sony GV-D1000 video monitor and tape recorder. ...

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Invertebrate remains from the Dominican University of California archaeological site MRN-CA-254, Marin County, California

This data release indicates faunal presence or absence of shelly artifacts (invertebrate remains) from the Dominican University of California archaeological site MRN-CA-254, Marin County, California.

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Still-image frame grabs and benthic habitat interpretation of underwater video footage, March 2014, Faga`alu Bay, American Samoa

Underwater video was collected in March 2014 in the nearshore waters of Faga`alu Bay on the island of Tutuila, American Samoa, as part of the U.S. Geological Survey Coastal and Marine Geology Program's Pacific Coral Reefs Project. This dataset includes 2,119 still images extracted from the video footage every 10 seconds and an Environmental Systems Research Institute (ESRI) shapefile of individual still-image locations with benthic habitat interpretations for each image.

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Geochemical analysis of authigenic carbonates and chemosynthetic mussels at Atlantic Margin seeps (ver. 2.0, March 2019)

Isotopic analyses of authigenic carbonates and methanotrophic deep-sea mussels, Bathymodiolus sp., was performed on samples collected from seep fields in the Baltimore and Norfolk Canyons on the north Atlantic margin. Samples were collected using remotely operated underwater vehicles (ROVs) during three different research cruises in 2012, 2013, and 2015. Analyses were performed by several different laboratories, and the results are presented in spreadsheet format.

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Terrestrial invertebrate abundance in the Elwha River estuary, Washington, in 2007 and 2013.

This portion of the data release presents terrestrial invertebrate abundance data from samples collected in emergent and shrub vegetation along the edge of the Elwha River estuary, Washington, in 2007 and 2013 (no associated USGS Field Activities numbers because data were collected predominantly by biologists from the Lower Elwha Klallam Tribe). We deployed terrestrial insect fallout traps at ten locations in the east estuary, five replicates each in shrub and emergent (littoral) vegetation habitats. Clear, ...

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Diet of Chinook and coho salmon in the Elwha River estuary, Washington, before and during dam removal

This portion of the data release presents fish diet data from Chinook and coho salmon collected in the Elwha River estuary, Washington, in 2006, 2007, 2013, and 2014 (there are no associated USGS Field Activities numbers because data were collected predominantly by biologists from the Lower Elwha Klallam Tribe). Fish were collected using a beach seine at six locations throughout the estuary. Fish were transferred to buckets containing aerated ambient water and kept cool until handling. We anesthetized fish ...

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Fish abundance in the Elwha River estuary, Washington, from 2006 to 2014

This portion of the data release presents fish abundance data from samples collected in the Elwha River estuary, Washington, in 2006, 2007, 2013, and 2014 (no associated USGS Field Activities numbers because data were collected predominantly by biologists from the Lower Elwha Klallam Tribe). We used the Puget Sound beach seining protocol (Simenstad and others, 1991) to sample fish populations in the Elwha River estuary complex. The beach seine was 38 m long x 2 m deep, with a 2 m x 2 m bag in the center of ...

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Aquatic invertebrate abundance in the Elwha River estuary, Washington, in 2007 and 2013

This portion of the data release presents aquatic invertebrate abundance data from samples collected in the Elwha River estuary, Washington, in 2007 and 2013 (no associated USGS Field Activities numbers because data were collected predominantly by biologists from the Lower Elwha Klallam Tribe). Replicate benthic samples were collected at 18 locations throughout the estuary complex using a petite Ponar grab sampler (appx. 2400 mL sample) and sorted through a 500-micron sieve. Samples were fixed in 10 percent ...

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Underwater video footage, March 2014, Faga'alu Bay, Tutuila Island, American Samoa

Underwater video imagery was collected in March 2014 in the nearshore waters of Faga'alu Bay on the Island of Tutuila, American Samoa, as part of the U.S. Geological Survey Coastal and Marine Geology Program's Pacific Coral Reefs Project. Included here are 40 video files in .mpg format and an Environmental Systems Research Institute (ESRI) shapefile with location (navigation) points every two seconds.

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Coastal Marine Geology Program Video and Photograph Portal

Access to the U.S. Geological Survey (USGS) Coastal and Marine Geology Program’s (CMGP) vast collection of unique and valuable seafloor and coastal imagery is made available in the CMGP Video and Photograph Portal. The portal provides a single location for data discovery and viewing. The CMGP and our research partners invest immense resources collecting, processing, and archiving seafloor and oblique coastal video and photographs. Until the publication of the CMGP Video and Photograph Portal in 2015, only ...

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Late Holocene and Living Coral Composition of Pompano Ridge, FL

Pompano Ridge is a coral reef located on the southeast Florida nearshore ridge complex, ~600 meters (m) off the coast of northern Broward County in southeast Florida (26°13’ North, 80°5’ West). This data release compiles data collected on the late Holocene and living coral composition of Pompano Ridge. The data are described in detail in Modys and others (in prep). The samples were collected under Scientific Activity Licenses (SAL) from the Florida Fish and Wildlife Conservation Commission (SAL-18-1650 ...

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Sr/Ca and linear extension data for a modern Orbicella faveolata coral from Marquesas Keys, Florida, USA

This data release contains new subannual Strontium/Calcium (Sr/Ca) and annual linear extension records from a colony of the massive coral, Orbicella faveolata. The colony was collected live from the Marquesas Keys, Florida (FL) in August 1980 from core MK1. The coral Sr/Ca paleothermometer can provide a powerful proxy for centennial-scale sea-surface temperature (SST) variability in the Caribbean/Atlantic Ocean region.

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Presence of Microbes and the Distribution of Climatic, Environmental, and Geochemical Variables Web Mapping Application

This web application dataset includes data collected by the U.S. Geological Survey (USGS) as well as environmental climatic, geochemical, and mineralogical variables from various sources. NOTE: This web application is no longer being supported, and has been removed from ArcGIS Online as of September 30, 2023. Please see the Process Steps of this metadata record for more information. Layers include: U.S. Boundary Layers (States, Counties, Watersheds, and EPA Regions), Bacillus anthracis PCR results (rpoB, ...

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Globorotalia truncatulinoides Sediment Trap Data in the Gulf of Mexico

Modern observations of planktic foraminifera from sediment trap studies help to constrain the regional ecology of paleoceanographically valuable species. Results from a weekly-resolved sediment trap time series (2008–2014) in the northern Gulf of Mexico demonstrate that 92% of Globorotalia truncatulinoides flux occurs in winter (January, February, and March), and that encrusted and non-encrusted individuals represent calcification in distinct depth habitats. Individual foraminiferal analysis (IFA) of G. ...

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2008-2017 Globigerinoides ruber Sediment Trap Data Collected from the Gulf of Mexico

This data release includes results of a high-resolution (1–2 weeks) and long-term sediment trap time series collected from the northern Gulf of Mexico. This dataset allows for a detailed assessment of the seasonal distribution, size, morphological variability and geochemistry of co-occurring pink and white chromotypes of the shallow-water foraminifera, Globigerinoides ruber. The flux of both chromotypes is highly correlated, and both represent mean annual conditions in the marine surface mixed layer. ...

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Functional gene microarray data from cold-water corals (Acanthogorgia spp., Desmophyllum dianthus, Desmophyllum pertusum, and Enallopsammia profunda) from the Atlantic Ocean off the Southeast Coast of the United States–Raw Data and Sample Site Information

The files in this data release (Kellogg and Voelschow, 2023) contain normalized microarray probe intensity values from GeoChip 5.0S microarrays referenced in the journal article entitled “Functional gene composition and metabolic potential of deep-sea coral-associated microbial communities” by Pratte and others (2023). The GeoChip 5.0S microarrays, provided by Glomics Inc., contain 57,498 oligonucleotide probes that target 383 microbial (archaeal, bacterial, and fungal) genes and cover 151,797 coding ...

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Gulf of Mexico Sediment Trap Foraminifera Data

The U.S. Geological Survey (USGS) deployed a sediment trap (McLane PARFLUX 78H) mooring in the northern Gulf of Mexico (27.5 °N and 90.3°W, water depth 1150 meters [m]) in January 2008 to collect seasonal time-series data on the flux and assemblage composition of planktic foraminifers. The trap was positioned in the water column at a depth of 700 m on the mooring cable to enable the collection of deeper dwelling species of planktic foraminifera. The trap contains 21 collection cups that were programmed to ...

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Census counts of palynomorphs from core 721-1 obtained in 2002 off San Francisquito Creek in South San Francisco Bay

This data release provides census counts of palynomorphs in sediments of a core obtained off San Francisquito Creek in South San Francisco Bay.

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Census counts of benthic foraminifera from core 721-1 obtained in 2002 off San Francisquito Creek in South San Francisco Bay

This data release provides census counts of benthic foraminifera in sediments of a core obtained off San Francisquito Creek in South San Francisco Bay.

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Census counts of diatoms from core 721-1 obtained in 2002 off San Francisquito Creek in South San Francisco Bay

This data release provides census counts of diatoms in sediments of a core obtained off San Francisquito Creek in South San Francisco Bay.

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Slope Values Across Marsh-Forest Boundary in Chesapeake Bay Region, USA

The marsh-forest boundary in the Chesapeake Bay was determined by geoprocessing high-resolution (1 square meter) land use and land cover data sets. Perpendicular transects were cast at standard intervals (30 meters) along the boundary within a GIS by repurposing the Digital Shoreline Analysis System (DSAS) Version 5.0, an ArcGIS extension developed by the U.S. Geological Survey. Average and maximum slope values were assigned to each transect from surface elevation data. The same values were also provided as ...

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Sedimentologic Data from Point aux Chenes Marsh and Estuary, Mississippi (21CCT02)

Sediment samples, including marsh and estuarine surface samples and marsh push and peat-auger cores, were collected from Point aux Chenes, Mississippi from October 23-26, 2018, and August 4, 2021. Marsh surface samples (top 1 centimeter (cm) of sediment; sample names appended with S), marsh push cores (core names appended with M) and peat-auger cores (core names appended with R) were collected along 50-meter (m), shore perpendicular, transects identified as sites 5, 6, 7, and 9. All samples in the dataset ...

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Sedimentologic Data from Point aux Chenes Marsh and Estuary, Mississippi (18CCT09)

Sediment samples, including marsh and estuarine surface samples and marsh push and peat-auger cores, were collected from Point aux Chenes, Mississippi from October 23-26, 2018, and August 4, 2021. Marsh surface samples (top 1 centimeter (cm) of sediment; sample names appended with S), marsh push cores (core names appended with M) and peat-auger cores (core names appended with R) were collected along 50-meter (m), shore perpendicular, transects identified as sites 5, 6, 7, and 9. All samples in the dataset ...

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Prokaryotic Communities Shed by Diseased and Healthy Corals (Diploria labyrinthiformis, Pseudodiploria strigosa, Montastraea cavernosa, Colpophyllia natans, and Orbicella faveolata) into Filtered Seawater Mesocosms – Raw and Processed Data

The files in this data release (Kellogg and others, 2023) are those referenced in the journal article by Evans and others (2023) entitled “Investigating microbial size classes associated with the transmission of stony coral tissue loss disease (SCTLD).” They contain an amplicon sequence variant (ASV) table and the raw 16S rRNA gene amplicon files from fifty-six 0.22-micrometer (µm) pore size filters, as well as six reagent blanks, three mock communities, and a 0.22-µm-filtered ultraviolet (UV)-treated ...

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Collection locations of sediment cores from the New England Mud Patch collected on USGS Field Activity 2016-001-FA

Variability in sediment properties with depth and the thickness of individual sedimentary layers are critical determinants of seabed acoustic response. The New England Mud Patch (NEMP), located south of Cape Cod, is an unusual feature on the U.S. Continental Shelf in that it is composed of fine-grained sediment layers containing a relatively-homogeneous mix of sand, silt, and clay-sized particles bounded by more typical sandy shelf sediments. The unique characteristics and nature of this deposit is due to ...

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Underwater video observations offshore of Tacoma, Washington

This part of USGS Data Series 935 (Cochrane, 2014) presents observations from underwater video collected in the Offshore of Tacoma, Washington, map area, a part of the Southern Salish Sea Map Series. To validate the interpretations of sonar data in order to turn it into geologically and biologically useful information, the U.S. Geological Survey (USGS) towed a camera sled over specific locations throughout the Tacoma map area to collect video and photographic data that would “ground truth” the seafloor. ...

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Underwater video observations offshore of Burien, Washington

This part of USGS Data Series 935 (Cochrane, 2014) presents observations from underwater video collected in the Offshore of Burien, California, map area, a part of the Southern Salish Sea Habitat Map Series. To validate the interpretations of multibeam sonar data and turn it into geologically and biologically useful information, the U.S. Geological Survey (USGS) towed a camera sled over specific locations throughout the Seattle map area to collect video and photographic data that would “ground truth” the ...

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Cold-water coral microbiomes (Anthothela spp.) from Baltimore and Norfolk Canyons: raw and processed data

The files included in this data release are the raw and processed deoxyribonucleic acid (DNA) sequence files referenced in the journal article by Lawler and others (2016) entitled “Coral-Associated Bacterial Diversity is Conserved Across Two Deep-Sea Anthothela Species”. They represent a 16S rRNA gene amplicon survey of cold-water corals (Anthothela spp.) microbiomes completed using Roche 454 pyrosequencing with titanium reagents. The samples used in this study were collected from cold-water corals ...

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Assateague Island Seabeach Amaranth Survey Data — 2001 to 2018

Seabeach amaranth (Amaranthus pumilus) is a federally threatened plant species that was once prevalent on beaches of the U.S. mid-Atlantic coast. For much of the 20th century, seabeach amaranth was absent and thought to be extinct along this coast presumably due to development and recreational pressure. Few plants were observed over much of the 20th century and the species was federally listed as endangered in 1993. To re-establish a population, the Natural Resources staff at Assateague Island National ...

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Tall Sea Pens--Santa Barbara Channel, California

This part of DS 781 presents data for the map showing the predicted distribution of tall sea pens in the Santa Barbara Channel, California, region. The raster data file is included in "TallSeaPens_SantaBarbaraChannel.zip," which is accessible from https://pubs.usgs.gov/ds/781/SantaBarbaraChannel/data_catalog_SantaBarbaraChannel.html. Presence-absence data of benthic macro-invertebrates and associated habitat (that is, sediment type and depth) were collected using a towed camera sled in selected areas along ...

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Short Sea Pens--Santa Barbara Channel, California

This part of DS 781 presents data for the map showing the predicted distribution of short sea pens in the Santa Barbara Channel, California, region. The raster data file is included in "ShortSeaPens_SantaBarbaraChannel.zip," which is accessible from https://pubs.usgs.gov/ds/781/SantaBarbaraChannel/data_catalog_SantaBarbaraChannel.html. Presence-absence data of benthic macro-invertebrates and associated habitat (that is, sediment type and depth) were collected using a towed camera sled in selected areas ...

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Hydroids--Santa Barbara Channel, California

This part of DS 781 presents data for the map showing the predicted distribution of hydroids in the Santa Barbara Channel, California, region. The raster data file is included in "Hydroids_SantaBarbaraChannel.zip," which is accessible from https://pubs.usgs.gov/ds/781/SantaBarbaraChannel/data_catalog_SantaBarbaraChannel.html. Presence-absence data of benthic macro-invertebrates and associated habitat (that is, sediment type and depth) were collected using a towed camera sled in selected areas along the ...

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Cup Corals--Santa Barbara Channel, California

This part of DS 781 presents data for the map showing the predicted distribution of cup corals in the Santa Barbara Channel, California, region. The raster data file is included in "CupCorals_SantaBarbaraChannel.zip," which is accessible from https://pubs.usgs.gov/ds/781/SantaBarbaraChannel/data_catalog_SantaBarbaraChannel.html. Presence-absence data of benthic macro-invertebrates and associated habitat (that is, sediment type and depth) were collected using a towed camera sled in selected areas along the ...

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Brittle Stars--Santa Barbara Channel, California

This part of DS 781 presents data for the map showing the predicted distribution of brittle stars in the Santa Barbara Channel, California, region. The raster data file is included in "BrittleStars_SantaBarbaraChannel.zip," which is accessible from https://pubs.usgs.gov/ds/781/SantaBarbaraChannel/data_catalog_SantaBarbaraChannel.html. Presence-absence data of benthic macro-invertebrates and associated habitat (that is, sediment type and depth) were collected using a towed camera sled in selected areas ...

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C109NC_video_observations

This part of DS 781 presents video observations from cruise C109NC in northern California. The vector data file is included in "c109nc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. In 2006 and 2007, the seafloor in northern California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB), using both multibeam echosounders and bathymetric sidescan sonar units. This mapping mission ...

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Benthic Biological Interpretation for California Seafloor Mapping Project

This part of DS 781 presents benthic biological observations of the California coast in support of the California Seafloor Mapping Project. A shapefile and corresponding comma-delimited text file are included in "Benthic_Biological_Interpretation.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html.

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Static chamber gas fluxes and carbon and nitrogen isotope content of age-dated sediment cores from a Phragmites wetland in Sage Lot Pond, Massachusetts, 2013-2015

Coastal wetlands are major global carbon sinks; however, quantification of carbon flux can be difficult in these heterogeneous and dynamic ecosystems. To characterize spatial and temporal variability in a New England salt marsh, static chamber measurements of greenhouse gas (GHG) fluxes were compared among major plant-defined zones (high marsh dominated by Distichlis spicata and a zone of invasive Phragmites australis) during 2013 and 2014 growing seasons. Two sediment cores were collected in 2015 from the ...

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Landscape and vegetation photos and ground truthing data collected on North Core Banks, NC in October 2022

These data map in high detail surficial cross-sections of North Core Banks, a barrier island in Cape Lookout National Seashore, NC, in October 2022. U.S. Geological Survey field efforts are part of an interagency agreement with the National Park Service to monitor the recovery of the island from Hurricanes Florence (2018) and Dorian (2019). Three sites of outwash, overwash, and pond formation were targeted for extensive vegetation ground-truthing, sediment samples, bathymetric mapping with a remote ...

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z206sc_video_observations

This part of DS 781 presents video observations from cruise Z206SC in southern California. The vector data file is included in "z206sc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. Between 2006 and 2007, the seafloor in southern California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), using both multibeam echosounders and bathymetric ...

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z107sc_video_observations

This part of DS 781 presents video observations from cruise Z107SC in southern California. The vector data file is included in "z107sc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. Between 2006 and 2007, the seafloor southern California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), using both multibeam echosounders and bathymetric ...

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sw109sc_video_observations

This part of DS 781 presents video observations from cruise SW109SC for the Santa Barbara Channel region and beyond in southern California. The vector data file is included in "sw109sc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. Between 2006 and 2007, the seafloor in southern California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), ...

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S2210MB_video_observations

This part of DS 781 presents video observations from cruise S2210MB in northern California. The vector data file is included in "s2210mb_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. In 2006 and 2009, the seafloor in central California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), using both multibeam echosounders and bathymetric ...

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s1c08sc_video_observations

This part of DS 781 presents video observations from cruise S1C08SC for the Santa Barbara Channel region and beyond in southern California. The vector data file is included in "s1c08sc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. Between 2006 and 2007, the seafloor southern California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), using ...

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L908NC_video_observations

This part of DS 781 presents video observations from cruise L908NC for northern California. The vector data file is included in "l908nc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. Between 2006 and 2007, the seafloor in central California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), using both multibeam echosounders and bathymetric ...

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F307NC_video_observations

This part of DS 781 presents video observations from cruise F307NC in northern California The vector data file is included in "f307nc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. Between 2006 and 2007, the seafloor in northern California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), using both multibeam echosounders and bathymetric ...

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F208NC_video_observations

This part of DS 781 presents video observations from cruise F208NC in northern California. The vector data file is included in "f208nc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. Between 2006 and 2007, the seafloor in central California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), using both multibeam echosounders and bathymetric ...

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C210NC_video_observations

This part of DS 781 presents video observations from cruise C210NC in northern California. The vector data file is included in "c201nc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. In 2010, the seafloor in northern California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) using both multibeam echosounders and bathymetric sidescan sonar units. This mapping mission collected ...

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C0212SC_video_observations

This part of DS 781 presents video observations from cruise C0212SC in southern California. The vector data file is included in "c0212sc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. In 2006 and 2009, the seafloor in central California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), using both multibeam echosounders and bathymetric ...

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C0111SC_video_observations

This part of DS 781 presents video observations from cruise C0111SC in southern California. The vector data file is included in "c0111sc_video_observations.zip," which is accessible from https://pubs.usgs.gov/ds/781/video_observations/data_catalog_video_observations.html. In 1999 and 2009, the seafloor in southern California was mapped by California State University, Monterey Bay, Seafloor Mapping Lab (CSUMB) and by the U.S. Geological Survey (USGS), using both multibeam echosounders and bathymetric ...

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Underwater video observations offshore of Seattle, Washington

This part of USGS Data Series 935 (Cochrane, 2014) presents observations from underwater video collected in the Offshore of Seattle, California, map area, a part of the Southern Salish Sea Habitat Map Series. To validate the interpretations of multibeam sonar data and turn it into geologically and biologically useful information, the U.S. Geological Survey (USGS) towed a camera sled over specific locations throughout the Seattle map area to collect video and photographic data that would “ground truth” ...

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Physicochemical measurements of the coastal aquifer and coastal groundwater discharge on Kalaupapa, Moloka'i, Hawaii

This data table includes in-situ near-shore seawater measurements of excess radon (Rn-222), tide and crater lake water levels and salinity collected in Kalaupapa, Moloka'i, Hawaii.

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Prokaryotic Communities From Marine Biofilms Formed on Stainless Steel Plates in Coral Mesocosms – Raw and Processed Data

The files in this data release (Kellogg and others, 2022) are those referenced in the journal article by Evans and others (2022) entitled “Biofilms as Potential Reservoirs of Stony Coral Tissue Loss Disease.” They contain an amplicon sequence variant (ASV) table and the raw 16S ribosomal ribonucleic acid (rRNA) gene amplicon deoxyribonucleic acid (DNA) sequence files from 15 microbial communities (sample names: CnD16B, CnD17B, CnD18B, CnD19B, CnD21B, CnD22B, CnD23B, CnD24B, CnD25B, PsD5B, CnH101B, ...

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Pharmaceuticals and personal care products measured in passive samplers at seven coastal sites off West Maui during February and March 2017

Passive membrane samplers—semipermeable membrane devices and polar organic chemical integrative samplers—were deployed for 22 continuous days at 7 sites along the West Maui, Hawai'i, coastline in February and March 2017 to assess organic contaminants at shallow coral reef ecosystems from diverse upstream inputs.

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Mammal Observations-Oregon OCS Floating Wind Farm Site

This part of the Oregon OCS Data Release presents marine mammal observations from U.S. Geological Survey (USGS) field activity 2014-607-FA in the Oregon Outer continental Shelf (OCS)Floating Wind Farm survey area. The survey was conducted using 12 hour day operations out of Charleston Harbor near Coos Bay, Oregon. The cruise plan consisted of 23 days on site split between sonar mapping and video ground truth surveying. Activities parsed out to nine days of sonar mapping, three days of video surveying, eight ...

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Geologic Observations-Oregon OCS Floating Wind Farm Site

This part of the Oregon Outer Continental Shelf (OCS) Floating Windfarm Suite Data Release presents geological observations from video collected on U.S. Geological Survey (USGS) field activity 2014-607-FA in the Floating Wind Farm survey area. The survey was conducted using 12 hour day operations out of Charleston Harbor near Coos Bay, Oregon. The cruise plan consisted of 23 days on site split between sonar mapping and video ground truth surveying. Activities parsed out to nine days of sonar mapping, three ...

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St. Petersburg Coastal and Marine Science Center's Geologic Core and Sample Database Metadata

This database contains a comprehensive inventory of geologic (coral, coral reef, limestone, and sediment) cores and samples collected, analyzed, published, and/or archived by, or in collaboration with, the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center (USGS SPCMSC). The SPCMSC Geologic Core and Sample Database includes geologic cores and samples collected beginning in the 1970s to present day, from study sites across the world. This database captures metadata about samples ...

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Globorotalia truncatulinoides Trace Element Geochemistry (Barium, Magnesium, Strontium, Manganese, and Calcium) from the Gulf of Mexico Sediment Trap

Observations of elevated barium-to-calcium ratio (Ba/Ca) in Globorotalia truncatulinoides have been attributed to contaminant phases, deep calcification depth and diagenetic processes. U.S. Geological Survey (USGS) scientists and their collaborators investigated intra- and inter-test Ba/Ca variability in the non-spinose planktic foraminifer, G. truncatulinoides, from a sediment trap time series (2009-2017) in the northern Gulf of Mexico (generally 27.5°N and 90.3°W) to gain insights into the environmental ...

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